RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 SPATA12Q7Z6I5 190 aa16.25■□□□□ 0.19
MIR3960-201ENST00000583311 UBE2D4Q9Y2X8 147 aa16.25■□□□□ 0.19
MIR3960-201ENST00000583311 ORMDL2Q53FV1 153 aa16.24■□□□□ 0.19
MIR3960-201ENST00000583311 ZNF664Q8N3J9 261 aa16.24■□□□□ 0.19
MIR3960-201ENST00000583311 YPEL4Q96NS1 127 aa16.24■□□□□ 0.19
MIR3960-201ENST00000583311 CDC42SE2Q9NRR3 84 aa16.24■□□□□ 0.19
MIR3960-201ENST00000583311 IGKV3OR2-268A0A0C4DH90 116 aa16.23■□□□□ 0.19
MIR3960-201ENST00000583311 CBLN2Q8IUK8 224 aa16.23■□□□□ 0.19
MIR3960-201ENST00000583311 SPANXA1Q9NS26 97 aa16.23■□□□□ 0.19
MIR3960-201ENST00000583311 PGPEP1Q9NXJ5 209 aa16.23■□□□□ 0.19
MIR3960-201ENST00000583311 IGLV10-54A0A075B6I4 117 aa16.22■□□□□ 0.19
MIR3960-201ENST00000583311 G0S2P27469 103 aa16.22■□□□□ 0.19
MIR3960-201ENST00000583311 IFI27P40305 119 aaPredicted RBP16.22■□□□□ 0.19
MIR3960-201ENST00000583311 MAPKAPK5-AS1Q8N8E1 139 aa16.22■□□□□ 0.19
MIR3960-201ENST00000583311 PRSS3P2Q8NHM4 247 aa16.22■□□□□ 0.19
MIR3960-201ENST00000583311 RPL39P62891 51 aaKnown RBP16.21■□□□□ 0.19
MIR3960-201ENST00000583311 Q8N814 137 aa16.21■□□□□ 0.19
MIR3960-201ENST00000583311 BAALCQ8WXS3 180 aa16.21■□□□□ 0.19
MIR3960-201ENST00000583311 CDPF1Q6NVV7 123 aa16.2■□□□□ 0.18
MIR3960-201ENST00000583311 DNAH11Q96DT5 4516 aa16.2■□□□□ 0.18
MIR3960-201ENST00000583311 C16orf90A8MZG2 172 aa16.18■□□□□ 0.18
MIR3960-201ENST00000583311 C14orf177Q52M58 125 aa16.18■□□□□ 0.18
MIR3960-201ENST00000583311 NTN5Q8WTR8 489 aaPredicted RBP16.18■□□□□ 0.18
MIR3960-201ENST00000583311 CYSLTR1Q9Y271 337 aa16.18■□□□□ 0.18
MIR3960-201ENST00000583311 LECT2O14960 151 aa16.17■□□□□ 0.18
MIR3960-201ENST00000583311 KRTAP10-2P60368 255 aa16.17■□□□□ 0.18
MIR3960-201ENST00000583311 SS18Q15532 418 aa16.17■□□□□ 0.18
MIR3960-201ENST00000583311 KRTAP26-1Q6PEX3 210 aa16.17■□□□□ 0.18
MIR3960-201ENST00000583311 LINC00959A0A1B0GUT2 108 aa16.16■□□□□ 0.18
MIR3960-201ENST00000583311 MRPS36P82909 103 aaKnown RBP16.16■□□□□ 0.18
MIR3960-201ENST00000583311 PYGO1Q9Y3Y4 419 aa16.16■□□□□ 0.18
MIR3960-201ENST00000583311 CCL25O15444 150 aa16.15■□□□□ 0.18
MIR3960-201ENST00000583311 C2orf66Q6UXQ4 117 aa16.15■□□□□ 0.18
MIR3960-201ENST00000583311 Q6ZUT4 128 aa16.15■□□□□ 0.18
MIR3960-201ENST00000583311 FA2HQ7L5A8 372 aa16.15■□□□□ 0.18
MIR3960-201ENST00000583311 CHCHD10Q8WYQ3 142 aaPredicted RBP16.15■□□□□ 0.18
MIR3960-201ENST00000583311 WFDC2Q14508 124 aa16.14■□□□□ 0.17
MIR3960-201ENST00000583311 GAGE12HA6NDE8 117 aa16.13■□□□□ 0.17
MIR3960-201ENST00000583311 LINC01546A6NGU7 62 aa16.12■□□□□ 0.17
MIR3960-201ENST00000583311 LINC01549A6NIU2 74 aa16.12■□□□□ 0.17
MIR3960-201ENST00000583311 USP17L23D6RBM5 183 aa16.12■□□□□ 0.17
MIR3960-201ENST00000583311 RNASE13Q5GAN3 156 aaKnown RBP16.12■□□□□ 0.17
MIR3960-201ENST00000583311 PKHD1P08F94 4074 aa16.11■□□□□ 0.17
MIR3960-201ENST00000583311 IGLV5-52A0A0A0MRZ9 124 aa16.11■□□□□ 0.17
MIR3960-201ENST00000583311 C1orf196B1AJZ1 125 aa16.11■□□□□ 0.17
MIR3960-201ENST00000583311 C18orf32Q8TCD1 76 aa16.11■□□□□ 0.17
MIR3960-201ENST00000583311 NPSP0C0P6 89 aa16.1■□□□□ 0.17
MIR3960-201ENST00000583311 XCL1P47992 114 aa16.1■□□□□ 0.17
MIR3960-201ENST00000583311 RAB5BP61020 215 aa16.09■□□□□ 0.17
MIR3960-201ENST00000583311 CFAP161Q6P656 301 aa16.09■□□□□ 0.17
MIR3960-201ENST00000583311 Q6ZN92 141 aa16.09■□□□□ 0.17
MIR3960-201ENST00000583311 TMEM141Q96I45 108 aa16.09■□□□□ 0.17
MIR3960-201ENST00000583311 TRAV13-1A0A0B4J241 112 aa16.08■□□□□ 0.16
MIR3960-201ENST00000583311 CD164L2Q6UWJ8 174 aa16.08■□□□□ 0.16
MIR3960-201ENST00000583311 TOMM6Q96B49 74 aa16.08■□□□□ 0.16
MIR3960-201ENST00000583311 AP5S1Q9NUS5 200 aa16.08■□□□□ 0.16
MIR3960-201ENST00000583311 BIRC6Q9NR09 4857 aa16.07■□□□□ 0.16
MIR3960-201ENST00000583311 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.07■□□□□ 0.16
MIR3960-201ENST00000583311 IGLV4-3A0A075B6K6 122 aa16.07■□□□□ 0.16
MIR3960-201ENST00000583311 IFITM10A6NMD0 228 aa16.07■□□□□ 0.16
MIR3960-201ENST00000583311 FOXI1Q12951 378 aa16.07■□□□□ 0.16
MIR3960-201ENST00000583311 PAPPA-AS1Q5QFB9 102 aa16.07■□□□□ 0.16
MIR3960-201ENST00000583311 OPRPNQ99935 248 aaPredicted RBP16.07■□□□□ 0.16
MIR3960-201ENST00000583311 FUSP35637 526 aaKnown RBP eCLIP16.06■□□□□ 0.16
MIR3960-201ENST00000583311 TEX43Q6ZNM6 134 aa16.06■□□□□ 0.16
MIR3960-201ENST00000583311 COLCA2A8K830 154 aa16.05■□□□□ 0.16
MIR3960-201ENST00000583311 LINC00614P0C842 121 aa16.05■□□□□ 0.16
MIR3960-201ENST00000583311 FAM104AQ969W3 186 aa16.05■□□□□ 0.16
MIR3960-201ENST00000583311 TIMM17AQ99595 171 aa16.05■□□□□ 0.16
MIR3960-201ENST00000583311 C2orf88Q9BSF0 95 aa16.05■□□□□ 0.16
MIR3960-201ENST00000583311 DYNC1H1Q14204 4646 aaKnown RBP16.04■□□□□ 0.16
MIR3960-201ENST00000583311 IGIPA6NJ69 53 aa16.04■□□□□ 0.16
MIR3960-201ENST00000583311 GCSHP23434 173 aa16.04■□□□□ 0.16
MIR3960-201ENST00000583311 VCX2Q9H322 139 aa16.04■□□□□ 0.16
MIR3960-201ENST00000583311 TRGC2P03986 189 aa16.03■□□□□ 0.16
MIR3960-201ENST00000583311 SCGB3A1Q96QR1 104 aa16.03■□□□□ 0.16
MIR3960-201ENST00000583311 ERASQ7Z444 233 aa16.02■□□□□ 0.16
MIR3960-201ENST00000583311 hDV102S1A0JD36 115 aa16.01■□□□□ 0.15
MIR3960-201ENST00000583311 SCO1O75880 301 aa16.01■□□□□ 0.15
MIR3960-201ENST00000583311 PRSS1P07477 247 aa16.01■□□□□ 0.15
MIR3960-201ENST00000583311 COX7A2LO14548 114 aa16■□□□□ 0.15
MIR3960-201ENST00000583311 AMELXQ99217 191 aa16■□□□□ 0.15
MIR3960-201ENST00000583311 DNAH5Q8TE73 4624 aa15.99■□□□□ 0.15
MIR3960-201ENST00000583311 IGHV1-58A0A0C4DH39 117 aa15.99■□□□□ 0.15
MIR3960-201ENST00000583311 S100A1P23297 94 aa15.99■□□□□ 0.15
MIR3960-201ENST00000583311 URB1-AS1Q96HZ7 61 aa15.99■□□□□ 0.15
MIR3960-201ENST00000583311 MALP21145 153 aa15.98■□□□□ 0.15
MIR3960-201ENST00000583311 C15orf56Q8N910 161 aa15.98■□□□□ 0.15
MIR3960-201ENST00000583311 CHCHD1Q96BP2 118 aaKnown RBP15.98■□□□□ 0.15
MIR3960-201ENST00000583311 HBDP02042 147 aa15.97■□□□□ 0.15
MIR3960-201ENST00000583311 GVQW2A0A096LPI5 108 aaPredicted RBP15.95■□□□□ 0.14
MIR3960-201ENST00000583311 APOMO95445 188 aa15.95■□□□□ 0.14
MIR3960-201ENST00000583311 UBE2D1P51668 147 aa15.95■□□□□ 0.14
MIR3960-201ENST00000583311 LINC00173Q6ZV60 143 aa15.95■□□□□ 0.14
MIR3960-201ENST00000583311 BAGE3Q86Y29 109 aa15.95■□□□□ 0.14
MIR3960-201ENST00000583311 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.94■□□□□ 0.14
MIR3960-201ENST00000583311 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.94■□□□□ 0.14
MIR3960-201ENST00000583311 KRTAP10-1P60331 282 aa15.94■□□□□ 0.14
MIR3960-201ENST00000583311 CNBPP62633 177 aaKnown RBP15.94■□□□□ 0.14
MIR3960-201ENST00000583311 SEC11AP67812 179 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms