RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ENHOQ6UWT2 76 aa6.09□□□□□ -1.43
CIRBP-218ENST00000588344 FA2HQ7L5A8 372 aa6.09□□□□□ -1.43
CIRBP-218ENST00000588344 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
CIRBP-218ENST00000588344 C1orf43Q9BWL3 253 aa6.09□□□□□ -1.43
CIRBP-218ENST00000588344 CDC42SE2Q9NRR3 84 aa6.09□□□□□ -1.43
CIRBP-218ENST00000588344 CYSLTR1Q9Y271 337 aa6.09□□□□□ -1.43
CIRBP-218ENST00000588344 UBE2D4Q9Y2X8 147 aa6.09□□□□□ -1.43
CIRBP-218ENST00000588344 EREGO14944 169 aa6.08□□□□□ -1.44
CIRBP-218ENST00000588344 MRPS36P82909 103 aaKnown RBP6.08□□□□□ -1.44
CIRBP-218ENST00000588344 PAPPA-AS1Q5QFB9 102 aa6.08□□□□□ -1.44
CIRBP-218ENST00000588344 Q8N3U1 123 aa6.08□□□□□ -1.44
CIRBP-218ENST00000588344 Q9HAA7 133 aa6.08□□□□□ -1.44
CIRBP-218ENST00000588344 AP5S1Q9NUS5 200 aa6.08□□□□□ -1.44
CIRBP-218ENST00000588344 IGKV2D-24A0A075B6R9 120 aa6.07□□□□□ -1.44
CIRBP-218ENST00000588344 PRSS29PA6NIE9 313 aa6.07□□□□□ -1.44
CIRBP-218ENST00000588344 TRGC2P03986 189 aa6.07□□□□□ -1.44
CIRBP-218ENST00000588344 Q6ZRN7 208 aaPredicted RBP6.07□□□□□ -1.44
CIRBP-218ENST00000588344 C18orf32Q8TCD1 76 aa6.07□□□□□ -1.44
CIRBP-218ENST00000588344 C1orf196B1AJZ1 125 aa6.06□□□□□ -1.44
CIRBP-218ENST00000588344 SCO1O75880 301 aa6.06□□□□□ -1.44
CIRBP-218ENST00000588344 SS18Q15532 418 aa6.06□□□□□ -1.44
CIRBP-218ENST00000588344 C2orf66Q6UXQ4 117 aa6.06□□□□□ -1.44
CIRBP-218ENST00000588344 Q6ZN92 141 aa6.06□□□□□ -1.44
CIRBP-218ENST00000588344 TOMM6Q96B49 74 aa6.06□□□□□ -1.44
CIRBP-218ENST00000588344 CHCHD1Q96BP2 118 aaKnown RBP6.06□□□□□ -1.44
CIRBP-218ENST00000588344 DNAH2Q9P225 4427 aa6.06□□□□□ -1.44
CIRBP-218ENST00000588344 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
CIRBP-218ENST00000588344 ERASQ7Z444 233 aa6.05□□□□□ -1.44
CIRBP-218ENST00000588344 BAGE3Q86Y29 109 aa6.05□□□□□ -1.44
CIRBP-218ENST00000588344 TMEM141Q96I45 108 aa6.05□□□□□ -1.44
CIRBP-218ENST00000588344 TIMM17AQ99595 171 aa6.05□□□□□ -1.44
CIRBP-218ENST00000588344 VCX2Q9H322 139 aa6.05□□□□□ -1.44
CIRBP-218ENST00000588344 LINC00959A0A1B0GUT2 108 aa6.04□□□□□ -1.44
CIRBP-218ENST00000588344 IGIPA6NJ69 53 aa6.04□□□□□ -1.44
CIRBP-218ENST00000588344 C14orf177Q52M58 125 aa6.04□□□□□ -1.44
CIRBP-218ENST00000588344 CFAP161Q6P656 301 aa6.04□□□□□ -1.44
CIRBP-218ENST00000588344 SCGB3A1Q96QR1 104 aa6.04□□□□□ -1.44
CIRBP-218ENST00000588344 IGLV4-3A0A075B6K6 122 aa6.03□□□□□ -1.44
CIRBP-218ENST00000588344 TNP2Q05952 138 aa6.03□□□□□ -1.44
CIRBP-218ENST00000588344 CLPSL2Q6UWE3 100 aa6.03□□□□□ -1.44
CIRBP-218ENST00000588344 TEX43Q6ZNM6 134 aa6.03□□□□□ -1.44
CIRBP-218ENST00000588344 C2orf88Q9BSF0 95 aa6.03□□□□□ -1.44
CIRBP-218ENST00000588344 PGPEP1Q9NXJ5 209 aa6.03□□□□□ -1.44
CIRBP-218ENST00000588344 A0A087WTM6 91 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 IGKV3OR2-268A0A0C4DH90 116 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 LRCOL1A6NCL2 159 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.02□□□□□ -1.45
CIRBP-218ENST00000588344 ATP5LO75964 103 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 HBDP02042 147 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 SEC11AP67812 179 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 CD164L2Q6UWJ8 174 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 Q6ZUT4 128 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 CHCHD10Q8WYQ3 142 aaPredicted RBP6.02□□□□□ -1.45
CIRBP-218ENST00000588344 AMELXQ99217 191 aa6.02□□□□□ -1.45
CIRBP-218ENST00000588344 FRAS1Q86XX4 4008 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 IGLV10-54A0A075B6I4 117 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 TRAV13-1A0A0B4J241 112 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 IFITM10A6NMD0 228 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 HSBP1O75506 76 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 CDPF1Q6NVV7 123 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 KRTAP26-1Q6PEX3 210 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 NTN5Q8WTR8 489 aaPredicted RBP6.01□□□□□ -1.45
CIRBP-218ENST00000588344 URB1-AS1Q96HZ7 61 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 DNAH10Q8IVF4 4471 aa6.01□□□□□ -1.45
CIRBP-218ENST00000588344 XCL1P47992 114 aa6□□□□□ -1.45
CIRBP-218ENST00000588344 Q8N814 137 aa6□□□□□ -1.45
CIRBP-218ENST00000588344 MAPKAPK5-AS1Q8N8E1 139 aa6□□□□□ -1.45
CIRBP-218ENST00000588344 BAALCQ8WXS3 180 aa6□□□□□ -1.45
CIRBP-218ENST00000588344 FAM104AQ969W3 186 aa6□□□□□ -1.45
CIRBP-218ENST00000588344 OPRPNQ99935 248 aaPredicted RBP6□□□□□ -1.45
CIRBP-218ENST00000588344 DNAH17Q9UFH2 4485 aa6□□□□□ -1.45
CIRBP-218ENST00000588344 A0A1B0GVY2 172 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 COX7A2LO14548 114 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BKO60814 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BJP06899 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BOP23527 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BBP33778 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BDP58876 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BCP62807 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 FOXI1Q12951 378 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 PMVKQ15126 192 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST2H2BEQ16778 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 PDZD11Q5EBL8 140 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 RNASE13Q5GAN3 156 aaKnown RBP5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.99□□□□□ -1.45
CIRBP-218ENST00000588344 FAM19A3Q7Z5A8 133 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BHQ93079 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BNQ99877 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 HIST1H2BMQ99879 126 aa5.99□□□□□ -1.45
CIRBP-218ENST00000588344 A0A096LNJ9 63 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 IGHV1-58A0A0C4DH39 117 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 USP17L23D6RBM5 183 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 SERF1AO75920 110 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 APOMO95445 188 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 MALP21145 153 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 UBE2D1P51668 147 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 HERVK_113P63121 156 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 LINC01561Q8N1V8 128 aa5.98□□□□□ -1.45
CIRBP-218ENST00000588344 CST9LQ9H4G1 147 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms