RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 TMEM70Q9BUB7 260 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 KRTAP1-5Q9BYS1 174 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 MAP1LC3AQ9H492 121 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 Q9HAA7 133 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 SMCO4Q9NRQ5 59 aa4.35□□□□□ -1.71
VPS4B-205ENST00000591383 HECTD4Q9Y4D8 3996 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.34□□□□□ -1.71
VPS4B-205ENST00000591383 LOC389332A0A1B0GUA5 103 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 IGKV2-29A2NJV5 120 aaPredicted RBP4.34□□□□□ -1.71
VPS4B-205ENST00000591383 I3L3M4 83 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 SCO1O75880 301 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 TSHBP01222 138 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 PRSS2P07478 247 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 PKIAP61925 76 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 RPL24P83731 157 aaKnown RBP4.34□□□□□ -1.71
VPS4B-205ENST00000591383 FABP9Q0Z7S8 132 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 COX19Q49B96 90 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 MPV17L2Q567V2 206 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 AMMECR1LQ6DCA0 310 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 CLPSL2Q6UWE3 100 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 NTM-AS1Q6ZSK4 140 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 NIT1Q86X76 327 aa4.34□□□□□ -1.71
VPS4B-205ENST00000591383 TRBV24-1A0A075B6N3 115 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 TRBV27A0A0K0K1C4 114 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 CRPP02741 224 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 ANGP03950 147 aaKnown RBP4.33□□□□□ -1.72
VPS4B-205ENST00000591383 IQCJQ1A5X6 159 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 RNASEKQ6P5S7 137 aaKnown RBP4.33□□□□□ -1.72
VPS4B-205ENST00000591383 C6orf223Q8N319 242 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 C10orf126Q8N4M7 172 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
VPS4B-205ENST00000591383 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 C20orf78Q9BR46 151 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 GNB1LQ9BYB4 327 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 LAMTOR2Q9Y2Q5 125 aa4.33□□□□□ -1.72
VPS4B-205ENST00000591383 IGKV3OR2-268A0A0C4DH90 116 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 PHOX2AO14813 284 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 TCAPO15273 167 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 RBX1P62877 108 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 Q6ZR54 194 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 Q8N976 141 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 CHCHD7Q9BUK0 85 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 KLK12Q9UKR0 248 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 TRAPPC1Q9Y5R8 145 aa4.32□□□□□ -1.72
VPS4B-205ENST00000591383 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 PSCAO43653 123 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 FGF6P10767 208 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 RAB5AP20339 215 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 POLR2KP53803 58 aaKnown RBP4.31□□□□□ -1.72
VPS4B-205ENST00000591383 MAPKAPK5-AS1Q8N8E1 139 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 UBE2WQ96B02 151 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 YPEL4Q96NS1 127 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 FAT2Q9NYQ8 4349 aa4.31□□□□□ -1.72
VPS4B-205ENST00000591383 IGLV4-60A0A075B6I1 120 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 IGKV2D-24A0A075B6R9 120 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 RPL39P62891 51 aaKnown RBP4.3□□□□□ -1.72
VPS4B-205ENST00000591383 RPL32P62910 135 aaKnown RBP4.3□□□□□ -1.72
VPS4B-205ENST00000591383 LAGE3Q14657 143 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 FA2HQ7L5A8 372 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 Q8N8P6 123 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 OR5A1Q8NGJ0 315 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 TMEM101Q96IK0 257 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 ALKBH7Q9BT30 221 aaPredicted RBP4.3□□□□□ -1.72
VPS4B-205ENST00000591383 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
VPS4B-205ENST00000591383 NXT2Q9NPJ8 142 aaKnown RBP4.3□□□□□ -1.72
VPS4B-205ENST00000591383 IGLV10-54A0A075B6I4 117 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 TRAV8-3A0A0A6YYJ7 113 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 IBA57-AS1B1ANH7 110 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 K7EP13 123 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 RTL8CO15255 209 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 ESDP10768 282 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 ZNF25P17030 456 aaPredicted RBP4.29□□□□□ -1.72
VPS4B-205ENST00000591383 S100A1P23297 94 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 IFI27P40305 119 aaPredicted RBP4.29□□□□□ -1.72
VPS4B-205ENST00000591383 SMAGPQ0VAQ4 97 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 RNASE13Q5GAN3 156 aaKnown RBP4.29□□□□□ -1.72
VPS4B-205ENST00000591383 Q6ZUT4 128 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 LINC00269Q8N2A0 174 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 RMI2Q96E14 147 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 PKHD1P08F94 4074 aa4.29□□□□□ -1.72
VPS4B-205ENST00000591383 H7C423 109 aa4.28□□□□□ -1.72
VPS4B-205ENST00000591383 TRGC2P03986 189 aa4.28□□□□□ -1.72
VPS4B-205ENST00000591383 REG3AQ06141 175 aa4.28□□□□□ -1.72
VPS4B-205ENST00000591383 ORMDL2Q53FV1 153 aa4.28□□□□□ -1.72
VPS4B-205ENST00000591383 C18orf32Q8TCD1 76 aa4.28□□□□□ -1.72
VPS4B-205ENST00000591383 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
VPS4B-205ENST00000591383 CYSLTR1Q9Y271 337 aa4.28□□□□□ -1.72
VPS4B-205ENST00000591383 IGLV5-45A0A087WSX0 123 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 IFITM10A6NMD0 228 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 LECT2O14960 151 aa4.27□□□□□ -1.73
VPS4B-205ENST00000591383 Q0VG73 95 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms