RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-229	ENST00000590704	TM2D2	Q9BX73	214 aa		13.89	□□□□□ -0.19
CIRBP-229	ENST00000590704	TIMM21	Q9BVV7	248 aa		13.88	□□□□□ -0.19
CIRBP-229	ENST00000590704	TRAPPC1	Q9Y5R8	145 aa		13.88	□□□□□ -0.19
CIRBP-229	ENST00000590704	LINC01546	A6NGU7	62 aa		13.87	□□□□□ -0.19
CIRBP-229	ENST00000590704	AMMECR1L	Q6DCA0	310 aa		13.87	□□□□□ -0.19
CIRBP-229	ENST00000590704	BAALC	Q8WXS3	180 aa		13.87	□□□□□ -0.19
CIRBP-229	ENST00000590704	URB1-AS1	Q96HZ7	61 aa		13.87	□□□□□ -0.19
CIRBP-229	ENST00000590704	SPATA12	Q7Z6I5	190 aa		13.87	□□□□□ -0.19
CIRBP-229	ENST00000590704	IGLV10-54	A0A075B6I4	117 aa		13.86	□□□□□ -0.19
CIRBP-229	ENST00000590704	COLCA2	A8K830	154 aa		13.86	□□□□□ -0.19
CIRBP-229	ENST00000590704	PSCA	O43653	123 aa		13.86	□□□□□ -0.19
CIRBP-229	ENST00000590704	CRP	P02741	224 aa		13.86	□□□□□ -0.19
CIRBP-229	ENST00000590704	OR5A1	Q8NGJ0	315 aa		13.86	□□□□□ -0.19
CIRBP-229	ENST00000590704	OPRPN	Q99935	248 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-229	ENST00000590704	LECT2	O14960	151 aa		13.85	□□□□□ -0.19
CIRBP-229	ENST00000590704	SCO1	O75880	301 aa		13.85	□□□□□ -0.19
CIRBP-229	ENST00000590704	ZNF664	Q8N3J9	261 aa		13.85	□□□□□ -0.19
CIRBP-229	ENST00000590704	C1orf43	Q9BWL3	253 aa		13.85	□□□□□ -0.19
CIRBP-229	ENST00000590704	NXT2	Q9NPJ8	142 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-229	ENST00000590704	COX11	Q9Y6N1	276 aa		13.85	□□□□□ -0.19
CIRBP-229	ENST00000590704		Q6ZUT4	128 aa		13.84	□□□□□ -0.19
CIRBP-229	ENST00000590704	RMI2	Q96E14	147 aa		13.84	□□□□□ -0.19
CIRBP-229	ENST00000590704	TRAV8-4	A0A0B4J246	113 aa		13.83	□□□□□ -0.2
CIRBP-229	ENST00000590704	RAB5A	P20339	215 aa		13.83	□□□□□ -0.2
CIRBP-229	ENST00000590704	RNASE13	Q5GAN3	156 aa	Known RBP	13.83	□□□□□ -0.2
CIRBP-229	ENST00000590704	LINC00959	A0A1B0GUT2	108 aa		13.82	□□□□□ -0.2
CIRBP-229	ENST00000590704		Q8N814	137 aa		13.82	□□□□□ -0.2
CIRBP-229	ENST00000590704	C18orf32	Q8TCD1	76 aa		13.82	□□□□□ -0.2
CIRBP-229	ENST00000590704	APOB	P04114	4563 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-229	ENST00000590704	DNAH8	Q96JB1	4490 aa		13.81	□□□□□ -0.2
CIRBP-229	ENST00000590704	IGKV3OR2-268	A0A0C4DH90	116 aa		13.81	□□□□□ -0.2
CIRBP-229	ENST00000590704		K7EMI3	77 aa		13.81	□□□□□ -0.2
CIRBP-229	ENST00000590704	TMEM101	Q96IK0	257 aa		13.81	□□□□□ -0.2
CIRBP-229	ENST00000590704	MRPS36	P82909	103 aa	Known RBP	13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	PYGO1	Q9Y3Y4	419 aa		13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	IGIP	A6NJ69	53 aa		13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	C2orf66	Q6UXQ4	117 aa		13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	NTN5	Q8WTR8	489 aa	Predicted RBP	13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	TMEM18	Q96B42	140 aa		13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	SPANXA1	Q9NS26	97 aa		13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	KIAA1109	Q2LD37	5005 aa		13.8	□□□□□ -0.2
CIRBP-229	ENST00000590704	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.79	□□□□□ -0.2
CIRBP-229	ENST00000590704	IGLV4-3	A0A075B6K6	122 aa		13.78	□□□□□ -0.2
CIRBP-229	ENST00000590704		A0A096LNJ9	63 aa		13.78	□□□□□ -0.2
CIRBP-229	ENST00000590704	FOXI1	Q12951	378 aa		13.78	□□□□□ -0.2
CIRBP-229	ENST00000590704	ORMDL2	Q53FV1	153 aa		13.78	□□□□□ -0.2
CIRBP-229	ENST00000590704	PRSS3P2	Q8NHM4	247 aa		13.78	□□□□□ -0.2
CIRBP-229	ENST00000590704	PGPEP1	Q9NXJ5	209 aa		13.78	□□□□□ -0.2
CIRBP-229	ENST00000590704	DGAT2L7P	Q6IED9	249 aa		13.77	□□□□□ -0.21
CIRBP-229	ENST00000590704	GAGE12H	A6NDE8	117 aa		13.76	□□□□□ -0.21
CIRBP-229	ENST00000590704	USP17L23	D6RBM5	183 aa		13.76	□□□□□ -0.21
CIRBP-229	ENST00000590704	TRGC2	P03986	189 aa		13.76	□□□□□ -0.21
CIRBP-229	ENST00000590704	LINC00173	Q6ZV60	143 aa		13.76	□□□□□ -0.21
CIRBP-229	ENST00000590704	TOMM6	Q96B49	74 aa		13.76	□□□□□ -0.21
CIRBP-229	ENST00000590704	HSPG2	P98160	4391 aa		13.75	□□□□□ -0.21
CIRBP-229	ENST00000590704	CCL25	O15444	150 aa		13.75	□□□□□ -0.21
CIRBP-229	ENST00000590704	ZC2HC1B	Q5TFG8	222 aa		13.75	□□□□□ -0.21
CIRBP-229	ENST00000590704	CYSLTR1	Q9Y271	337 aa		13.75	□□□□□ -0.21
CIRBP-229	ENST00000590704	PRSS1	P07477	247 aa		13.74	□□□□□ -0.21
CIRBP-229	ENST00000590704	EREG	O14944	169 aa		13.74	□□□□□ -0.21
CIRBP-229	ENST00000590704	C15orf56	Q8N910	161 aa		13.74	□□□□□ -0.21
CIRBP-229	ENST00000590704	C16orf90	A8MZG2	172 aa		13.73	□□□□□ -0.21
CIRBP-229	ENST00000590704	SLPI	P03973	132 aa		13.73	□□□□□ -0.21
CIRBP-229	ENST00000590704	SMAGP	Q0VAQ4	97 aa		13.73	□□□□□ -0.21
CIRBP-229	ENST00000590704	AMELX	Q99217	191 aa		13.73	□□□□□ -0.21
CIRBP-229	ENST00000590704	LINC00614	P0C842	121 aa		13.72	□□□□□ -0.21
CIRBP-229	ENST00000590704	XCL1	P47992	114 aa		13.72	□□□□□ -0.21
CIRBP-229	ENST00000590704	KRTAP10-1	P60331	282 aa		13.72	□□□□□ -0.21
CIRBP-229	ENST00000590704	TRAV13-1	A0A0B4J241	112 aa		13.71	□□□□□ -0.21
CIRBP-229	ENST00000590704	CDPF1	Q6NVV7	123 aa		13.71	□□□□□ -0.21
CIRBP-229	ENST00000590704	CD164L2	Q6UWJ8	174 aa		13.71	□□□□□ -0.21
CIRBP-229	ENST00000590704	RYR1	P21817	5038 aa		13.71	□□□□□ -0.22
CIRBP-229	ENST00000590704	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.7	□□□□□ -0.22
CIRBP-229	ENST00000590704	SS18	Q15532	418 aa		13.7	□□□□□ -0.22
CIRBP-229	ENST00000590704	C1orf196	B1AJZ1	125 aa		13.69	□□□□□ -0.22
CIRBP-229	ENST00000590704	NPS	P0C0P6	89 aa		13.69	□□□□□ -0.22
CIRBP-229	ENST00000590704	LINC00310	P59036	64 aa		13.69	□□□□□ -0.22
CIRBP-229	ENST00000590704	FA2H	Q7L5A8	372 aa		13.69	□□□□□ -0.22
CIRBP-229	ENST00000590704	TMEM141	Q96I45	108 aa		13.69	□□□□□ -0.22
CIRBP-229	ENST00000590704	TIMM17A	Q99595	171 aa		13.69	□□□□□ -0.22
CIRBP-229	ENST00000590704	KRTAP17-1	Q9BYP8	105 aa		13.69	□□□□□ -0.22
CIRBP-229	ENST00000590704	ATP6V1G1	O75348	118 aa		13.68	□□□□□ -0.22
CIRBP-229	ENST00000590704	ERAS	Q7Z444	233 aa		13.68	□□□□□ -0.22
CIRBP-229	ENST00000590704	AP5S1	Q9NUS5	200 aa		13.68	□□□□□ -0.22
CIRBP-229	ENST00000590704	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.67	□□□□□ -0.22
CIRBP-229	ENST00000590704	UBE2D1	P51668	147 aa		13.67	□□□□□ -0.22
CIRBP-229	ENST00000590704	COX6A2	Q02221	97 aa		13.67	□□□□□ -0.22
CIRBP-229	ENST00000590704	IGLV5-52	A0A0A0MRZ9	124 aa		13.67	□□□□□ -0.22
CIRBP-229	ENST00000590704	PMCHL1	Q16048	86 aa		13.67	□□□□□ -0.22
CIRBP-229	ENST00000590704	LINC01620	Q4KN68	170 aa		13.67	□□□□□ -0.22
CIRBP-229	ENST00000590704	LINC00242	Q5T6M2	205 aa		13.67	□□□□□ -0.22
CIRBP-229	ENST00000590704	IFITM10	A6NMD0	228 aa		13.65	□□□□□ -0.22
CIRBP-229	ENST00000590704	G0S2	P27469	103 aa		13.65	□□□□□ -0.22
CIRBP-229	ENST00000590704	PDZD11	Q5EBL8	140 aa		13.65	□□□□□ -0.22
CIRBP-229	ENST00000590704	FAM19A3	Q7Z5A8	133 aa		13.65	□□□□□ -0.22
CIRBP-229	ENST00000590704	HERC2	O95714	4834 aa		13.64	□□□□□ -0.23
CIRBP-229	ENST00000590704	GCSH	P23434	173 aa		13.64	□□□□□ -0.23
CIRBP-229	ENST00000590704	SCGB3A1	Q96QR1	104 aa		13.64	□□□□□ -0.23
CIRBP-229	ENST00000590704	FAM30A	Q9NZY2	134 aa		13.64	□□□□□ -0.23
CIRBP-229	ENST00000590704	NUPR1	O60356	82 aa		13.63	□□□□□ -0.23

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