RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CHCHD7Q9BUK0 85 aa10.32□□□□□ -0.76
SKA2-209ENST00000583976 GNB1LQ9BYB4 327 aa10.32□□□□□ -0.76
SKA2-209ENST00000583976 LOC389332A0A1B0GUA5 103 aa10.31□□□□□ -0.76
SKA2-209ENST00000583976 HLA-DQA1P01909 254 aa10.31□□□□□ -0.76
SKA2-209ENST00000583976 PKIAP61925 76 aa10.31□□□□□ -0.76
SKA2-209ENST00000583976 RBX1P62877 108 aa10.31□□□□□ -0.76
SKA2-209ENST00000583976 UBE2WQ96B02 151 aa10.31□□□□□ -0.76
SKA2-209ENST00000583976 PKHD1L1Q86WI1 4243 aa10.3□□□□□ -0.76
SKA2-209ENST00000583976 PHOX2AO14813 284 aa10.3□□□□□ -0.76
SKA2-209ENST00000583976 COX19Q49B96 90 aa10.3□□□□□ -0.76
SKA2-209ENST00000583976 CBLN2Q8IUK8 224 aa10.3□□□□□ -0.76
SKA2-209ENST00000583976 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
SKA2-209ENST00000583976 IGLV4-60A0A075B6I1 120 aa10.29□□□□□ -0.76
SKA2-209ENST00000583976 CLPSL2Q6UWE3 100 aa10.29□□□□□ -0.76
SKA2-209ENST00000583976 MRPL18Q9H0U6 180 aaKnown RBP10.29□□□□□ -0.76
SKA2-209ENST00000583976 TCAPO15273 167 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 ESDP10768 282 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 RPL32P62910 135 aaKnown RBP10.28□□□□□ -0.76
SKA2-209ENST00000583976 FABP9Q0Z7S8 132 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 AMMECR1LQ6DCA0 310 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 RNASEKQ6P5S7 137 aaKnown RBP10.28□□□□□ -0.76
SKA2-209ENST00000583976 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 LINC00269Q8N2A0 174 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 MAP1LC3AQ9H492 121 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 SMCO4Q9NRQ5 59 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 LAMTOR2Q9Y2Q5 125 aa10.28□□□□□ -0.76
SKA2-209ENST00000583976 TRAV8-3A0A0A6YYJ7 113 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 CRPP02741 224 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 MT-ND6P03923 174 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 FGF6P10767 208 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 ENHOQ6UWT2 76 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 BAALCQ8WXS3 180 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 TM2D2Q9BX73 214 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 TRAPPC1Q9Y5R8 145 aa10.27□□□□□ -0.77
SKA2-209ENST00000583976 A0A1B0GUV1 79 aa10.26□□□□□ -0.77
SKA2-209ENST00000583976 PLA2G1BP04054 148 aaKnown RBP10.26□□□□□ -0.77
SKA2-209ENST00000583976 YPEL4Q96NS1 127 aa10.26□□□□□ -0.77
SKA2-209ENST00000583976 IGKV2D-24A0A075B6R9 120 aa10.25□□□□□ -0.77
SKA2-209ENST00000583976 PRSS47A8MTI9 375 aa10.25□□□□□ -0.77
SKA2-209ENST00000583976 H7C423 109 aa10.25□□□□□ -0.77
SKA2-209ENST00000583976 RAB5AP20339 215 aa10.25□□□□□ -0.77
SKA2-209ENST00000583976 UBR4Q5T4S7 5183 aa10.25□□□□□ -0.77
SKA2-209ENST00000583976 IGKV3OR2-268A0A0C4DH90 116 aa10.24□□□□□ -0.77
SKA2-209ENST00000583976 KRTAP10-4P60372 401 aaPredicted RBP10.24□□□□□ -0.77
SKA2-209ENST00000583976 REG3AQ06141 175 aa10.24□□□□□ -0.77
SKA2-209ENST00000583976 Q0VG73 95 aa10.24□□□□□ -0.77
SKA2-209ENST00000583976 Q8N8P6 123 aa10.24□□□□□ -0.77
SKA2-209ENST00000583976 TMEM101Q96IK0 257 aa10.24□□□□□ -0.77
SKA2-209ENST00000583976 ALKBH7Q9BT30 221 aaPredicted RBP10.24□□□□□ -0.77
SKA2-209ENST00000583976 KRTAP29-1A8MX34 341 aaPredicted RBP10.23□□□□□ -0.77
SKA2-209ENST00000583976 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
SKA2-209ENST00000583976 RMI2Q96E14 147 aa10.23□□□□□ -0.77
SKA2-209ENST00000583976 IGLV10-54A0A075B6I4 117 aa10.22□□□□□ -0.77
SKA2-209ENST00000583976 RPL39P62891 51 aaKnown RBP10.22□□□□□ -0.77
SKA2-209ENST00000583976 DGAT2L7PQ6IED9 249 aa10.22□□□□□ -0.77
SKA2-209ENST00000583976 OR5A1Q8NGJ0 315 aa10.22□□□□□ -0.77
SKA2-209ENST00000583976 TMEM18Q96B42 140 aa10.22□□□□□ -0.77
SKA2-209ENST00000583976 C1orf43Q9BWL3 253 aa10.22□□□□□ -0.77
SKA2-209ENST00000583976 PRR34Q9NV39 138 aa10.22□□□□□ -0.77
SKA2-209ENST00000583976 SCO1O75880 301 aa10.21□□□□□ -0.77
SKA2-209ENST00000583976 ZNF25P17030 456 aaPredicted RBP10.21□□□□□ -0.77
SKA2-209ENST00000583976 MIAQ16674 131 aa10.21□□□□□ -0.77
SKA2-209ENST00000583976 MRPL52Q86TS9 123 aaKnown RBP10.21□□□□□ -0.77
SKA2-209ENST00000583976 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.77
SKA2-209ENST00000583976 UBE2D4Q9Y2X8 147 aa10.21□□□□□ -0.77
SKA2-209ENST00000583976 NXT2Q9NPJ8 142 aaKnown RBP10.2□□□□□ -0.78
SKA2-209ENST00000583976 COX11Q9Y6N1 276 aa10.2□□□□□ -0.78
SKA2-209ENST00000583976 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
SKA2-209ENST00000583976 ZNF664Q8N3J9 261 aa10.19□□□□□ -0.78
SKA2-209ENST00000583976 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
SKA2-209ENST00000583976 CDC42SE2Q9NRR3 84 aa10.19□□□□□ -0.78
SKA2-209ENST00000583976 SMAGPQ0VAQ4 97 aa10.18□□□□□ -0.78
SKA2-209ENST00000583976 ORMDL2Q53FV1 153 aa10.18□□□□□ -0.78
SKA2-209ENST00000583976 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
SKA2-209ENST00000583976 Q6ZUT4 128 aa10.17□□□□□ -0.78
SKA2-209ENST00000583976 OPRPNQ99935 248 aaPredicted RBP10.17□□□□□ -0.78
SKA2-209ENST00000583976 TRAV8-4A0A0B4J246 113 aa10.16□□□□□ -0.78
SKA2-209ENST00000583976 COLCA2A8K830 154 aa10.16□□□□□ -0.78
SKA2-209ENST00000583976 FA2HQ7L5A8 372 aa10.16□□□□□ -0.78
SKA2-209ENST00000583976 C18orf32Q8TCD1 76 aa10.16□□□□□ -0.78
SKA2-209ENST00000583976 TIMM21Q9BVV7 248 aa10.16□□□□□ -0.78
SKA2-209ENST00000583976 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
SKA2-209ENST00000583976 K7EMI3 77 aa10.15□□□□□ -0.78
SKA2-209ENST00000583976 TRGC2P03986 189 aa10.15□□□□□ -0.78
SKA2-209ENST00000583976 KRTAP26-1Q6PEX3 210 aa10.15□□□□□ -0.78
SKA2-209ENST00000583976 C2orf66Q6UXQ4 117 aa10.15□□□□□ -0.78
SKA2-209ENST00000583976 SPANXA1Q9NS26 97 aa10.15□□□□□ -0.78
SKA2-209ENST00000583976 CYSLTR1Q9Y271 337 aa10.15□□□□□ -0.78
SKA2-209ENST00000583976 LINC00959A0A1B0GUT2 108 aa10.14□□□□□ -0.79
SKA2-209ENST00000583976 GAGE12HA6NDE8 117 aa10.13□□□□□ -0.79
SKA2-209ENST00000583976 ATP6V1G1O75348 118 aa10.13□□□□□ -0.79
SKA2-209ENST00000583976 HNRNPA3P51991 378 aaKnown RBP10.13□□□□□ -0.79
SKA2-209ENST00000583976 CHCHD10Q8WYQ3 142 aaPredicted RBP10.13□□□□□ -0.79
SKA2-209ENST00000583976 FAM104AQ969W3 186 aa10.13□□□□□ -0.79
SKA2-209ENST00000583976 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
SKA2-209ENST00000583976 XCL1P47992 114 aa10.12□□□□□ -0.79
SKA2-209ENST00000583976 SS18Q15532 418 aa10.12□□□□□ -0.79
SKA2-209ENST00000583976 IGLV4-3A0A075B6K6 122 aa10.11□□□□□ -0.79
SKA2-209ENST00000583976 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms