RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ERASQ7Z444 233 aa5.4□□□□□ -1.54
SMAD4-209ENST00000589941 PCP2Q8IVA1 136 aa5.4□□□□□ -1.54
SMAD4-209ENST00000589941 ZNF502Q8TBZ5 544 aa5.4□□□□□ -1.54
SMAD4-209ENST00000589941 VGLL1Q99990 258 aa5.4□□□□□ -1.54
SMAD4-209ENST00000589941 VPS25Q9BRG1 176 aa5.4□□□□□ -1.54
SMAD4-209ENST00000589941 LENEPQ9Y5L5 61 aa5.4□□□□□ -1.54
SMAD4-209ENST00000589941 DNAH8Q96JB1 4490 aa5.4□□□□□ -1.55
SMAD4-209ENST00000589941 IGKV2D-26A0A0A0MRZ7 120 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 TRAV12-1A0A0B4J245 112 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 E9PLD3 99 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 H0Y8G0 127 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 H3BUT2 72 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 K7EMI3 77 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 DPM2O94777 84 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 IGHV3-23P01764 117 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 IGKCP01834 107 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 UNQ9165/PRO28630Q6UXU0 137 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 S4R3C0 116 aa5.39□□□□□ -1.55
SMAD4-209ENST00000589941 IGKV3D-20A0A0C4DH25 116 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 IGHV7-4-1A0A0J9YVY3 117 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 NBDYA0A0U1RRE5 68 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 SMKR1H3BMG3 65 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 CLEC3BP05452 202 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 FABP2P12104 132 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 FXYD2P54710 66 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 KRTAP10-1P60331 282 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 FOXI2Q6ZQN5 318 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 SMIM29Q86T20 159 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 Q8TAT8 98 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 USMG5Q96IX5 58 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 AP1S3Q96PC3 154 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 CHAC1Q9BUX1 264 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 TPPP3Q9BW30 176 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 SPCS1Q9Y6A9 102 aa5.38□□□□□ -1.55
SMAD4-209ENST00000589941 TNXBP22105 4242 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 TRBV7-3A0A075B6L6 115 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 TRBV25-1A0A075B6N4 114 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 A0A087WX48 190 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 TMSB15BA0A087X1C1 80 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 TRAV8-2A0A0B4J237 113 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 GAS8-AS1O95177 125 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 SCGB1A1P11684 91 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 LEPP41159 167 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 CEND1Q8N111 149 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 MRAP2Q96G30 205 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 SPAG8Q99932 426 aaPredicted RBP5.37□□□□□ -1.55
SMAD4-209ENST00000589941 MUC2Q02817 5179 aa5.37□□□□□ -1.55
SMAD4-209ENST00000589941 TRAV25A0A0B4J276 109 aa5.36□□□□□ -1.55
SMAD4-209ENST00000589941 TRBV7-9A0A0J9YWB2 115 aa5.36□□□□□ -1.55
SMAD4-209ENST00000589941 M0R381 172 aa5.36□□□□□ -1.55
SMAD4-209ENST00000589941 ZNF207O43670 478 aaKnown RBP5.36□□□□□ -1.55
SMAD4-209ENST00000589941 GIG44P09565 113 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-209ENST00000589941 PRB4P10163 310 aaPredicted RBP5.36□□□□□ -1.55
SMAD4-209ENST00000589941 PLNP26678 52 aa5.36□□□□□ -1.55
SMAD4-209ENST00000589941 RPL32P62910 135 aaKnown RBP5.36□□□□□ -1.55
SMAD4-209ENST00000589941 AGPAT4-IT1Q9H0P7 198 aa5.36□□□□□ -1.55
SMAD4-209ENST00000589941 FAM223BA6NKX1 122 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 TMEM238C9JI98 176 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 NXPH4O95158 308 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 ORM1P02763 201 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 ARL3P36405 182 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 NMUP48645 174 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 FXYD7P58549 80 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 ATP5G2Q06055 141 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 ERCC8Q13216 396 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 LAGE3Q14657 143 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 C15orf32Q32M92 178 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 FAM223AQ8IWN6 122 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 ZNRF2Q8NHG8 242 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 FAM19A4Q96LR4 140 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 C20orf78Q9BR46 151 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 SMIM2Q9BVW6 85 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 PRO0461Q9UI25 63 aa5.35□□□□□ -1.55
SMAD4-209ENST00000589941 TIMM8BQ9Y5J9 83 aaPredicted RBP5.35□□□□□ -1.55
SMAD4-209ENST00000589941 TRBV7-1A0A0A6YYK4 115 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 IGHV3-35A0A0C4DH35 117 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 LINC01549A6NIU2 74 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 F8VRH5 84 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 F8W1H4 67 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 GATA1P15976 413 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-209ENST00000589941 ASIPP42127 132 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 ZC2HC1BQ5TFG8 222 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 GPHB5Q86YW7 130 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 TOMM6Q96B49 74 aa5.34□□□□□ -1.55
SMAD4-209ENST00000589941 SPANXB1Q9NS25 103 aaPredicted RBP5.34□□□□□ -1.55
SMAD4-209ENST00000589941 MRPL35Q9NZE8 188 aaKnown RBP5.34□□□□□ -1.55
SMAD4-209ENST00000589941 H7C1H1 209 aa5.33□□□□□ -1.56
SMAD4-209ENST00000589941 SOCS3O14543 225 aa5.33□□□□□ -1.56
SMAD4-209ENST00000589941 PRSS1P07477 247 aa5.33□□□□□ -1.56
SMAD4-209ENST00000589941 RRN3P1Q2M238 152 aa5.33□□□□□ -1.56
SMAD4-209ENST00000589941 ORMDL2Q53FV1 153 aa5.33□□□□□ -1.56
SMAD4-209ENST00000589941 CLEC19AQ6UXS0 136 aa5.33□□□□□ -1.56
SMAD4-209ENST00000589941 EEF1AKMT3Q96AZ1 226 aa5.33□□□□□ -1.56
SMAD4-209ENST00000589941 IGHV3OR16-8A0A075B7F1 116 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 TEX48A0A1B0GUV7 120 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 MIFP14174 115 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 TMEM78Q5T7P6 136 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms