RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	TRAV8-4	A0A0B4J246	113 aa		11.19	□□□□□ -0.62
DDX39A-209	ENST00000589318	IGHV3-30	P01768	117 aa		11.19	□□□□□ -0.62
DDX39A-209	ENST00000589318	PRM2	P04554	102 aa		11.19	□□□□□ -0.62
DDX39A-209	ENST00000589318	IGHV3-30-5	P0DP03	117 aa		11.19	□□□□□ -0.62
DDX39A-209	ENST00000589318	PRIMA1	Q86XR5	153 aa		11.19	□□□□□ -0.62
DDX39A-209	ENST00000589318	BAALC	Q8WXS3	180 aa		11.19	□□□□□ -0.62
DDX39A-209	ENST00000589318	TRAV4	A0A0B4J268	109 aa		11.18	□□□□□ -0.62
DDX39A-209	ENST00000589318	ATXN8	Q156A1	80 aa		11.18	□□□□□ -0.62
DDX39A-209	ENST00000589318	C9orf66	Q5T8R8	295 aa		11.18	□□□□□ -0.62
DDX39A-209	ENST00000589318	SPANXC	Q9NY87	97 aa		11.18	□□□□□ -0.62
DDX39A-209	ENST00000589318	XCL2	Q9UBD3	114 aa		11.18	□□□□□ -0.62
DDX39A-209	ENST00000589318	KIF25-AS1	Q9Y6Z4	181 aa		11.18	□□□□□ -0.62
DDX39A-209	ENST00000589318	MAST4	O15021	2626 aa		11.18	□□□□□ -0.62
DDX39A-209	ENST00000589318	TRGV11	A0A075B6L2	103 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	INS	P01308	110 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	GIG44	P09565	113 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	PLEKHB2	Q96CS7	222 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	LINC00467	Q9BRT7	94 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318		A0A0B4J2C4	111 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	FAM240A	A0A1B0GVK7	77 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318		C9JAW5	83 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	SUMO2	P61956	95 aa	Known RBP	11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	C1orf158	Q8N1D5	194 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	C14orf178	Q8N769	122 aa	Predicted RBP	11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	JPT2	Q9H910	190 aa		11.17	□□□□□ -0.62
DDX39A-209	ENST00000589318	TRAV26-2	A0A0B4J265	109 aa		11.16	□□□□□ -0.62
DDX39A-209	ENST00000589318	LINC00315	P59091	139 aa		11.16	□□□□□ -0.62
DDX39A-209	ENST00000589318	WFDC9	Q8NEX5	89 aa		11.16	□□□□□ -0.62
DDX39A-209	ENST00000589318	RASL10A	Q92737	203 aa		11.16	□□□□□ -0.62
DDX39A-209	ENST00000589318	DPH3P1	Q9H4G8	78 aa		11.16	□□□□□ -0.62
DDX39A-209	ENST00000589318	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.15	□□□□□ -0.62
DDX39A-209	ENST00000589318	HTN1	P15515	57 aa		11.15	□□□□□ -0.62
DDX39A-209	ENST00000589318	POM121L12	Q8N7R1	296 aa		11.15	□□□□□ -0.62
DDX39A-209	ENST00000589318	MEIG1	Q5JSS6	88 aa		11.15	□□□□□ -0.62
DDX39A-209	ENST00000589318	C2orf66	Q6UXQ4	117 aa		11.15	□□□□□ -0.62
DDX39A-209	ENST00000589318	TRBV10-2	A0A0K0K1G8	114 aa		11.14	□□□□□ -0.63
DDX39A-209	ENST00000589318	SFTA2	Q6UW10	78 aa		11.14	□□□□□ -0.63
DDX39A-209	ENST00000589318	C15orf53	Q8NAA6	179 aa		11.14	□□□□□ -0.63
DDX39A-209	ENST00000589318	C11orf72	Q8NBR9	251 aa		11.14	□□□□□ -0.63
DDX39A-209	ENST00000589318	LINC01587	Q99440	93 aa		11.14	□□□□□ -0.63
DDX39A-209	ENST00000589318	C11orf86	A6NJI1	115 aa		11.13	□□□□□ -0.63
DDX39A-209	ENST00000589318	TMEM141	Q96I45	108 aa		11.13	□□□□□ -0.63
DDX39A-209	ENST00000589318	IGHV3-33	P01772	117 aa		11.13	□□□□□ -0.63
DDX39A-209	ENST00000589318	RPL35A	P18077	110 aa	Known RBP	11.13	□□□□□ -0.63
DDX39A-209	ENST00000589318	STAB1	Q9NY15	2570 aa		11.12	□□□□□ -0.63
DDX39A-209	ENST00000589318	LINC01620	Q4KN68	170 aa		11.12	□□□□□ -0.63
DDX39A-209	ENST00000589318	NTN5	Q8WTR8	489 aa	Predicted RBP	11.12	□□□□□ -0.63
DDX39A-209	ENST00000589318	UBE2W	Q96B02	151 aa		11.12	□□□□□ -0.63
DDX39A-209	ENST00000589318	IMUP	Q9GZP8	106 aa		11.12	□□□□□ -0.63
DDX39A-209	ENST00000589318	WIPF1	O43516	503 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	ZNF876P	Q49A33	203 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	NACA	E9PAV3	2078 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318		A0A087WWL8	130 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	TRBV7-7	A0A0K0K1E9	115 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318		H3BT86	120 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	CRYGD	P07320	174 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	MGP	P08493	103 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	ZNF415	Q09FC8	603 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	PMVK	Q15126	192 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	CSNK1G2-AS1	Q8NCQ2	148 aa		11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	TMEM263	Q8WUH6	116 aa	Known RBP	11.11	□□□□□ -0.63
DDX39A-209	ENST00000589318	TRBV30	A0A0K0K1B3	111 aa		11.1	□□□□□ -0.63
DDX39A-209	ENST00000589318	CMYA5	Q8N3K9	4069 aa		11.1	□□□□□ -0.63
DDX39A-209	ENST00000589318	IGHV3OR16-12	A0A075B7B8	117 aa		11.09	□□□□□ -0.63
DDX39A-209	ENST00000589318	IL17D	Q8TAD2	202 aa		11.09	□□□□□ -0.63
DDX39A-209	ENST00000589318		M0R2P5	195 aa		11.09	□□□□□ -0.63
DDX39A-209	ENST00000589318	DEFB121	Q5J5C9	76 aa		11.09	□□□□□ -0.63
DDX39A-209	ENST00000589318	RPL39L	Q96EH5	51 aa	Known RBP	11.09	□□□□□ -0.63
DDX39A-209	ENST00000589318	TIMM17A	Q99595	171 aa		11.09	□□□□□ -0.63
DDX39A-209	ENST00000589318	IGLV4-69	A0A075B6H9	119 aa		11.08	□□□□□ -0.64
DDX39A-209	ENST00000589318	LGALS3	P17931	250 aa	Known RBP	11.08	□□□□□ -0.64
DDX39A-209	ENST00000589318	PIK3CD-AS1	Q5SR53	167 aa		11.08	□□□□□ -0.64
DDX39A-209	ENST00000589318	ATP5G1	P05496	136 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	ACYP1	P07311	99 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	SUMO4	Q6EEV6	95 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	DNAJC30	Q96LL9	226 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318		J3QQQ9	107 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	TMEM170B	Q5T4T1	132 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	FAM74A4	Q5TZK3	123 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	C3orf56	Q8N813	242 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	TMEM101	Q96IK0	257 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318	SPX	Q9BT56	116 aa		11.07	□□□□□ -0.64
DDX39A-209	ENST00000589318		A4D1N5	150 aa		11.06	□□□□□ -0.64
DDX39A-209	ENST00000589318	LEPROT	O15243	131 aa		11.05	□□□□□ -0.64
DDX39A-209	ENST00000589318	SDHAF1	A6NFY7	115 aa		11.05	□□□□□ -0.64
DDX39A-209	ENST00000589318	IGIP	A6NJ69	53 aa		11.05	□□□□□ -0.64
DDX39A-209	ENST00000589318	COX6C	P09669	75 aa		11.05	□□□□□ -0.64
DDX39A-209	ENST00000589318	AMELX	Q99217	191 aa		11.05	□□□□□ -0.64
DDX39A-209	ENST00000589318	PLAC8L1	A1L4L8	177 aa		11.04	□□□□□ -0.64
DDX39A-209	ENST00000589318		M0QY20	66 aa		11.04	□□□□□ -0.64
DDX39A-209	ENST00000589318	C5orf47	Q569G3	176 aa		11.04	□□□□□ -0.64
DDX39A-209	ENST00000589318	C2orf82	Q6UX34	121 aa		11.04	□□□□□ -0.64
DDX39A-209	ENST00000589318	COL6A5	A8TX70	2615 aa		11.04	□□□□□ -0.64
DDX39A-209	ENST00000589318	PKD1L1	Q8TDX9	2849 aa		11.04	□□□□□ -0.64
DDX39A-209	ENST00000589318	TEX49	A0A1B0GTD5	131 aa		11.03	□□□□□ -0.64
DDX39A-209	ENST00000589318		F5H697	171 aa		11.03	□□□□□ -0.64
DDX39A-209	ENST00000589318	ZNF56	Q15929	161 aa		11.03	□□□□□ -0.64
DDX39A-209	ENST00000589318		Q1RN00	199 aa		11.03	□□□□□ -0.64
DDX39A-209	ENST00000589318	TRBV6-5	A0A0K0K1A5	114 aa		11.01	□□□□□ -0.65
DDX39A-209	ENST00000589318		A0A1B0GX51	115 aa		11.01	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms