RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ARL17AQ8IVW1 177 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 C10orf126Q8N4M7 172 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 C1QTNF4Q9BXJ3 329 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 PYGO1Q9Y3Y4 419 aa10.56□□□□□ -0.72
CCDC43-203ENST00000588210 PSMB2P49721 201 aa10.55□□□□□ -0.72
CCDC43-203ENST00000588210 SIGMAR1Q99720 223 aa10.55□□□□□ -0.72
CCDC43-203ENST00000588210 TRAV2A0A0B4J234 112 aa10.54□□□□□ -0.72
CCDC43-203ENST00000588210 A8MZ25 164 aa10.54□□□□□ -0.72
CCDC43-203ENST00000588210 VCX2Q9H322 139 aa10.54□□□□□ -0.72
CCDC43-203ENST00000588210 TRBV20-1A0A075B6N2 111 aa10.54□□□□□ -0.72
CCDC43-203ENST00000588210 KNCNA6PVL3 124 aa10.54□□□□□ -0.72
CCDC43-203ENST00000588210 CRYBA4P53673 196 aa10.54□□□□□ -0.72
CCDC43-203ENST00000588210 PIK3CD-AS1Q5SR53 167 aa10.54□□□□□ -0.72
CCDC43-203ENST00000588210 A0A0J9YXV3 536 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 IGHV4-30-4P0DP06 118 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 AZU1P20160 251 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
CCDC43-203ENST00000588210 FAM110AQ9BQ89 295 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 RBMY1BA6NDE4 496 aaKnown RBP10.53□□□□□ -0.72
CCDC43-203ENST00000588210 RBMY1EA6NEQ0 496 aaKnown RBP10.53□□□□□ -0.72
CCDC43-203ENST00000588210 A8MWV9 139 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 H3BMM0 161 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 RBMY1DP0C7P1 496 aaKnown RBP10.53□□□□□ -0.72
CCDC43-203ENST00000588210 DEFB131AP59861 70 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 FOXI1Q12951 378 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 PTH2Q96A98 100 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 GTSF1LQ9H1H1 148 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 C19orf73Q9NVV2 129 aa10.53□□□□□ -0.72
CCDC43-203ENST00000588210 SFTA2Q6UW10 78 aa10.52□□□□□ -0.73
CCDC43-203ENST00000588210 M0R2P5 195 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 TCL1BO95988 128 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 ZNF415Q09FC8 603 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 FAM104AQ969W3 186 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 B9D2Q9BPU9 175 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 A0A0B4J2C4 111 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 A4D1N5 150 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 MRPS36P82909 103 aaKnown RBP10.51□□□□□ -0.73
CCDC43-203ENST00000588210 SBSPONQ8IVN8 264 aa10.51□□□□□ -0.73
CCDC43-203ENST00000588210 ODF3L2Q3SX64 289 aa10.5□□□□□ -0.73
CCDC43-203ENST00000588210 WFDC10AQ9H1F0 79 aa10.5□□□□□ -0.73
CCDC43-203ENST00000588210 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
CCDC43-203ENST00000588210 IGHV3-73A0A0B4J1V6 119 aa10.49□□□□□ -0.73
CCDC43-203ENST00000588210 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
CCDC43-203ENST00000588210 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
CCDC43-203ENST00000588210 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
CCDC43-203ENST00000588210 A0A0J9YXY3 114 aa10.49□□□□□ -0.73
CCDC43-203ENST00000588210 EIF4EBP3O60516 100 aaPredicted RBP10.49□□□□□ -0.73
CCDC43-203ENST00000588210 TIMM21Q9BVV7 248 aa10.49□□□□□ -0.73
CCDC43-203ENST00000588210 IGHV3-33P01772 117 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 IGHV3-30-3P0DP02 117 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 HTN1P15515 57 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 MAP6D1Q9H9H5 199 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 MUSTN1Q8IVN3 82 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 SPANXA1Q9NS26 97 aa10.48□□□□□ -0.73
CCDC43-203ENST00000588210 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.47□□□□□ -0.73
CCDC43-203ENST00000588210 PPDPFLQ8WWR9 84 aa10.47□□□□□ -0.73
CCDC43-203ENST00000588210 CHCHD7Q9BUK0 85 aa10.47□□□□□ -0.73
CCDC43-203ENST00000588210 C11orf72Q8NBR9 251 aa10.46□□□□□ -0.73
CCDC43-203ENST00000588210 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.73
CCDC43-203ENST00000588210 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
CCDC43-203ENST00000588210 IGHV1-58A0A0C4DH39 117 aa10.46□□□□□ -0.74
CCDC43-203ENST00000588210 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.74
CCDC43-203ENST00000588210 SCGB1C2P0DMR2 95 aa10.46□□□□□ -0.74
CCDC43-203ENST00000588210 Q6ZSN1 163 aa10.46□□□□□ -0.74
CCDC43-203ENST00000588210 LITAFQ99732 161 aa10.46□□□□□ -0.74
CCDC43-203ENST00000588210 SPXQ9BT56 116 aa10.46□□□□□ -0.74
CCDC43-203ENST00000588210 DNAH9Q9NYC9 4486 aa10.46□□□□□ -0.74
CCDC43-203ENST00000588210 M0QXV9 152 aa10.45□□□□□ -0.74
CCDC43-203ENST00000588210 NHLRC4P0CG21 123 aaPredicted RBP10.45□□□□□ -0.74
CCDC43-203ENST00000588210 ERG28Q9UKR5 140 aa10.45□□□□□ -0.74
CCDC43-203ENST00000588210 IGHV3-53P01767 116 aa10.45□□□□□ -0.74
CCDC43-203ENST00000588210 CEMP1Q6PRD7 247 aaPredicted RBP10.45□□□□□ -0.74
CCDC43-203ENST00000588210 CARD19Q96LW7 228 aa10.45□□□□□ -0.74
CCDC43-203ENST00000588210 INSP01308 110 aa10.44□□□□□ -0.74
CCDC43-203ENST00000588210 PRM2P04554 102 aa10.44□□□□□ -0.74
CCDC43-203ENST00000588210 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
CCDC43-203ENST00000588210 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
CCDC43-203ENST00000588210 CDIP1Q9H305 208 aa10.43□□□□□ -0.74
CCDC43-203ENST00000588210 Q9UF83 564 aa10.43□□□□□ -0.74
CCDC43-203ENST00000588210 TRAV8-3A0A0A6YYJ7 113 aa10.43□□□□□ -0.74
CCDC43-203ENST00000588210 RS1O15537 224 aa10.43□□□□□ -0.74
CCDC43-203ENST00000588210 VSIG2Q96IQ7 327 aa10.43□□□□□ -0.74
CCDC43-203ENST00000588210 CLUHP3Q96NS8 147 aa10.43□□□□□ -0.74
CCDC43-203ENST00000588210 LINC01587Q99440 93 aa10.43□□□□□ -0.74
CCDC43-203ENST00000588210 RNASE13Q5GAN3 156 aaKnown RBP10.42□□□□□ -0.74
CCDC43-203ENST00000588210 Q6ZUT4 128 aa10.42□□□□□ -0.74
CCDC43-203ENST00000588210 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
CCDC43-203ENST00000588210 NDUFA12Q9UI09 145 aa10.42□□□□□ -0.74
CCDC43-203ENST00000588210 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.42□□□□□ -0.74
CCDC43-203ENST00000588210 IGKV2-29A2NJV5 120 aaPredicted RBP10.42□□□□□ -0.74
CCDC43-203ENST00000588210 TM2D3Q9BRN9 247 aa10.42□□□□□ -0.74
CCDC43-203ENST00000588210 SLC25A20O43772 301 aa10.41□□□□□ -0.74
CCDC43-203ENST00000588210 APOC4P55056 127 aa10.41□□□□□ -0.74
CCDC43-203ENST00000588210 STHQ8IWL8 128 aa10.41□□□□□ -0.74
CCDC43-203ENST00000588210 KIR2DL5BQ8NHK3 375 aa10.41□□□□□ -0.74
CCDC43-203ENST00000588210 ZFAND6Q6FIF0 208 aa10.4□□□□□ -0.74
CCDC43-203ENST00000588210 TRBV30A0A0K0K1B3 111 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms