RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 APOC3P02656 99 aa16.38■□□□□ 0.21
TSEN54-209ENST00000583454 ZNF25P17030 456 aaPredicted RBP16.38■□□□□ 0.21
TSEN54-209ENST00000583454 Q5VSD8 79 aa16.38■□□□□ 0.21
TSEN54-209ENST00000583454 KRTAP26-1Q6PEX3 210 aa16.38■□□□□ 0.21
TSEN54-209ENST00000583454 Q8N814 137 aa16.38■□□□□ 0.21
TSEN54-209ENST00000583454 BAALCQ8WXS3 180 aa16.38■□□□□ 0.21
TSEN54-209ENST00000583454 FLG2Q5D862 2391 aaPredicted RBP16.37■□□□□ 0.21
TSEN54-209ENST00000583454 RNASEKQ6P5S7 137 aaKnown RBP16.37■□□□□ 0.21
TSEN54-209ENST00000583454 LAMTOR2Q9Y2Q5 125 aa16.37■□□□□ 0.21
TSEN54-209ENST00000583454 TRAV8-4A0A0B4J246 113 aa16.36■□□□□ 0.21
TSEN54-209ENST00000583454 TCAPO15273 167 aa16.36■□□□□ 0.21
TSEN54-209ENST00000583454 GCSHP23434 173 aa16.36■□□□□ 0.21
TSEN54-209ENST00000583454 NDUFA5Q16718 116 aa16.36■□□□□ 0.21
TSEN54-209ENST00000583454 MRPL52Q86TS9 123 aaKnown RBP16.36■□□□□ 0.21
TSEN54-209ENST00000583454 PRSS47A8MTI9 375 aa16.35■□□□□ 0.21
TSEN54-209ENST00000583454 INAFM2P0DMQ5 153 aa16.35■□□□□ 0.21
TSEN54-209ENST00000583454 SVBPQ8N300 66 aa16.35■□□□□ 0.21
TSEN54-209ENST00000583454 NTN5Q8WTR8 489 aaPredicted RBP16.35■□□□□ 0.21
TSEN54-209ENST00000583454 LECT2O14960 151 aa16.34■□□□□ 0.21
TSEN54-209ENST00000583454 SNAPINO95295 136 aa16.33■□□□□ 0.2
TSEN54-209ENST00000583454 TMEM101Q96IK0 257 aa16.33■□□□□ 0.2
TSEN54-209ENST00000583454 OR5A1Q8NGJ0 315 aa16.32■□□□□ 0.2
TSEN54-209ENST00000583454 IGLV10-54A0A075B6I4 117 aa16.31■□□□□ 0.2
TSEN54-209ENST00000583454 HAMPP81172 84 aa16.31■□□□□ 0.2
TSEN54-209ENST00000583454 GNB1LQ9BYB4 327 aa16.31■□□□□ 0.2
TSEN54-209ENST00000583454 CDC42SE2Q9NRR3 84 aa16.31■□□□□ 0.2
TSEN54-209ENST00000583454 HLA-DQA1P01909 254 aa16.3■□□□□ 0.2
TSEN54-209ENST00000583454 SMR3BP02814 79 aaPredicted RBP16.3■□□□□ 0.2
TSEN54-209ENST00000583454 CSDC2Q9Y534 153 aaKnown RBP16.3■□□□□ 0.2
TSEN54-209ENST00000583454 IGLV5-52A0A0A0MRZ9 124 aa16.29■□□□□ 0.2
TSEN54-209ENST00000583454 COX19Q49B96 90 aa16.29■□□□□ 0.2
TSEN54-209ENST00000583454 TIMM21Q9BVV7 248 aa16.29■□□□□ 0.2
TSEN54-209ENST00000583454 MAP1LC3AQ9H492 121 aa16.29■□□□□ 0.2
TSEN54-209ENST00000583454 UBE2D4Q9Y2X8 147 aa16.29■□□□□ 0.2
TSEN54-209ENST00000583454 SMAGPQ0VAQ4 97 aa16.28■□□□□ 0.2
TSEN54-209ENST00000583454 TMEM18Q96B42 140 aa16.28■□□□□ 0.2
TSEN54-209ENST00000583454 SLC7A5P1Q8MH63 180 aa16.27■□□□□ 0.2
TSEN54-209ENST00000583454 ZNF664Q8N3J9 261 aa16.27■□□□□ 0.2
TSEN54-209ENST00000583454 IGKV3OR2-268A0A0C4DH90 116 aa16.26■□□□□ 0.19
TSEN54-209ENST00000583454 LOC389332A0A1B0GUA5 103 aa16.26■□□□□ 0.19
TSEN54-209ENST00000583454 RAB5AP20339 215 aa16.26■□□□□ 0.19
TSEN54-209ENST00000583454 KIAA1644Q3SXP7 199 aa16.26■□□□□ 0.19
TSEN54-209ENST00000583454 DGAT2L7PQ6IED9 249 aa16.26■□□□□ 0.19
TSEN54-209ENST00000583454 Q8N8P6 123 aa16.26■□□□□ 0.19
TSEN54-209ENST00000583454 USP17L23D6RBM5 183 aa16.25■□□□□ 0.19
TSEN54-209ENST00000583454 C14orf177Q52M58 125 aa16.25■□□□□ 0.19
TSEN54-209ENST00000583454 MT-ND6P03923 174 aa16.24■□□□□ 0.19
TSEN54-209ENST00000583454 RPL39P62891 51 aaKnown RBP16.24■□□□□ 0.19
TSEN54-209ENST00000583454 FAM30AQ9NZY2 134 aa16.24■□□□□ 0.19
TSEN54-209ENST00000583454 LINC00959A0A1B0GUT2 108 aa16.23■□□□□ 0.19
TSEN54-209ENST00000583454 CHCHD10Q8WYQ3 142 aaPredicted RBP16.23■□□□□ 0.19
TSEN54-209ENST00000583454 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.22■□□□□ 0.19
TSEN54-209ENST00000583454 TGIF2-C20orf24A0A0A6YYL0 155 aa16.22■□□□□ 0.19
TSEN54-209ENST00000583454 GAGE12HA6NDE8 117 aa16.21■□□□□ 0.19
TSEN54-209ENST00000583454 FAM104AQ969W3 186 aa16.21■□□□□ 0.19
TSEN54-209ENST00000583454 SPANXA1Q9NS26 97 aa16.21■□□□□ 0.19
TSEN54-209ENST00000583454 K7EMI3 77 aa16.2■□□□□ 0.18
TSEN54-209ENST00000583454 ALKBH7Q9BT30 221 aaPredicted RBP16.2■□□□□ 0.18
TSEN54-209ENST00000583454 MRPL18Q9H0U6 180 aaKnown RBP16.2■□□□□ 0.18
TSEN54-209ENST00000583454 NXT2Q9NPJ8 142 aaKnown RBP16.2■□□□□ 0.18
TSEN54-209ENST00000583454 PRSS1P07477 247 aa16.19■□□□□ 0.18
TSEN54-209ENST00000583454 IFI27P40305 119 aaPredicted RBP16.18■□□□□ 0.18
TSEN54-209ENST00000583454 FABP9Q0Z7S8 132 aa16.18■□□□□ 0.18
TSEN54-209ENST00000583454 Q6ZUT4 128 aa16.18■□□□□ 0.18
TSEN54-209ENST00000583454 YPEL4Q96NS1 127 aa16.18■□□□□ 0.18
TSEN54-209ENST00000583454 FAM229AH3BQW9 127 aa16.17■□□□□ 0.18
TSEN54-209ENST00000583454 MRPS36P82909 103 aaKnown RBP16.17■□□□□ 0.18
TSEN54-209ENST00000583454 SS18Q15532 418 aa16.17■□□□□ 0.18
TSEN54-209ENST00000583454 ORMDL2Q53FV1 153 aa16.17■□□□□ 0.18
TSEN54-209ENST00000583454 CCL25O15444 150 aa16.16■□□□□ 0.18
TSEN54-209ENST00000583454 FOXI1Q12951 378 aa16.16■□□□□ 0.18
TSEN54-209ENST00000583454 RNASE13Q5GAN3 156 aaKnown RBP16.16■□□□□ 0.18
TSEN54-209ENST00000583454 Q6ZSA8 131 aa16.16■□□□□ 0.18
TSEN54-209ENST00000583454 PYGO1Q9Y3Y4 419 aa16.16■□□□□ 0.18
TSEN54-209ENST00000583454 XCL1P47992 114 aa16.15■□□□□ 0.18
TSEN54-209ENST00000583454 C1orf196B1AJZ1 125 aa16.14■□□□□ 0.17
TSEN54-209ENST00000583454 OPRPNQ99935 248 aaPredicted RBP16.14■□□□□ 0.17
TSEN54-209ENST00000583454 CD164L2Q6UWJ8 174 aa16.13■□□□□ 0.17
TSEN54-209ENST00000583454 C15orf56Q8N910 161 aa16.13■□□□□ 0.17
TSEN54-209ENST00000583454 CYSLTR1Q9Y271 337 aa16.13■□□□□ 0.17
TSEN54-209ENST00000583454 TRAPPC1Q9Y5R8 145 aa16.13■□□□□ 0.17
TSEN54-209ENST00000583454 CFAP161Q6P656 301 aa16.12■□□□□ 0.17
TSEN54-209ENST00000583454 C2orf66Q6UXQ4 117 aa16.12■□□□□ 0.17
TSEN54-209ENST00000583454 TRAV13-1A0A0B4J241 112 aa16.11■□□□□ 0.17
TSEN54-209ENST00000583454 LINC01546A6NGU7 62 aa16.11■□□□□ 0.17
TSEN54-209ENST00000583454 PRSS3P2Q8NHM4 247 aa16.11■□□□□ 0.17
TSEN54-209ENST00000583454 SMCO4Q9NRQ5 59 aa16.11■□□□□ 0.17
TSEN54-209ENST00000583454 hDV102S1A0JD36 115 aa16.09■□□□□ 0.17
TSEN54-209ENST00000583454 G0S2P27469 103 aa16.09■□□□□ 0.17
TSEN54-209ENST00000583454 LINC01620Q4KN68 170 aa16.09■□□□□ 0.17
TSEN54-209ENST00000583454 IGLV4-3A0A075B6K6 122 aa16.08■□□□□ 0.16
TSEN54-209ENST00000583454 CNBPP62633 177 aaKnown RBP16.08■□□□□ 0.16
TSEN54-209ENST00000583454 CBLN2Q8IUK8 224 aa16.08■□□□□ 0.16
TSEN54-209ENST00000583454 LRP1Q07954 4544 aaKnown RBP16.07■□□□□ 0.16
TSEN54-209ENST00000583454 IGIPA6NJ69 53 aa16.07■□□□□ 0.16
TSEN54-209ENST00000583454 NPSP0C0P6 89 aa16.07■□□□□ 0.16
TSEN54-209ENST00000583454 SLPIP03973 132 aa16.06■□□□□ 0.16
TSEN54-209ENST00000583454 C9orf163Q8N9P6 203 aa16.06■□□□□ 0.16
TSEN54-209ENST00000583454 TMEM141Q96I45 108 aa16.06■□□□□ 0.16
TSEN54-209ENST00000583454 GVQW2A0A096LPI5 108 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms