RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 MIAQ16674 131 aa12.66□□□□□ -0.38
CLPTM1-209ENST00000588855 SMAGPQ0VAQ4 97 aa12.65□□□□□ -0.38
CLPTM1-209ENST00000588855 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
CLPTM1-209ENST00000588855 FA2HQ7L5A8 372 aa12.65□□□□□ -0.38
CLPTM1-209ENST00000588855 TIMM21Q9BVV7 248 aa12.65□□□□□ -0.38
CLPTM1-209ENST00000588855 CDC42SE2Q9NRR3 84 aa12.65□□□□□ -0.38
CLPTM1-209ENST00000588855 IGKV3OR2-268A0A0C4DH90 116 aa12.64□□□□□ -0.39
CLPTM1-209ENST00000588855 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
CLPTM1-209ENST00000588855 PSCAO43653 123 aa12.64□□□□□ -0.39
CLPTM1-209ENST00000588855 RMI2Q96E14 147 aa12.64□□□□□ -0.39
CLPTM1-209ENST00000588855 C1orf43Q9BWL3 253 aa12.64□□□□□ -0.39
CLPTM1-209ENST00000588855 CSDC2Q9Y534 153 aaKnown RBP12.64□□□□□ -0.39
CLPTM1-209ENST00000588855 C2orf66Q6UXQ4 117 aa12.63□□□□□ -0.39
CLPTM1-209ENST00000588855 Q6ZUT4 128 aa12.63□□□□□ -0.39
CLPTM1-209ENST00000588855 ZNF664Q8N3J9 261 aa12.63□□□□□ -0.39
CLPTM1-209ENST00000588855 URB1-AS1Q96HZ7 61 aa12.63□□□□□ -0.39
CLPTM1-209ENST00000588855 TM2D2Q9BX73 214 aa12.63□□□□□ -0.39
CLPTM1-209ENST00000588855 SPANXA1Q9NS26 97 aa12.63□□□□□ -0.39
CLPTM1-209ENST00000588855 CYSLTR1Q9Y271 337 aa12.63□□□□□ -0.39
CLPTM1-209ENST00000588855 IGLV10-54A0A075B6I4 117 aa12.62□□□□□ -0.39
CLPTM1-209ENST00000588855 RNASE13Q5GAN3 156 aaKnown RBP12.62□□□□□ -0.39
CLPTM1-209ENST00000588855 FAM104AQ969W3 186 aa12.62□□□□□ -0.39
CLPTM1-209ENST00000588855 MAPKAPK5-AS1Q8N8E1 139 aa12.61□□□□□ -0.39
CLPTM1-209ENST00000588855 OPRPNQ99935 248 aaPredicted RBP12.61□□□□□ -0.39
CLPTM1-209ENST00000588855 COX11Q9Y6N1 276 aa12.61□□□□□ -0.39
CLPTM1-209ENST00000588855 PKHD1P08F94 4074 aa12.6□□□□□ -0.39
CLPTM1-209ENST00000588855 AP5S1Q9NUS5 200 aa12.6□□□□□ -0.39
CLPTM1-209ENST00000588855 TRAV8-4A0A0B4J246 113 aa12.59□□□□□ -0.39
CLPTM1-209ENST00000588855 LINC00614P0C842 121 aa12.59□□□□□ -0.39
CLPTM1-209ENST00000588855 KRTAP26-1Q6PEX3 210 aa12.59□□□□□ -0.39
CLPTM1-209ENST00000588855 PYGO1Q9Y3Y4 419 aa12.59□□□□□ -0.39
CLPTM1-209ENST00000588855 LRCOL1A6NCL2 159 aa12.58□□□□□ -0.4
CLPTM1-209ENST00000588855 MRPS36P82909 103 aaKnown RBP12.58□□□□□ -0.4
CLPTM1-209ENST00000588855 TOMM6Q96B49 74 aa12.58□□□□□ -0.4
CLPTM1-209ENST00000588855 IGLV4-3A0A075B6K6 122 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 A0A087WTM6 91 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 LINC00959A0A1B0GUT2 108 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 A0A1B0GVY2 172 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 G0S2P27469 103 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 IGIPA6NJ69 53 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 RAB5BP61020 215 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 WFDC2Q14508 124 aa12.57□□□□□ -0.4
CLPTM1-209ENST00000588855 A0A096LNJ9 63 aa12.56□□□□□ -0.4
CLPTM1-209ENST00000588855 BAALCQ8WXS3 180 aa12.56□□□□□ -0.4
CLPTM1-209ENST00000588855 CHCHD10Q8WYQ3 142 aaPredicted RBP12.56□□□□□ -0.4
CLPTM1-209ENST00000588855 DNAH5Q8TE73 4624 aa12.56□□□□□ -0.4
CLPTM1-209ENST00000588855 LECT2O14960 151 aa12.55□□□□□ -0.4
CLPTM1-209ENST00000588855 PMCHL1Q16048 86 aa12.55□□□□□ -0.4
CLPTM1-209ENST00000588855 TMEM141Q96I45 108 aa12.55□□□□□ -0.4
CLPTM1-209ENST00000588855 TRAV13-1A0A0B4J241 112 aa12.54□□□□□ -0.4
CLPTM1-209ENST00000588855 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
CLPTM1-209ENST00000588855 BAGE3Q86Y29 109 aa12.54□□□□□ -0.4
CLPTM1-209ENST00000588855 TIMM17AQ99595 171 aa12.54□□□□□ -0.4
CLPTM1-209ENST00000588855 CCL25O15444 150 aa12.53□□□□□ -0.4
CLPTM1-209ENST00000588855 SS18Q15532 418 aa12.53□□□□□ -0.4
CLPTM1-209ENST00000588855 CHCHD1Q96BP2 118 aaKnown RBP12.53□□□□□ -0.4
CLPTM1-209ENST00000588855 SCGB3A1Q96QR1 104 aa12.53□□□□□ -0.4
CLPTM1-209ENST00000588855 IFITM10A6NMD0 228 aa12.52□□□□□ -0.4
CLPTM1-209ENST00000588855 HBDP02042 147 aa12.52□□□□□ -0.4
CLPTM1-209ENST00000588855 XCL1P47992 114 aa12.52□□□□□ -0.4
CLPTM1-209ENST00000588855 ZC2HC1BQ5TFG8 222 aa12.52□□□□□ -0.4
CLPTM1-209ENST00000588855 ERASQ7Z444 233 aa12.52□□□□□ -0.4
CLPTM1-209ENST00000588855 DYNC1H1Q14204 4646 aaKnown RBP12.52□□□□□ -0.41
CLPTM1-209ENST00000588855 LINC01549A6NIU2 74 aa12.52□□□□□ -0.41
CLPTM1-209ENST00000588855 NPSP0C0P6 89 aa12.52□□□□□ -0.41
CLPTM1-209ENST00000588855 LINC00310P59036 64 aa12.52□□□□□ -0.41
CLPTM1-209ENST00000588855 Q6ZN92 141 aa12.52□□□□□ -0.41
CLPTM1-209ENST00000588855 TEX43Q6ZNM6 134 aa12.52□□□□□ -0.41
CLPTM1-209ENST00000588855 LINC00173Q6ZV60 143 aa12.52□□□□□ -0.41
CLPTM1-209ENST00000588855 EREGO14944 169 aa12.51□□□□□ -0.41
CLPTM1-209ENST00000588855 C1orf196B1AJZ1 125 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BKO60814 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 SERF1AO75920 110 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BJP06899 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BOP23527 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BBP33778 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BDP58876 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BCP62807 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 FOXI1Q12951 378 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST2H2BEQ16778 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BHQ93079 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 AMELXQ99217 191 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BNQ99877 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 HIST1H2BMQ99879 126 aa12.5□□□□□ -0.41
CLPTM1-209ENST00000588855 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
CLPTM1-209ENST00000588855 KRTAP10-2P60368 255 aa12.49□□□□□ -0.41
CLPTM1-209ENST00000588855 SPATA12Q7Z6I5 190 aa12.49□□□□□ -0.41
CLPTM1-209ENST00000588855 Q8N814 137 aa12.49□□□□□ -0.41
CLPTM1-209ENST00000588855 VCX2Q9H322 139 aa12.49□□□□□ -0.41
CLPTM1-209ENST00000588855 HSBP1O75506 76 aa12.48□□□□□ -0.41
CLPTM1-209ENST00000588855 FUSP35637 526 aaKnown RBP eCLIP12.48□□□□□ -0.41
CLPTM1-209ENST00000588855 CD164L2Q6UWJ8 174 aa12.48□□□□□ -0.41
CLPTM1-209ENST00000588855 PDZD11Q5EBL8 140 aa12.47□□□□□ -0.41
CLPTM1-209ENST00000588855 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
CLPTM1-209ENST00000588855 C2orf88Q9BSF0 95 aa12.47□□□□□ -0.41
CLPTM1-209ENST00000588855 FAM19A2Q8N3H0 131 aa12.47□□□□□ -0.41
CLPTM1-209ENST00000588855 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.46□□□□□ -0.42
CLPTM1-209ENST00000588855 NUPR1O60356 82 aa12.46□□□□□ -0.42
CLPTM1-209ENST00000588855 UBE2D1P51668 147 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms