RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 ATP6V1FQ16864 119 aa2.34□□□□□ -2.03
SAFB-208ENST00000590485 GCSAMLQ5JQS6 135 aa2.34□□□□□ -2.03
SAFB-208ENST00000590485 SPINK6Q6UWN8 80 aa2.34□□□□□ -2.03
SAFB-208ENST00000590485 MIR17HGQ75NE6 70 aa2.34□□□□□ -2.03
SAFB-208ENST00000590485 HYLS1Q96M11 299 aa2.34□□□□□ -2.03
SAFB-208ENST00000590485 NMES1Q9C002 83 aa2.34□□□□□ -2.03
SAFB-208ENST00000590485 TREM1Q9NP99 234 aa2.34□□□□□ -2.03
SAFB-208ENST00000590485 IGHV3-64A0A075B6Q5 118 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 OR7C2O60412 319 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 ANGP03950 147 aaKnown RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 RNASE3P12724 160 aaKnown RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 PVALBP20472 110 aaPredicted RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 SULT1A1P50225 295 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 CNBPP62633 177 aaKnown RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 SPCS2Q15005 226 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 LGALSLQ3ZCW2 172 aaPredicted RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 PYDC2Q56P42 97 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 FAM74A1Q5RGS3 127 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 STX12Q86Y82 276 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 BCL7BQ9BQE9 202 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 TMEM243Q9BU79 118 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 NPCDR1Q9BY65 106 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 C11orf1Q9H5F2 150 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 OTORQ9NRC9 128 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 LYRM2Q9NU23 88 aaPredicted RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 PLAC8Q9NZF1 115 aa2.33□□□□□ -2.04
SAFB-208ENST00000590485 LSM5Q9Y4Y9 91 aaKnown RBP2.33□□□□□ -2.04
SAFB-208ENST00000590485 TRBV6-8A0A0A6YYG3 113 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 TRBV10-1A0A0K0K1A3 114 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 IGSF23A1L1A6 192 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 TEX46H3BTG2 121 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 NDUFB6O95139 128 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 GCGP01275 180 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 TCRBP04435 133 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 S100A4P26447 101 aaKnown RBP2.32□□□□□ -2.04
SAFB-208ENST00000590485 ZNF80P51504 273 aaPredicted RBP2.32□□□□□ -2.04
SAFB-208ENST00000590485 PKIAP61925 76 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 UBE2L3P68036 154 aaKnown RBP2.32□□□□□ -2.04
SAFB-208ENST00000590485 KRTAP26-1Q6PEX3 210 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 GOLT1AQ6ZVE7 132 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 ST20-AS1Q8NBB2 130 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 MITD1Q8WV92 249 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 MRPS26Q9BYN8 205 aaKnown RBP2.32□□□□□ -2.04
SAFB-208ENST00000590485 KCNIP2Q9NS61 270 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 OR5AC2Q9NZP5 309 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 VAX2Q9UIW0 290 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 FLVCR2Q9UPI3 526 aa2.32□□□□□ -2.04
SAFB-208ENST00000590485 LPAP08519 4548 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 TRBV7-3A0A075B6L6 115 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 SERTM2A0A1B0GWG4 89 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 NAP1L6A6NFF2 107 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 CCDC160A6NGH7 325 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 FAM25EA8MYX2 175 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 C17orf112F2Z3M2 114 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 RAB5AP20339 215 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 TAS2R45P59539 299 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 S100A10P60903 97 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 UBE2D3P61077 147 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 UBE2D2P62837 147 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 IFITM3Q01628 133 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 KHDC3LQ587J8 217 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 FAM74A4Q5TZK3 123 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 LINC00269Q8N2A0 174 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 TMEM75Q8N9X5 138 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 IL36BQ9NZH7 164 aa2.31□□□□□ -2.04
SAFB-208ENST00000590485 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 TRAV8-4A0A0B4J246 113 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 NDUFS6O75380 124 aaKnown RBP2.3□□□□□ -2.04
SAFB-208ENST00000590485 PTTG1O95997 202 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 IFNA7P01567 189 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 P01737 135 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 GZMBP10144 247 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 RBX1P62877 108 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 GNG5P63218 68 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 FLI1Q01543 452 aaPredicted RBP2.3□□□□□ -2.04
SAFB-208ENST00000590485 COX6A2Q02221 97 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 TMEM97Q5BJF2 176 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 SAPCD1Q5SSQ6 148 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 CLPSL2Q6UWE3 100 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 ZNF664Q8N3J9 261 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 MIR7-3HGQ8N6C7 128 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.3□□□□□ -2.04
SAFB-208ENST00000590485 SPANXA2-OT1Q8N9U9 137 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 OR5C1Q8NGR4 320 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 SFRP2Q96HF1 295 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 WDR61Q9GZS3 305 aaKnown RBP2.3□□□□□ -2.04
SAFB-208ENST00000590485 V9GYH0 126 aa2.3□□□□□ -2.04
SAFB-208ENST00000590485 TRAV26-2A0A0B4J265 109 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 IGKV2-24A0A0C4DH68 120 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 MUC21A0A0G2JKD1 596 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 A0A1W2PPV4 95 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 CENPXA8MT69 81 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 FABP5P3A8MUU1 101 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 B4DEV8 164 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 H3BVH4 76 aa2.29□□□□□ -2.04
SAFB-208ENST00000590485 TCRAP04437 139 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms