RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 MAP1LC3B2A6NCE7 125 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 INMT-MINDY4F8WBC2 141 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 G3V3Q6 166 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 I3L3M4 83 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 CTAG1AP78358 180 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 SPAG11BQ08648 103 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 LINC00173Q6ZV60 143 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 MAP1LC3BQ9GZQ8 125 aa6.54□□□□□ -1.36
CASC3-208ENST00000583649 MRPL35Q9NZE8 188 aaKnown RBP6.54□□□□□ -1.36
CASC3-208ENST00000583649 NDUFA1O15239 70 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 NUPR1O60356 82 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 IGLC6P0CF74 106 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 TWIST1Q15672 202 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 ZNF726P1Q15940 193 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 LINC00337Q8N6G1 96 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 OR10D4PQ8NGN7 298 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 RETNLBQ9BQ08 111 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 CDC42SE2Q9NRR3 84 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 ALG5Q9Y673 324 aa6.53□□□□□ -1.36
CASC3-208ENST00000583649 SDHAF1A6NFY7 115 aa6.52□□□□□ -1.37
CASC3-208ENST00000583649 IFNA1P01562 189 aa6.52□□□□□ -1.37
CASC3-208ENST00000583649 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
CASC3-208ENST00000583649 FAM168BA1KXE4 195 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 PAGE4O60829 102 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 TLX1NBP0CAT3 122 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 GAGE2EQ4V326 116 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 TMUB2Q71RG4 321 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 MRPL52Q86TS9 123 aaKnown RBP6.51□□□□□ -1.37
CASC3-208ENST00000583649 GATD1Q8NB37 220 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 BIN3Q9NQY0 253 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 GAGE2DQ9UEU5 116 aa6.51□□□□□ -1.37
CASC3-208ENST00000583649 MUC17Q685J3 4493 aa6.5□□□□□ -1.37
CASC3-208ENST00000583649 SCO2A0A1W2PP80 73 aa6.5□□□□□ -1.37
CASC3-208ENST00000583649 LYZL1Q6UWQ5 148 aa6.5□□□□□ -1.37
CASC3-208ENST00000583649 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
CASC3-208ENST00000583649 LINC00304Q8N9R0 145 aa6.5□□□□□ -1.37
CASC3-208ENST00000583649 TSHBP01222 138 aa6.49□□□□□ -1.37
CASC3-208ENST00000583649 LBHQ53QV2 105 aaPredicted RBP6.49□□□□□ -1.37
CASC3-208ENST00000583649 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
CASC3-208ENST00000583649 PPDPFQ9H3Y8 114 aa6.49□□□□□ -1.37
CASC3-208ENST00000583649 A0A087X002 238 aa6.48□□□□□ -1.37
CASC3-208ENST00000583649 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
CASC3-208ENST00000583649 C7orf77A4D0Y5 90 aa6.48□□□□□ -1.37
CASC3-208ENST00000583649 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
CASC3-208ENST00000583649 SEC61BP60468 96 aaKnown RBP6.48□□□□□ -1.37
CASC3-208ENST00000583649 RPL7L1Q6DKI1 246 aaKnown RBP6.48□□□□□ -1.37
CASC3-208ENST00000583649 C9orf62Q8N4C0 152 aa6.48□□□□□ -1.37
CASC3-208ENST00000583649 SMDT1Q9H4I9 107 aa6.48□□□□□ -1.37
CASC3-208ENST00000583649 CYTL1Q9NRR1 136 aa6.48□□□□□ -1.37
CASC3-208ENST00000583649 RPL35P42766 123 aaKnown RBP6.47□□□□□ -1.37
CASC3-208ENST00000583649 ORAOV1Q8WV07 137 aa6.47□□□□□ -1.37
CASC3-208ENST00000583649 RPL39LQ96EH5 51 aaKnown RBP6.47□□□□□ -1.37
CASC3-208ENST00000583649 SMIM12Q96EX1 92 aa6.47□□□□□ -1.37
CASC3-208ENST00000583649 MARVELD1Q9BSK0 173 aa6.47□□□□□ -1.37
CASC3-208ENST00000583649 ST20Q9HBF5 79 aa6.47□□□□□ -1.37
CASC3-208ENST00000583649 CSDC2Q9Y534 153 aaKnown RBP6.47□□□□□ -1.37
CASC3-208ENST00000583649 IGKV2D-26A0A0A0MRZ7 120 aa6.46□□□□□ -1.38
CASC3-208ENST00000583649 ASB16-AS1Q495Z4 193 aa6.46□□□□□ -1.38
CASC3-208ENST00000583649 S100ZQ8WXG8 99 aa6.46□□□□□ -1.38
CASC3-208ENST00000583649 TRBV6-5A0A0K0K1A5 114 aa6.45□□□□□ -1.38
CASC3-208ENST00000583649 FCER1GP30273 86 aa6.45□□□□□ -1.38
CASC3-208ENST00000583649 CTRLP40313 264 aa6.45□□□□□ -1.38
CASC3-208ENST00000583649 SFT2D1Q8WV19 159 aa6.45□□□□□ -1.38
CASC3-208ENST00000583649 TMEM18Q96B42 140 aa6.45□□□□□ -1.38
CASC3-208ENST00000583649 PACRGQ96M98 296 aaPredicted RBP6.45□□□□□ -1.38
CASC3-208ENST00000583649 CTDSP1Q9GZU7 261 aa6.45□□□□□ -1.38
CASC3-208ENST00000583649 A0A1B0GVG6 124 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 NDUFC2-KCTD14E9PQ53 114 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 GNG4P50150 75 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 FAM229BQ4G0N7 80 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 CENPWQ5EE01 88 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 FP248Q71RG6 208 aaPredicted RBP6.44□□□□□ -1.38
CASC3-208ENST00000583649 KCNRGQ8N5I3 272 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 CNFNQ9BYD5 112 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 TMEM242Q9NWH2 141 aa6.44□□□□□ -1.38
CASC3-208ENST00000583649 TRBV30A0A0K0K1B3 111 aa6.43□□□□□ -1.38
CASC3-208ENST00000583649 RAB19A4D1S5 217 aa6.43□□□□□ -1.38
CASC3-208ENST00000583649 BCE1O60756 84 aa6.43□□□□□ -1.38
CASC3-208ENST00000583649 DEFA1P59665 94 aa6.43□□□□□ -1.38
CASC3-208ENST00000583649 LINC00299Q6ZSB3 139 aa6.43□□□□□ -1.38
CASC3-208ENST00000583649 UPK1BO75841 260 aa6.42□□□□□ -1.38
CASC3-208ENST00000583649 UNQ6190/PRO20217Q6UXQ8 127 aa6.42□□□□□ -1.38
CASC3-208ENST00000583649 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
CASC3-208ENST00000583649 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
CASC3-208ENST00000583649 UMAD1C9J7I0 102 aa6.41□□□□□ -1.38
CASC3-208ENST00000583649 VCYO14598 125 aa6.41□□□□□ -1.38
CASC3-208ENST00000583649 SPAG11AQ6PDA7 123 aa6.41□□□□□ -1.38
CASC3-208ENST00000583649 BORCS7Q96B45 105 aa6.41□□□□□ -1.38
CASC3-208ENST00000583649 KIR2DL4Q99706 377 aa6.41□□□□□ -1.38
CASC3-208ENST00000583649 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 A0A1B0GV50 99 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 PPP1R17O96001 155 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 CCL20P78556 96 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 FAM213BQ8TBF2 198 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 MANBALQ9NQG1 85 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 UBE2D4Q9Y2X8 147 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
CASC3-208ENST00000583649 FXYD6-FXYD2A0A087WZ82 144 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms