RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 C10orf126Q8N4M7 172 aa13.46□□□□□ -0.25
DNMT1-216ENST00000588952 OR5A1Q8NGJ0 315 aa13.46□□□□□ -0.25
DNMT1-216ENST00000588952 TOMM6Q96B49 74 aa13.46□□□□□ -0.25
DNMT1-216ENST00000588952 CHCHD1Q96BP2 118 aaKnown RBP13.46□□□□□ -0.25
DNMT1-216ENST00000588952 TIMM21Q9BVV7 248 aa13.46□□□□□ -0.25
DNMT1-216ENST00000588952 RYR3Q15413 4870 aa13.45□□□□□ -0.26
DNMT1-216ENST00000588952 DNAH10Q8IVF4 4471 aa13.45□□□□□ -0.26
DNMT1-216ENST00000588952 K7EP13 123 aa13.45□□□□□ -0.26
DNMT1-216ENST00000588952 RNASE13Q5GAN3 156 aaKnown RBP13.45□□□□□ -0.26
DNMT1-216ENST00000588952 ENHOQ6UWT2 76 aa13.45□□□□□ -0.26
DNMT1-216ENST00000588952 CDC42SE2Q9NRR3 84 aa13.45□□□□□ -0.26
DNMT1-216ENST00000588952 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
DNMT1-216ENST00000588952 UBE2WQ96B02 151 aa13.44□□□□□ -0.26
DNMT1-216ENST00000588952 TMEM101Q96IK0 257 aa13.44□□□□□ -0.26
DNMT1-216ENST00000588952 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
DNMT1-216ENST00000588952 CSDC2Q9Y534 153 aaKnown RBP13.44□□□□□ -0.26
DNMT1-216ENST00000588952 IGIPA6NJ69 53 aa13.43□□□□□ -0.26
DNMT1-216ENST00000588952 Q9HAA7 133 aa13.43□□□□□ -0.26
DNMT1-216ENST00000588952 PYGO1Q9Y3Y4 419 aa13.43□□□□□ -0.26
DNMT1-216ENST00000588952 IGLV4-3A0A075B6K6 122 aa13.42□□□□□ -0.26
DNMT1-216ENST00000588952 DGAT2L7PQ6IED9 249 aa13.42□□□□□ -0.26
DNMT1-216ENST00000588952 FAM19A2Q8N3H0 131 aa13.42□□□□□ -0.26
DNMT1-216ENST00000588952 ZNF664Q8N3J9 261 aa13.42□□□□□ -0.26
DNMT1-216ENST00000588952 FRAS1Q86XX4 4008 aa13.41□□□□□ -0.26
DNMT1-216ENST00000588952 HBDP02042 147 aa13.41□□□□□ -0.26
DNMT1-216ENST00000588952 MRPS36P82909 103 aaKnown RBP13.41□□□□□ -0.26
DNMT1-216ENST00000588952 REG3AQ06141 175 aa13.41□□□□□ -0.26
DNMT1-216ENST00000588952 SMAGPQ0VAQ4 97 aa13.41□□□□□ -0.26
DNMT1-216ENST00000588952 PDZD11Q5EBL8 140 aa13.41□□□□□ -0.26
DNMT1-216ENST00000588952 IGKV3OR2-268A0A0C4DH90 116 aa13.4□□□□□ -0.26
DNMT1-216ENST00000588952 HSBP1O75506 76 aa13.4□□□□□ -0.26
DNMT1-216ENST00000588952 G0S2P27469 103 aa13.4□□□□□ -0.26
DNMT1-216ENST00000588952 ZC2HC1BQ5TFG8 222 aa13.4□□□□□ -0.26
DNMT1-216ENST00000588952 SCGB3A1Q96QR1 104 aa13.4□□□□□ -0.26
DNMT1-216ENST00000588952 CRPP02741 224 aa13.39□□□□□ -0.27
DNMT1-216ENST00000588952 NDUFA6P56556 154 aa13.39□□□□□ -0.27
DNMT1-216ENST00000588952 C6orf223Q8N319 242 aa13.39□□□□□ -0.27
DNMT1-216ENST00000588952 TIMM17AQ99595 171 aa13.39□□□□□ -0.27
DNMT1-216ENST00000588952 COA6Q5JTJ3 125 aaKnown RBP13.38□□□□□ -0.27
DNMT1-216ENST00000588952 Q6ZRN7 208 aaPredicted RBP13.38□□□□□ -0.27
DNMT1-216ENST00000588952 LINC00173Q6ZV60 143 aa13.38□□□□□ -0.27
DNMT1-216ENST00000588952 ERASQ7Z444 233 aa13.38□□□□□ -0.27
DNMT1-216ENST00000588952 DNAH17Q9UFH2 4485 aa13.37□□□□□ -0.27
DNMT1-216ENST00000588952 TRAV8-3A0A0A6YYJ7 113 aa13.37□□□□□ -0.27
DNMT1-216ENST00000588952 C1orf134Q5TEV5 83 aa13.37□□□□□ -0.27
DNMT1-216ENST00000588952 TMEM141Q96I45 108 aa13.37□□□□□ -0.27
DNMT1-216ENST00000588952 IGLV10-54A0A075B6I4 117 aa13.36□□□□□ -0.27
DNMT1-216ENST00000588952 LINC00959A0A1B0GUT2 108 aa13.35□□□□□ -0.27
DNMT1-216ENST00000588952 RTL8CO15255 209 aa13.35□□□□□ -0.27
DNMT1-216ENST00000588952 MIAQ16674 131 aa13.35□□□□□ -0.27
DNMT1-216ENST00000588952 KRTAP26-1Q6PEX3 210 aa13.35□□□□□ -0.27
DNMT1-216ENST00000588952 AMELXQ99217 191 aa13.35□□□□□ -0.27
DNMT1-216ENST00000588952 IGKV2D-24A0A075B6R9 120 aa13.34□□□□□ -0.27
DNMT1-216ENST00000588952 LINC01549A6NIU2 74 aa13.34□□□□□ -0.27
DNMT1-216ENST00000588952 NPSP0C0P6 89 aa13.34□□□□□ -0.27
DNMT1-216ENST00000588952 TRAV13-1A0A0B4J241 112 aa13.33□□□□□ -0.28
DNMT1-216ENST00000588952 BAALCQ8WXS3 180 aa13.33□□□□□ -0.28
DNMT1-216ENST00000588952 IFITM10A6NMD0 228 aa13.32□□□□□ -0.28
DNMT1-216ENST00000588952 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
DNMT1-216ENST00000588952 MAPKAPK5-AS1Q8N8E1 139 aa13.32□□□□□ -0.28
DNMT1-216ENST00000588952 C1orf43Q9BWL3 253 aa13.32□□□□□ -0.28
DNMT1-216ENST00000588952 FAT2Q9NYQ8 4349 aa13.31□□□□□ -0.28
DNMT1-216ENST00000588952 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-216ENST00000588952 Q6ZN92 141 aa13.31□□□□□ -0.28
DNMT1-216ENST00000588952 TEX43Q6ZNM6 134 aa13.31□□□□□ -0.28
DNMT1-216ENST00000588952 CHCHD10Q8WYQ3 142 aaPredicted RBP13.31□□□□□ -0.28
DNMT1-216ENST00000588952 VCX2Q9H322 139 aa13.31□□□□□ -0.28
DNMT1-216ENST00000588952 TRAV8-4A0A0B4J246 113 aa13.3□□□□□ -0.28
DNMT1-216ENST00000588952 ATP5LO75964 103 aa13.3□□□□□ -0.28
DNMT1-216ENST00000588952 RMI2Q96E14 147 aa13.3□□□□□ -0.28
DNMT1-216ENST00000588952 PRSS29PA6NIE9 313 aa13.29□□□□□ -0.28
DNMT1-216ENST00000588952 CCL25O15444 150 aa13.29□□□□□ -0.28
DNMT1-216ENST00000588952 FABP4P15090 132 aa13.29□□□□□ -0.28
DNMT1-216ENST00000588952 XCL1P47992 114 aa13.29□□□□□ -0.28
DNMT1-216ENST00000588952 UBE2D1P51668 147 aa13.29□□□□□ -0.28
DNMT1-216ENST00000588952 GAGE12HA6NDE8 117 aa13.28□□□□□ -0.28
DNMT1-216ENST00000588952 LEPROTL1O95214 131 aa13.28□□□□□ -0.28
DNMT1-216ENST00000588952 SS18Q15532 418 aa13.28□□□□□ -0.28
DNMT1-216ENST00000588952 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
DNMT1-216ENST00000588952 TM2D2Q9BX73 214 aa13.28□□□□□ -0.28
DNMT1-216ENST00000588952 CST9LQ9H4G1 147 aa13.28□□□□□ -0.28
DNMT1-216ENST00000588952 FOXI1Q12951 378 aa13.27□□□□□ -0.29
DNMT1-216ENST00000588952 PMVKQ15126 192 aa13.27□□□□□ -0.29
DNMT1-216ENST00000588952 PAPPA-AS1Q5QFB9 102 aa13.27□□□□□ -0.29
DNMT1-216ENST00000588952 C2orf88Q9BSF0 95 aa13.27□□□□□ -0.29
DNMT1-216ENST00000588952 WFDC2Q14508 124 aa13.26□□□□□ -0.29
DNMT1-216ENST00000588952 LINC00242Q5T6M2 205 aa13.26□□□□□ -0.29
DNMT1-216ENST00000588952 PSCAO43653 123 aa13.25□□□□□ -0.29
DNMT1-216ENST00000588952 COX6A2Q02221 97 aa13.25□□□□□ -0.29
DNMT1-216ENST00000588952 TNP2Q05952 138 aa13.25□□□□□ -0.29
DNMT1-216ENST00000588952 HIST3H2BBQ8N257 126 aa13.25□□□□□ -0.29
DNMT1-216ENST00000588952 COX11Q9Y6N1 276 aa13.25□□□□□ -0.29
DNMT1-216ENST00000588952 HSPB8Q9UJY1 196 aa13.24□□□□□ -0.29
DNMT1-216ENST00000588952 A0A0J9YXV3 536 aa13.23□□□□□ -0.29
DNMT1-216ENST00000588952 LRCOL1A6NCL2 159 aa13.23□□□□□ -0.29
DNMT1-216ENST00000588952 LECT2O14960 151 aa13.23□□□□□ -0.29
DNMT1-216ENST00000588952 S100A6P06703 90 aa13.23□□□□□ -0.29
DNMT1-216ENST00000588952 CD164L2Q6UWJ8 174 aa13.23□□□□□ -0.29
DNMT1-216ENST00000588952 FAM19A3Q7Z5A8 133 aa13.23□□□□□ -0.29
DNMT1-216ENST00000588952 DNAH11Q96DT5 4516 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms