RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 IGLV4-3A0A075B6K6 122 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 IGHV4-4A0A075B6R2 117 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 ETDCA0A1B0GVM5 59 aa9.49□□□□□ -0.89
DNMT1-228ENST00000592705 JMJD7-PLA2G4BH0Y9G9 81 aa9.48□□□□□ -0.89
DNMT1-228ENST00000592705 UBE2AP49459 152 aa9.48□□□□□ -0.89
DNMT1-228ENST00000592705 CNFNQ9BYD5 112 aa9.48□□□□□ -0.89
DNMT1-228ENST00000592705 TRAV26-1A0A087WT03 109 aa9.48□□□□□ -0.89
DNMT1-228ENST00000592705 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
DNMT1-228ENST00000592705 LECT2O14960 151 aa9.48□□□□□ -0.89
DNMT1-228ENST00000592705 TRBV27A0A0K0K1C4 114 aa9.47□□□□□ -0.89
DNMT1-228ENST00000592705 URB1-AS1Q96HZ7 61 aa9.47□□□□□ -0.89
DNMT1-228ENST00000592705 NUPR2A6NF83 97 aa9.47□□□□□ -0.89
DNMT1-228ENST00000592705 C11orf21Q9P2W6 132 aa9.47□□□□□ -0.89
DNMT1-228ENST00000592705 NDUFA1O15239 70 aa9.46□□□□□ -0.89
DNMT1-228ENST00000592705 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
DNMT1-228ENST00000592705 MRPS12O15235 138 aaKnown RBP9.46□□□□□ -0.9
DNMT1-228ENST00000592705 LINC00467Q9BRT7 94 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 NACAE9PAV3 2078 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 A0A1B0GX51 115 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 CRYGDP07320 174 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 RNASE3P12724 160 aaKnown RBP9.45□□□□□ -0.9
DNMT1-228ENST00000592705 HIST2H2BDQ6DRA6 164 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 LINC00643Q86TS7 51 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 KIR2DL5BQ8NHK3 375 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 PYGO1Q9Y3Y4 419 aa9.45□□□□□ -0.9
DNMT1-228ENST00000592705 PRR9Q5T870 116 aa9.44□□□□□ -0.9
DNMT1-228ENST00000592705 IGLV2-18A0A075B6J9 118 aa9.44□□□□□ -0.9
DNMT1-228ENST00000592705 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
DNMT1-228ENST00000592705 CDKN2A-AS1Q9UH64 79 aa9.44□□□□□ -0.9
DNMT1-228ENST00000592705 C7orf33Q8WU49 177 aa9.44□□□□□ -0.9
DNMT1-228ENST00000592705 H7C423 109 aa9.43□□□□□ -0.9
DNMT1-228ENST00000592705 M0R2N4 97 aa9.43□□□□□ -0.9
DNMT1-228ENST00000592705 MT-ATP8P03928 68 aa9.43□□□□□ -0.9
DNMT1-228ENST00000592705 Q6ZTI0 123 aa9.43□□□□□ -0.9
DNMT1-228ENST00000592705 KLLNB2CW77 178 aa9.43□□□□□ -0.9
DNMT1-228ENST00000592705 TMEM256-PLSCR3K7ERE1 68 aa9.42□□□□□ -0.9
DNMT1-228ENST00000592705 CFAP126Q5VTH2 177 aa9.42□□□□□ -0.9
DNMT1-228ENST00000592705 NCR3O14931 201 aa9.42□□□□□ -0.9
DNMT1-228ENST00000592705 TEX49A0A1B0GTD5 131 aa9.42□□□□□ -0.9
DNMT1-228ENST00000592705 GAS8-AS1O95177 125 aa9.42□□□□□ -0.9
DNMT1-228ENST00000592705 SETD2Q9BYW2 2564 aaPredicted RBP9.42□□□□□ -0.9
DNMT1-228ENST00000592705 NHLRC4P0CG21 123 aaPredicted RBP9.41□□□□□ -0.9
DNMT1-228ENST00000592705 POLR2KP53803 58 aaKnown RBP9.41□□□□□ -0.9
DNMT1-228ENST00000592705 SMIM20Q8N5G0 67 aa9.41□□□□□ -0.9
DNMT1-228ENST00000592705 PSMB8P28062 276 aa9.41□□□□□ -0.9
DNMT1-228ENST00000592705 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
DNMT1-228ENST00000592705 TRIAP1O43715 76 aa9.41□□□□□ -0.9
DNMT1-228ENST00000592705 TSHBP01222 138 aa9.41□□□□□ -0.9
DNMT1-228ENST00000592705 FUSP35637 526 aaKnown RBP eCLIP9.41□□□□□ -0.9
DNMT1-228ENST00000592705 SPAG11BQ08648 103 aa9.41□□□□□ -0.9
DNMT1-228ENST00000592705 PLXNB1O43157 2135 aa9.41□□□□□ -0.9
DNMT1-228ENST00000592705 LINC00308Q8TCZ7 52 aa9.4□□□□□ -0.9
DNMT1-228ENST00000592705 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
DNMT1-228ENST00000592705 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.9
DNMT1-228ENST00000592705 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.91
DNMT1-228ENST00000592705 hADV29S1A0JD25 119 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 LRCOL1A6NCL2 159 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 TIMM17BO60830 172 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 IGHV4-30-4P0DP06 118 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 C9orf85Q96MD7 179 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 COX8CQ7Z4L0 72 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 AVPP01185 164 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
DNMT1-228ENST00000592705 F8P00451 2351 aa9.39□□□□□ -0.91
DNMT1-228ENST00000592705 EML5Q05BV3 1969 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 EXPH5Q8NEV8 1989 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 IGLV1-40P01703 118 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 DIRC1Q969H9 104 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 PKD1L2Q7Z442 2459 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 IGHV4-28A0A0C4DH34 117 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 C14orf132Q9NPU4 83 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 PDE6GP18545 87 aa9.38□□□□□ -0.91
DNMT1-228ENST00000592705 J3KT08 172 aa9.37□□□□□ -0.91
DNMT1-228ENST00000592705 TMEM258P61165 79 aa9.37□□□□□ -0.91
DNMT1-228ENST00000592705 TANC2Q9HCD6 1990 aa9.37□□□□□ -0.91
DNMT1-228ENST00000592705 PROK1P58294 105 aa9.37□□□□□ -0.91
DNMT1-228ENST00000592705 IBA57-AS1B1ANH7 110 aa9.36□□□□□ -0.91
DNMT1-228ENST00000592705 DCANP1Q8TF63 244 aa9.36□□□□□ -0.91
DNMT1-228ENST00000592705 NREPQ16612 68 aa9.36□□□□□ -0.91
DNMT1-228ENST00000592705 UFSP1Q6NVU6 142 aa9.36□□□□□ -0.91
DNMT1-228ENST00000592705 TRBV6-4A0A1B0GX49 114 aa9.35□□□□□ -0.91
DNMT1-228ENST00000592705 IGIPA6NJ69 53 aa9.35□□□□□ -0.91
DNMT1-228ENST00000592705 C16orf95Q9H693 158 aa9.35□□□□□ -0.91
DNMT1-228ENST00000592705 A0A0J9YWU9 116 aa9.34□□□□□ -0.91
DNMT1-228ENST00000592705 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-228ENST00000592705 FSHBP01225 129 aa9.34□□□□□ -0.91
DNMT1-228ENST00000592705 UBE2D4Q9Y2X8 147 aa9.34□□□□□ -0.91
DNMT1-228ENST00000592705 MRPS36P82909 103 aaKnown RBP9.34□□□□□ -0.91
DNMT1-228ENST00000592705 B9D2Q9BPU9 175 aa9.34□□□□□ -0.91
DNMT1-228ENST00000592705 Q6ZS46 218 aa9.33□□□□□ -0.92
DNMT1-228ENST00000592705 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
DNMT1-228ENST00000592705 KPRPQ5T749 579 aaPredicted RBP9.33□□□□□ -0.92
DNMT1-228ENST00000592705 TRBV6-8A0A0A6YYG3 113 aa9.33□□□□□ -0.92
DNMT1-228ENST00000592705 A0A096LNJ9 63 aa9.32□□□□□ -0.92
DNMT1-228ENST00000592705 A0A1W2PPR1 153 aa9.32□□□□□ -0.92
DNMT1-228ENST00000592705 REG3AQ06141 175 aa9.32□□□□□ -0.92
DNMT1-228ENST00000592705 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
DNMT1-228ENST00000592705 COX7BP24311 80 aa9.32□□□□□ -0.92
DNMT1-228ENST00000592705 CRIP2P52943 208 aaPredicted RBP9.32□□□□□ -0.92
DNMT1-228ENST00000592705 DSCAML1Q8TD84 2053 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms