RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 Q8N3U1 123 aa11.94□□□□□ -0.5
VAT1-208ENST00000590924 TMEM18Q96B42 140 aa11.94□□□□□ -0.5
VAT1-208ENST00000590924 IGLV5-52A0A0A0MRZ9 124 aa11.93□□□□□ -0.5
VAT1-208ENST00000590924 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
VAT1-208ENST00000590924 LOC389332A0A1B0GUA5 103 aa11.93□□□□□ -0.5
VAT1-208ENST00000590924 COLCA2A8K830 154 aa11.93□□□□□ -0.5
VAT1-208ENST00000590924 MRPL52Q86TS9 123 aaKnown RBP11.93□□□□□ -0.5
VAT1-208ENST00000590924 Q9HAA7 133 aa11.93□□□□□ -0.5
VAT1-208ENST00000590924 KLK12Q9UKR0 248 aa11.93□□□□□ -0.5
VAT1-208ENST00000590924 DMBT1Q9UGM3 2413 aaPredicted RBP11.92□□□□□ -0.5
VAT1-208ENST00000590924 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
VAT1-208ENST00000590924 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
VAT1-208ENST00000590924 ANGP03950 147 aaKnown RBP11.92□□□□□ -0.5
VAT1-208ENST00000590924 Q0VG73 95 aa11.92□□□□□ -0.5
VAT1-208ENST00000590924 AMMECR1LQ6DCA0 310 aa11.92□□□□□ -0.5
VAT1-208ENST00000590924 Q8N976 141 aa11.92□□□□□ -0.5
VAT1-208ENST00000590924 C20orf203Q8NBC4 194 aa11.92□□□□□ -0.5
VAT1-208ENST00000590924 VPS13BQ7Z7G8 4022 aa11.91□□□□□ -0.5
VAT1-208ENST00000590924 FLG2Q5D862 2391 aaPredicted RBP11.91□□□□□ -0.5
VAT1-208ENST00000590924 ATP6V1G1O75348 118 aa11.91□□□□□ -0.5
VAT1-208ENST00000590924 FGF6P10767 208 aa11.91□□□□□ -0.5
VAT1-208ENST00000590924 Q8N814 137 aa11.91□□□□□ -0.5
VAT1-208ENST00000590924 TIMM21Q9BVV7 248 aa11.91□□□□□ -0.5
VAT1-208ENST00000590924 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
VAT1-208ENST00000590924 CSDC2Q9Y534 153 aaKnown RBP11.91□□□□□ -0.5
VAT1-208ENST00000590924 G0S2P27469 103 aa11.9□□□□□ -0.5
VAT1-208ENST00000590924 IFI27P40305 119 aaPredicted RBP11.9□□□□□ -0.5
VAT1-208ENST00000590924 ORMDL2Q53FV1 153 aa11.9□□□□□ -0.5
VAT1-208ENST00000590924 PRSS3P2Q8NHM4 247 aa11.9□□□□□ -0.5
VAT1-208ENST00000590924 TMEM101Q96IK0 257 aa11.9□□□□□ -0.5
VAT1-208ENST00000590924 IGLV4-60A0A075B6I1 120 aa11.89□□□□□ -0.51
VAT1-208ENST00000590924 LINC01546A6NGU7 62 aa11.89□□□□□ -0.51
VAT1-208ENST00000590924 RMI2Q96E14 147 aa11.89□□□□□ -0.51
VAT1-208ENST00000590924 TM2D2Q9BX73 214 aa11.89□□□□□ -0.51
VAT1-208ENST00000590924 COX11Q9Y6N1 276 aa11.89□□□□□ -0.51
VAT1-208ENST00000590924 SCO1O75880 301 aa11.88□□□□□ -0.51
VAT1-208ENST00000590924 SMR3BP02814 79 aaPredicted RBP11.88□□□□□ -0.51
VAT1-208ENST00000590924 RNASEKQ6P5S7 137 aaKnown RBP11.88□□□□□ -0.51
VAT1-208ENST00000590924 ENHOQ6UWT2 76 aa11.88□□□□□ -0.51
VAT1-208ENST00000590924 UBE2WQ96B02 151 aa11.88□□□□□ -0.51
VAT1-208ENST00000590924 CRPP02741 224 aa11.87□□□□□ -0.51
VAT1-208ENST00000590924 HAMPP81172 84 aa11.87□□□□□ -0.51
VAT1-208ENST00000590924 MIAQ16674 131 aa11.87□□□□□ -0.51
VAT1-208ENST00000590924 LINC00269Q8N2A0 174 aa11.87□□□□□ -0.51
VAT1-208ENST00000590924 OR5A1Q8NGJ0 315 aa11.87□□□□□ -0.51
VAT1-208ENST00000590924 UBE2D4Q9Y2X8 147 aa11.87□□□□□ -0.51
VAT1-208ENST00000590924 FAM229AH3BQW9 127 aa11.86□□□□□ -0.51
VAT1-208ENST00000590924 REG3AQ06141 175 aa11.86□□□□□ -0.51
VAT1-208ENST00000590924 DGAT2L7PQ6IED9 249 aa11.86□□□□□ -0.51
VAT1-208ENST00000590924 C18orf32Q8TCD1 76 aa11.86□□□□□ -0.51
VAT1-208ENST00000590924 CDC42SE2Q9NRR3 84 aa11.86□□□□□ -0.51
VAT1-208ENST00000590924 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
VAT1-208ENST00000590924 HERC1Q15751 4861 aa11.85□□□□□ -0.51
VAT1-208ENST00000590924 TRAV8-4A0A0B4J246 113 aa11.85□□□□□ -0.51
VAT1-208ENST00000590924 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
VAT1-208ENST00000590924 TRGC2P03986 189 aa11.85□□□□□ -0.51
VAT1-208ENST00000590924 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
VAT1-208ENST00000590924 DNAH8Q96JB1 4490 aa11.85□□□□□ -0.51
VAT1-208ENST00000590924 RAB5BP61020 215 aa11.84□□□□□ -0.51
VAT1-208ENST00000590924 FA2HQ7L5A8 372 aa11.84□□□□□ -0.51
VAT1-208ENST00000590924 ZNF664Q8N3J9 261 aa11.84□□□□□ -0.51
VAT1-208ENST00000590924 CYSLTR1Q9Y271 337 aa11.84□□□□□ -0.51
VAT1-208ENST00000590924 SRRM2Q9UQ35 2752 aaKnown RBP11.83□□□□□ -0.52
VAT1-208ENST00000590924 NPSP0C0P6 89 aa11.83□□□□□ -0.52
VAT1-208ENST00000590924 LINC00614P0C842 121 aa11.83□□□□□ -0.52
VAT1-208ENST00000590924 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
VAT1-208ENST00000590924 MRPS36P82909 103 aaKnown RBP11.83□□□□□ -0.52
VAT1-208ENST00000590924 WFDC2Q14508 124 aa11.83□□□□□ -0.52
VAT1-208ENST00000590924 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
VAT1-208ENST00000590924 C2orf66Q6UXQ4 117 aa11.82□□□□□ -0.52
VAT1-208ENST00000590924 C1orf43Q9BWL3 253 aa11.82□□□□□ -0.52
VAT1-208ENST00000590924 MYCBP2O75592 4640 aa11.82□□□□□ -0.52
VAT1-208ENST00000590924 CCL25O15444 150 aa11.81□□□□□ -0.52
VAT1-208ENST00000590924 Q6ZSA8 131 aa11.81□□□□□ -0.52
VAT1-208ENST00000590924 AP5S1Q9NUS5 200 aa11.81□□□□□ -0.52
VAT1-208ENST00000590924 IGKV2D-24A0A075B6R9 120 aa11.8□□□□□ -0.52
VAT1-208ENST00000590924 TOMM6Q96B49 74 aa11.8□□□□□ -0.52
VAT1-208ENST00000590924 CLPSL2Q6UWE3 100 aa11.79□□□□□ -0.52
VAT1-208ENST00000590924 LECT2O14960 151 aa11.78□□□□□ -0.52
VAT1-208ENST00000590924 CHCHD1Q96BP2 118 aaKnown RBP11.78□□□□□ -0.52
VAT1-208ENST00000590924 URB1-AS1Q96HZ7 61 aa11.78□□□□□ -0.52
VAT1-208ENST00000590924 LINC00959A0A1B0GUT2 108 aa11.77□□□□□ -0.53
VAT1-208ENST00000590924 IGIPA6NJ69 53 aa11.77□□□□□ -0.53
VAT1-208ENST00000590924 KRTAP26-1Q6PEX3 210 aa11.77□□□□□ -0.53
VAT1-208ENST00000590924 ERASQ7Z444 233 aa11.77□□□□□ -0.53
VAT1-208ENST00000590924 FAM104AQ969W3 186 aa11.77□□□□□ -0.53
VAT1-208ENST00000590924 TIMM17AQ99595 171 aa11.77□□□□□ -0.53
VAT1-208ENST00000590924 SS18Q15532 418 aa11.76□□□□□ -0.53
VAT1-208ENST00000590924 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
VAT1-208ENST00000590924 Q6ZUT4 128 aa11.76□□□□□ -0.53
VAT1-208ENST00000590924 TMEM141Q96I45 108 aa11.76□□□□□ -0.53
VAT1-208ENST00000590924 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.75□□□□□ -0.53
VAT1-208ENST00000590924 IGLV4-3A0A075B6K6 122 aa11.75□□□□□ -0.53
VAT1-208ENST00000590924 C1orf196B1AJZ1 125 aa11.75□□□□□ -0.53
VAT1-208ENST00000590924 BAGE3Q86Y29 109 aa11.75□□□□□ -0.53
VAT1-208ENST00000590924 BAALCQ8WXS3 180 aa11.75□□□□□ -0.53
VAT1-208ENST00000590924 IGLV10-54A0A075B6I4 117 aa11.74□□□□□ -0.53
VAT1-208ENST00000590924 IGKV3OR2-268A0A0C4DH90 116 aa11.74□□□□□ -0.53
VAT1-208ENST00000590924 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
VAT1-208ENST00000590924 SCGB3A1Q96QR1 104 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms