RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 UBE2D2P62837 147 aa13.08□□□□□ -0.32
RETREG3-205ENST00000586870 CHAC1Q9BUX1 264 aa13.08□□□□□ -0.32
RETREG3-205ENST00000586870 TIMM21Q9BVV7 248 aa13.08□□□□□ -0.32
RETREG3-205ENST00000586870 DNAH9Q9NYC9 4486 aa13.08□□□□□ -0.32
RETREG3-205ENST00000586870 LINC00612Q8N6U2 182 aa13.07□□□□□ -0.32
RETREG3-205ENST00000586870 FAM104AQ969W3 186 aa13.07□□□□□ -0.32
RETREG3-205ENST00000586870 X6R8D5 127 aa13.07□□□□□ -0.32
RETREG3-205ENST00000586870 TMEM170BQ5T4T1 132 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-205ENST00000586870 TRGV4A0A0C4DH28 118 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 IGKV2-29A2NJV5 120 aaPredicted RBP13.06□□□□□ -0.32
RETREG3-205ENST00000586870 GAGE12JA6NER3 117 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 GAGE1Q13065 139 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 GAGE4Q13068 117 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 GAGE5Q13069 117 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 TAL2Q16559 108 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 GAGE13Q4V321 117 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 COX11Q9Y6N1 276 aa13.06□□□□□ -0.32
RETREG3-205ENST00000586870 COL7A1Q02388 2944 aa13.05□□□□□ -0.32
RETREG3-205ENST00000586870 A6NDN8 102 aa13.05□□□□□ -0.32
RETREG3-205ENST00000586870 MRPS36P82909 103 aaKnown RBP13.05□□□□□ -0.32
RETREG3-205ENST00000586870 FHL2Q14192 279 aa13.04□□□□□ -0.32
RETREG3-205ENST00000586870 NBEAL2Q6ZNJ1 2754 aa13.04□□□□□ -0.32
RETREG3-205ENST00000586870 A0A0J9YWU9 116 aa13.03□□□□□ -0.32
RETREG3-205ENST00000586870 A0A0J9YXV3 536 aa13.03□□□□□ -0.32
RETREG3-205ENST00000586870 TAX1BP3O14907 124 aa13.03□□□□□ -0.32
RETREG3-205ENST00000586870 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
RETREG3-205ENST00000586870 CEMP1Q6PRD7 247 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-205ENST00000586870 GTSF1LQ9H1H1 148 aa13.03□□□□□ -0.32
RETREG3-205ENST00000586870 TMEM223A0PJW6 202 aa13.02□□□□□ -0.32
RETREG3-205ENST00000586870 ZNF22P17026 224 aaPredicted RBP13.02□□□□□ -0.32
RETREG3-205ENST00000586870 ZNF815PA8K554 130 aa13.02□□□□□ -0.33
RETREG3-205ENST00000586870 DGAT2L7PQ6IED9 249 aa13.02□□□□□ -0.33
RETREG3-205ENST00000586870 MIFP14174 115 aa13.01□□□□□ -0.33
RETREG3-205ENST00000586870 NTM-AS1Q6ZSK4 140 aa13.01□□□□□ -0.33
RETREG3-205ENST00000586870 TM2D2Q9BX73 214 aa13.01□□□□□ -0.33
RETREG3-205ENST00000586870 CSDC2Q9Y534 153 aaKnown RBP13.01□□□□□ -0.33
RETREG3-205ENST00000586870 LYRM9A8MSI8 78 aa13□□□□□ -0.33
RETREG3-205ENST00000586870 LEPROTO15243 131 aa13□□□□□ -0.33
RETREG3-205ENST00000586870 DEFB4AO15263 64 aa13□□□□□ -0.33
RETREG3-205ENST00000586870 Q6ZUT4 128 aa13□□□□□ -0.33
RETREG3-205ENST00000586870 MUC7Q8TAX7 377 aa13□□□□□ -0.33
RETREG3-205ENST00000586870 TINCRA0A1B0GVN0 87 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 DEFB130BP0DP73 79 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 DEFB130AP0DP74 79 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 GCSHP23434 173 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 Q6ZVH6 145 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 CEND1Q8N111 149 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 HUWE1Q7Z6Z7 4374 aaKnown RBP12.99□□□□□ -0.33
RETREG3-205ENST00000586870 IGHV4-28A0A0C4DH34 117 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 H3BRM9 83 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 LINC00469Q8N7U9 141 aa12.99□□□□□ -0.33
RETREG3-205ENST00000586870 LOC100131303A0A0U1RQF7 123 aa12.98□□□□□ -0.33
RETREG3-205ENST00000586870 H7C423 109 aa12.98□□□□□ -0.33
RETREG3-205ENST00000586870 J3QQQ9 107 aa12.98□□□□□ -0.33
RETREG3-205ENST00000586870 PLEKHB2Q96CS7 222 aa12.98□□□□□ -0.33
RETREG3-205ENST00000586870 TMEM243Q9BU79 118 aa12.98□□□□□ -0.33
RETREG3-205ENST00000586870 LINC00694P0DN24 101 aa12.97□□□□□ -0.33
RETREG3-205ENST00000586870 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
RETREG3-205ENST00000586870 RNASE13Q5GAN3 156 aaKnown RBP12.97□□□□□ -0.33
RETREG3-205ENST00000586870 HIST1H4GQ99525 98 aa12.97□□□□□ -0.33
RETREG3-205ENST00000586870 C11orf68Q9H3H3 251 aaKnown RBP12.97□□□□□ -0.33
RETREG3-205ENST00000586870 C3orf84H3BNL1 204 aa12.96□□□□□ -0.33
RETREG3-205ENST00000586870 UBE2D1P51668 147 aa12.96□□□□□ -0.33
RETREG3-205ENST00000586870 SCGB1D4Q6XE38 83 aa12.96□□□□□ -0.33
RETREG3-205ENST00000586870 Q8NAQ8 132 aa12.96□□□□□ -0.33
RETREG3-205ENST00000586870 PTTG1IPP53801 180 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 FXYD2P54710 66 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 TIRAPP58753 221 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 TSPEAR-AS2P59090 65 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 FAM222AQ5U5X8 452 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 TENM3Q9P273 2699 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
RETREG3-205ENST00000586870 UBE2L6O14933 153 aa12.94□□□□□ -0.34
RETREG3-205ENST00000586870 SMIM13P0DJ93 91 aa12.94□□□□□ -0.34
RETREG3-205ENST00000586870 FAM19A3Q7Z5A8 133 aa12.93□□□□□ -0.34
RETREG3-205ENST00000586870 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
RETREG3-205ENST00000586870 GEMIN7Q9H840 131 aaKnown RBP12.93□□□□□ -0.34
RETREG3-205ENST00000586870 STAB2Q8WWQ8 2551 aa12.93□□□□□ -0.34
RETREG3-205ENST00000586870 A0A0J9YY99 117 aa12.92□□□□□ -0.34
RETREG3-205ENST00000586870 C9orf118A6NHY6 69 aa12.92□□□□□ -0.34
RETREG3-205ENST00000586870 AMMECR1LQ6DCA0 310 aa12.92□□□□□ -0.34
RETREG3-205ENST00000586870 TMEM101Q96IK0 257 aa12.92□□□□□ -0.34
RETREG3-205ENST00000586870 PRO0255Q9UI72 69 aa12.92□□□□□ -0.34
RETREG3-205ENST00000586870 IGLV5-45A0A087WSX0 123 aa12.91□□□□□ -0.34
RETREG3-205ENST00000586870 CDC42SE2Q9NRR3 84 aa12.91□□□□□ -0.34
RETREG3-205ENST00000586870 SPANXB1Q9NS25 103 aaPredicted RBP12.91□□□□□ -0.34
RETREG3-205ENST00000586870 TRBV6-8A0A0A6YYG3 113 aa12.91□□□□□ -0.34
RETREG3-205ENST00000586870 IGHV1-58A0A0C4DH39 117 aa12.91□□□□□ -0.34
RETREG3-205ENST00000586870 VAMP3Q15836 100 aa12.91□□□□□ -0.34
RETREG3-205ENST00000586870 K7EP13 123 aa12.9□□□□□ -0.34
RETREG3-205ENST00000586870 IGHV3-30-3P0DP02 117 aa12.9□□□□□ -0.34
RETREG3-205ENST00000586870 NANOS2P60321 138 aaKnown RBP12.9□□□□□ -0.34
RETREG3-205ENST00000586870 UBE2V1Q13404 147 aa12.9□□□□□ -0.34
RETREG3-205ENST00000586870 IGHV3-64A0A075B6Q5 118 aa12.89□□□□□ -0.35
RETREG3-205ENST00000586870 SPART-AS1P0CW21 52 aa12.89□□□□□ -0.35
RETREG3-205ENST00000586870 GYPEP15421 78 aa12.89□□□□□ -0.35
RETREG3-205ENST00000586870 HERVK_113P63121 156 aa12.89□□□□□ -0.35
RETREG3-205ENST00000586870 SRSF9Q13242 221 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms