RNA–Protein interactions for RNA: ENST00000590563.1

LSM12-203, Transcript of LSM12 homolog, humanhuman

TSL 2

Gene LSM12, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-203ENST00000590563 SPAG11BQ08648 103 aa7.52□□□□□ -1.21
LSM12-203ENST00000590563 LINC00242Q5T6M2 205 aa7.52□□□□□ -1.21
LSM12-203ENST00000590563 C10orf25Q5T742 122 aa7.52□□□□□ -1.21
LSM12-203ENST00000590563 NKX6-2Q9C056 277 aaPredicted RBP7.52□□□□□ -1.21
LSM12-203ENST00000590563 SMDT1Q9H4I9 107 aa7.51□□□□□ -1.21
LSM12-203ENST00000590563 CDC42SE2Q9NRR3 84 aa7.51□□□□□ -1.21
LSM12-203ENST00000590563 MBP02144 154 aa7.5□□□□□ -1.21
LSM12-203ENST00000590563 AKR1C3P42330 323 aa7.5□□□□□ -1.21
LSM12-203ENST00000590563 GAGE2EQ4V326 116 aa7.5□□□□□ -1.21
LSM12-203ENST00000590563 LINC00337Q8N6G1 96 aa7.5□□□□□ -1.21
LSM12-203ENST00000590563 GATD1Q8NB37 220 aa7.5□□□□□ -1.21
LSM12-203ENST00000590563 IMMP2LQ96T52 175 aa7.5□□□□□ -1.21
LSM12-203ENST00000590563 GAGE2DQ9UEU5 116 aa7.5□□□□□ -1.21
LSM12-203ENST00000590563 FCGBPQ9Y6R7 5405 aaPredicted RBP7.5□□□□□ -1.21
LSM12-203ENST00000590563 CTAG1AP78358 180 aa7.49□□□□□ -1.21
LSM12-203ENST00000590563 RPL39LQ96EH5 51 aaKnown RBP7.49□□□□□ -1.21
LSM12-203ENST00000590563 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
LSM12-203ENST00000590563 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
LSM12-203ENST00000590563 TPPP3Q9BW30 176 aa7.49□□□□□ -1.21
LSM12-203ENST00000590563 CTDSP1Q9GZU7 261 aa7.49□□□□□ -1.21
LSM12-203ENST00000590563 TNFSF18Q9UNG2 199 aa7.49□□□□□ -1.21
LSM12-203ENST00000590563 NUPR1O60356 82 aa7.48□□□□□ -1.21
LSM12-203ENST00000590563 SERF2P84101 59 aa7.48□□□□□ -1.21
LSM12-203ENST00000590563 C5orf38Q86SI9 138 aa7.48□□□□□ -1.21
LSM12-203ENST00000590563 OR2D3Q8NGH3 330 aa7.48□□□□□ -1.21
LSM12-203ENST00000590563 C6orf48Q9UBA6 75 aa7.48□□□□□ -1.21
LSM12-203ENST00000590563 CTXND1A0A1B0GTU2 59 aa7.47□□□□□ -1.21
LSM12-203ENST00000590563 INMT-MINDY4F8WBC2 141 aa7.47□□□□□ -1.21
LSM12-203ENST00000590563 C9orf129Q5T035 196 aaKnown RBP7.47□□□□□ -1.21
LSM12-203ENST00000590563 FP248Q71RG6 208 aaPredicted RBP7.47□□□□□ -1.21
LSM12-203ENST00000590563 MRPL52Q86TS9 123 aaKnown RBP7.47□□□□□ -1.21
LSM12-203ENST00000590563 TCEAL7Q9BRU2 100 aa7.47□□□□□ -1.21
LSM12-203ENST00000590563 PET100P0DJ07 73 aa7.46□□□□□ -1.22
LSM12-203ENST00000590563 DEFA1P59665 94 aa7.46□□□□□ -1.22
LSM12-203ENST00000590563 IFITM3Q01628 133 aa7.46□□□□□ -1.22
LSM12-203ENST00000590563 MZT2BQ6NZ67 158 aa7.46□□□□□ -1.22
LSM12-203ENST00000590563 C1orf196B1AJZ1 125 aa7.45□□□□□ -1.22
LSM12-203ENST00000590563 TRGC1P0CF51 173 aa7.45□□□□□ -1.22
LSM12-203ENST00000590563 FHITP49789 147 aa7.45□□□□□ -1.22
LSM12-203ENST00000590563 FAM229BQ4G0N7 80 aa7.45□□□□□ -1.22
LSM12-203ENST00000590563 UNQ6190/PRO20217Q6UXQ8 127 aa7.45□□□□□ -1.22
LSM12-203ENST00000590563 OR10D4PQ8NGN7 298 aa7.45□□□□□ -1.22
LSM12-203ENST00000590563 FLGP20930 4061 aaPredicted RBP7.44□□□□□ -1.22
LSM12-203ENST00000590563 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
LSM12-203ENST00000590563 NDUFA1O15239 70 aa7.44□□□□□ -1.22
LSM12-203ENST00000590563 CTRLP40313 264 aa7.44□□□□□ -1.22
LSM12-203ENST00000590563 RPL28P46779 137 aaKnown RBP7.44□□□□□ -1.22
LSM12-203ENST00000590563 BAGE2Q86Y30 109 aa7.44□□□□□ -1.22
LSM12-203ENST00000590563 STOML3Q8TAV4 291 aa7.44□□□□□ -1.22
LSM12-203ENST00000590563 F8WDY8 70 aa7.43□□□□□ -1.22
LSM12-203ENST00000590563 S100ZQ8WXG8 99 aa7.43□□□□□ -1.22
LSM12-203ENST00000590563 CCDC32Q9BV29 185 aa7.43□□□□□ -1.22
LSM12-203ENST00000590563 SYNE2Q8WXH0 6885 aaKnown RBP7.42□□□□□ -1.22
LSM12-203ENST00000590563 SCO2A0A1W2PP80 73 aa7.42□□□□□ -1.22
LSM12-203ENST00000590563 BCE1O60756 84 aa7.42□□□□□ -1.22
LSM12-203ENST00000590563 RNASE13Q5GAN3 156 aaKnown RBP7.42□□□□□ -1.22
LSM12-203ENST00000590563 CST9LP1Q5W188 147 aa7.42□□□□□ -1.22
LSM12-203ENST00000590563 ORAOV1Q8WV07 137 aa7.42□□□□□ -1.22
LSM12-203ENST00000590563 ALG5Q9Y673 324 aa7.42□□□□□ -1.22
LSM12-203ENST00000590563 FAM240BA0A1B0GVZ2 78 aa7.41□□□□□ -1.22
LSM12-203ENST00000590563 I3L3M4 83 aa7.41□□□□□ -1.22
LSM12-203ENST00000590563 S100A9P06702 114 aaKnown RBP7.41□□□□□ -1.22
LSM12-203ENST00000590563 TMEM241Q24JQ0 296 aa7.41□□□□□ -1.22
LSM12-203ENST00000590563 LYZL1Q6UWQ5 148 aa7.41□□□□□ -1.22
LSM12-203ENST00000590563 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
LSM12-203ENST00000590563 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
LSM12-203ENST00000590563 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
LSM12-203ENST00000590563 TRAV13-1A0A0B4J241 112 aa7.4□□□□□ -1.22
LSM12-203ENST00000590563 UPK1BO75841 260 aa7.4□□□□□ -1.22
LSM12-203ENST00000590563 RNASE7Q9H1E1 156 aaKnown RBP7.4□□□□□ -1.22
LSM12-203ENST00000590563 C22orf24Q9Y442 160 aa7.4□□□□□ -1.22
LSM12-203ENST00000590563 MAP1LC3B2A6NCE7 125 aa7.39□□□□□ -1.23
LSM12-203ENST00000590563 F2Z2F3 143 aa7.39□□□□□ -1.23
LSM12-203ENST00000590563 XP32Q5T750 250 aa7.39□□□□□ -1.23
LSM12-203ENST00000590563 MAP1LC3BQ9GZQ8 125 aa7.39□□□□□ -1.23
LSM12-203ENST00000590563 IGKV2D-26A0A0A0MRZ7 120 aa7.38□□□□□ -1.23
LSM12-203ENST00000590563 PAGE4O60829 102 aa7.38□□□□□ -1.23
LSM12-203ENST00000590563 PMCHP20382 165 aa7.38□□□□□ -1.23
LSM12-203ENST00000590563 RPS20P60866 119 aaKnown RBP7.38□□□□□ -1.23
LSM12-203ENST00000590563 TRBV6-5A0A0K0K1A5 114 aa7.37□□□□□ -1.23
LSM12-203ENST00000590563 NDUFC2-KCTD14E9PQ53 114 aa7.37□□□□□ -1.23
LSM12-203ENST00000590563 TNFRSF6BO95407 300 aa7.37□□□□□ -1.23
LSM12-203ENST00000590563 FOXA3P55318 350 aaPredicted RBP7.37□□□□□ -1.23
LSM12-203ENST00000590563 C3orf22Q8N5N4 141 aa7.37□□□□□ -1.23
LSM12-203ENST00000590563 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
LSM12-203ENST00000590563 MACF1Q9UPN3 7388 aaKnown RBP7.37□□□□□ -1.23
LSM12-203ENST00000590563 C7orf77A4D0Y5 90 aa7.36□□□□□ -1.23
LSM12-203ENST00000590563 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
LSM12-203ENST00000590563 Q6ZUT4 128 aa7.36□□□□□ -1.23
LSM12-203ENST00000590563 UBE2D4Q9Y2X8 147 aa7.36□□□□□ -1.23
LSM12-203ENST00000590563 IGHV3OR16-9A0A0B4J2B5 98 aa7.35□□□□□ -1.23
LSM12-203ENST00000590563 M0R2T5 61 aa7.35□□□□□ -1.23
LSM12-203ENST00000590563 TWIST1Q15672 202 aa7.35□□□□□ -1.23
LSM12-203ENST00000590563 RPL7L1Q6DKI1 246 aaKnown RBP7.35□□□□□ -1.23
LSM12-203ENST00000590563 CSDC2Q9Y534 153 aaKnown RBP7.35□□□□□ -1.23
LSM12-203ENST00000590563 C9orf62Q8N4C0 152 aa7.34□□□□□ -1.23
LSM12-203ENST00000590563 CYTL1Q9NRR1 136 aa7.34□□□□□ -1.23
LSM12-203ENST00000590563 TRBV30A0A0K0K1B3 111 aa7.33□□□□□ -1.24
LSM12-203ENST00000590563 RPL35P42766 123 aaKnown RBP7.33□□□□□ -1.24
LSM12-203ENST00000590563 LBHQ53QV2 105 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms