RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TNFRSF6BO95407 300 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 KIAA1644Q3SXP7 199 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 UFSP1Q6NVU6 142 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 Q6ZRU5 148 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 FA2HQ7L5A8 372 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 NEXN-AS1Q8NBZ9 246 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 PRSS3P2Q8NHM4 247 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 RNF185Q96GF1 192 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
VPS25-204ENST00000589577 TRBV25-1A0A075B6N4 114 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 TRBV6-5A0A0K0K1A5 114 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 COLCA2A8K830 154 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 SMKR1H3BMG3 65 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 I3L3M4 83 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 K7EMI3 77 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 K7EP13 123 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 TRGC2P03986 189 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 AMTP48728 403 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 BAGE3Q86Y29 109 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 RPL39LQ96EH5 51 aaKnown RBP3.97□□□□□ -1.77
VPS25-204ENST00000589577 SMIM2Q9BVW6 85 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 GTSF1LQ9H1H1 148 aa3.97□□□□□ -1.77
VPS25-204ENST00000589577 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.96□□□□□ -1.78
VPS25-204ENST00000589577 IGHV1-24A0A0C4DH33 117 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 LOC389332A0A1B0GUA5 103 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 NPYP01303 97 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 S100A6P06703 90 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 UBE2D3P61077 147 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 UBE2D2P62837 147 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 RPL32P62910 135 aaKnown RBP3.96□□□□□ -1.78
VPS25-204ENST00000589577 ORMDL2Q53FV1 153 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 LCE2CQ5TA81 110 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 AMMECR1LQ6DCA0 310 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 DGAT2L7PQ6IED9 249 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 YPEL4Q96NS1 127 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 CHCHD5Q9BSY4 110 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 TMEM243Q9BU79 118 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 AP5S1Q9NUS5 200 aa3.96□□□□□ -1.78
VPS25-204ENST00000589577 A0A087WX48 190 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 IGHV3-38A0A0C4DH36 116 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 TRBV27A0A0K0K1C4 114 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 LOC100131303A0A0U1RQF7 123 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 LECT2O14960 151 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 HSBP1O75506 76 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 TIRAPP58753 221 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 LAGE3Q14657 143 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 RNASEKQ6P5S7 137 aaKnown RBP3.95□□□□□ -1.78
VPS25-204ENST00000589577 Q8N8P6 123 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 NRACQ8N912 160 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 TMEM101Q96IK0 257 aa3.95□□□□□ -1.78
VPS25-204ENST00000589577 ALKBH7Q9BT30 221 aaPredicted RBP3.95□□□□□ -1.78
VPS25-204ENST00000589577 TRBV6-8A0A0A6YYG3 113 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 IBA57-AS1B1ANH7 110 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 TMEM262E9PQX1 116 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 H7C423 109 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 POLR2KP53803 58 aaKnown RBP3.94□□□□□ -1.78
VPS25-204ENST00000589577 PAPPA-AS1Q5QFB9 102 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 Q6ZN92 141 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 C10orf126Q8N4M7 172 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 C18orf32Q8TCD1 76 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 CHCHD1Q96BP2 118 aaKnown RBP3.94□□□□□ -1.78
VPS25-204ENST00000589577 CHCHD7Q9BUK0 85 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 Q9HAA7 133 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 CYSLTR1Q9Y271 337 aa3.94□□□□□ -1.78
VPS25-204ENST00000589577 A0A0U1RQV1 116 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 PRSS47A8MTI9 375 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 CRPP02741 224 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 LINC00614P0C842 121 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 LINC00694P0DN24 101 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 ZNF25P17030 456 aaPredicted RBP3.93□□□□□ -1.78
VPS25-204ENST00000589577 S100A2P29034 98 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 IFI27P40305 119 aaPredicted RBP3.93□□□□□ -1.78
VPS25-204ENST00000589577 IQCJQ1A5X6 159 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 OR5A1Q8NGJ0 315 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 LINC01600Q96MT4 127 aa3.93□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BKO60814 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HBDP02042 147 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BJP06899 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BOP23527 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BBP33778 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BDP58876 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BCP62807 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 Q0VG73 95 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST2H2BEQ16778 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
VPS25-204ENST00000589577 C2orf66Q6UXQ4 117 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 C2orf88Q9BSF0 95 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 SPANXA1Q9NS26 97 aa3.92□□□□□ -1.78
VPS25-204ENST00000589577 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.91□□□□□ -1.78
VPS25-204ENST00000589577 IGKV2-29A2NJV5 120 aaPredicted RBP3.91□□□□□ -1.78
VPS25-204ENST00000589577 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.91□□□□□ -1.78
VPS25-204ENST00000589577 SERF1AO75920 110 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 ATP5LO75964 103 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 TSHBP01222 138 aa3.91□□□□□ -1.78
VPS25-204ENST00000589577 ANGP03950 147 aaKnown RBP3.91□□□□□ -1.78
VPS25-204ENST00000589577 NDUFA6P56556 154 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms