RNA–Protein interactions for RNA: ENST00000583038.5

ERBB2-214, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 4,930 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-214ENST00000583038 SS18L2Q9UHA2 77 aa12.17□□□□□ -0.46
ERBB2-214ENST00000583038 TRBV30A0A0K0K1B3 111 aa12.17□□□□□ -0.46
ERBB2-214ENST00000583038 BPY2O14599 106 aa12.17□□□□□ -0.46
ERBB2-214ENST00000583038 IGKV2D-26A0A0A0MRZ7 120 aa12.16□□□□□ -0.46
ERBB2-214ENST00000583038 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
ERBB2-214ENST00000583038 TNRC6BQ9UPQ9 1833 aaKnown RBP12.16□□□□□ -0.46
ERBB2-214ENST00000583038 IGLV1-40P01703 118 aa12.15□□□□□ -0.46
ERBB2-214ENST00000583038 CRYGDP07320 174 aa12.15□□□□□ -0.46
ERBB2-214ENST00000583038 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
ERBB2-214ENST00000583038 MRGPRG-AS1Q2M3A8 158 aa12.15□□□□□ -0.46
ERBB2-214ENST00000583038 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
ERBB2-214ENST00000583038 NRACQ8N912 160 aa12.14□□□□□ -0.47
ERBB2-214ENST00000583038 CNFNQ9BYD5 112 aa12.14□□□□□ -0.47
ERBB2-214ENST00000583038 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
ERBB2-214ENST00000583038 HIGD2AQ9BW72 106 aa12.13□□□□□ -0.47
ERBB2-214ENST00000583038 KIAA1549Q9HCM3 1950 aa12.13□□□□□ -0.47
ERBB2-214ENST00000583038 NUP210LQ5VU65 1888 aa12.13□□□□□ -0.47
ERBB2-214ENST00000583038 IGKV2-24A0A0C4DH68 120 aa12.13□□□□□ -0.47
ERBB2-214ENST00000583038 MRPS36P82909 103 aaKnown RBP12.12□□□□□ -0.47
ERBB2-214ENST00000583038 C9orf85Q96MD7 179 aa12.12□□□□□ -0.47
ERBB2-214ENST00000583038 INAFM1C9JVW0 142 aa12.12□□□□□ -0.47
ERBB2-214ENST00000583038 MAPKAPK5-AS1Q8N8E1 139 aa12.12□□□□□ -0.47
ERBB2-214ENST00000583038 RBX1P62877 108 aa12.12□□□□□ -0.47
ERBB2-214ENST00000583038 C5orf47Q569G3 176 aa12.12□□□□□ -0.47
ERBB2-214ENST00000583038 ZNF843Q8N446 348 aa12.12□□□□□ -0.47
ERBB2-214ENST00000583038 LINC01006Q8NI28 216 aa12.12□□□□□ -0.47
ERBB2-214ENST00000583038 HCFC1P51610 2035 aa12.11□□□□□ -0.47
ERBB2-214ENST00000583038 H0Y9J4 135 aa12.11□□□□□ -0.47
ERBB2-214ENST00000583038 CD164L2Q6UWJ8 174 aa12.11□□□□□ -0.47
ERBB2-214ENST00000583038 C10orf99Q6UWK7 81 aa12.11□□□□□ -0.47
ERBB2-214ENST00000583038 TSHBP01222 138 aa12.11□□□□□ -0.47
ERBB2-214ENST00000583038 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
ERBB2-214ENST00000583038 MUC7Q8TAX7 377 aa12.11□□□□□ -0.47
ERBB2-214ENST00000583038 MUC22E2RYF6 1773 aaPredicted RBP12.1□□□□□ -0.47
ERBB2-214ENST00000583038 NDUFC2O95298 119 aa12.1□□□□□ -0.47
ERBB2-214ENST00000583038 UPK3BQ9BT76 320 aa12.1□□□□□ -0.47
ERBB2-214ENST00000583038 TRIAP1O43715 76 aa12.1□□□□□ -0.47
ERBB2-214ENST00000583038 FAM110AQ9BQ89 295 aa12.09□□□□□ -0.47
ERBB2-214ENST00000583038 Q8N976 141 aa12.09□□□□□ -0.47
ERBB2-214ENST00000583038 TRAV10A0A0B4J240 114 aa12.09□□□□□ -0.47
ERBB2-214ENST00000583038 C11orf21Q9P2W6 132 aa12.09□□□□□ -0.47
ERBB2-214ENST00000583038 DCANP1Q8TF63 244 aa12.08□□□□□ -0.47
ERBB2-214ENST00000583038 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
ERBB2-214ENST00000583038 RNF183Q96D59 192 aa12.07□□□□□ -0.48
ERBB2-214ENST00000583038 LINC00482Q8N8I6 264 aa12.07□□□□□ -0.48
ERBB2-214ENST00000583038 UQCRQO14949 82 aa12.06□□□□□ -0.48
ERBB2-214ENST00000583038 PRR9Q5T870 116 aa12.06□□□□□ -0.48
ERBB2-214ENST00000583038 LELP1Q5T871 98 aa12.06□□□□□ -0.48
ERBB2-214ENST00000583038 PROK1P58294 105 aa12.06□□□□□ -0.48
ERBB2-214ENST00000583038 C6orf99Q4VX62 202 aa12.06□□□□□ -0.48
ERBB2-214ENST00000583038 BBC3Q96PG8 261 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-214ENST00000583038 FAM19A1Q7Z5A9 133 aa12.05□□□□□ -0.48
ERBB2-214ENST00000583038 UBE2D4Q9Y2X8 147 aa12.05□□□□□ -0.48
ERBB2-214ENST00000583038 TRAV23DV6A0A075B6W5 121 aa12.05□□□□□ -0.48
ERBB2-214ENST00000583038 NDUFV3P56181 108 aaKnown RBP12.05□□□□□ -0.48
ERBB2-214ENST00000583038 CRIP2P52943 208 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-214ENST00000583038 XAGE1AQ9HD64 81 aa12.04□□□□□ -0.48
ERBB2-214ENST00000583038 CEP192Q8TEP8 1941 aa12.03□□□□□ -0.48
ERBB2-214ENST00000583038 A0A087WZ39 114 aa12.02□□□□□ -0.49
ERBB2-214ENST00000583038 BRI3O95415 125 aa12.02□□□□□ -0.49
ERBB2-214ENST00000583038 LY6G6DO95868 133 aa12.02□□□□□ -0.49
ERBB2-214ENST00000583038 C2orf91Q6ZV80 131 aa12.02□□□□□ -0.49
ERBB2-214ENST00000583038 LINC00959A0A1B0GUT2 108 aa12.02□□□□□ -0.49
ERBB2-214ENST00000583038 COX17Q14061 63 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 IMUPQ9GZP8 106 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 ZNF580Q9UK33 172 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 M0R378 163 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 LST1O00453 97 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 MRPS12O15235 138 aaKnown RBP12.01□□□□□ -0.49
ERBB2-214ENST00000583038 MT-ATP8P03928 68 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 UBE2D1P51668 147 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 TANC2Q9HCD6 1990 aa12.01□□□□□ -0.49
ERBB2-214ENST00000583038 USP9XQ93008 2570 aaPredicted RBP12.01□□□□□ -0.49
ERBB2-214ENST00000583038 UBE2D3P61077 147 aa12□□□□□ -0.49
ERBB2-214ENST00000583038 UBE2D2P62837 147 aa12□□□□□ -0.49
ERBB2-214ENST00000583038 KPRPQ5T749 579 aaPredicted RBP12□□□□□ -0.49
ERBB2-214ENST00000583038 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
ERBB2-214ENST00000583038 C20orf197Q8N268 126 aa12□□□□□ -0.49
ERBB2-214ENST00000583038 DHRS4-AS1Q9P1J3 65 aa12□□□□□ -0.49
ERBB2-214ENST00000583038 NDUFA7O95182 113 aa11.99□□□□□ -0.49
ERBB2-214ENST00000583038 PRRC2AP48634 2157 aaKnown RBP11.99□□□□□ -0.49
ERBB2-214ENST00000583038 SDIM1Q6ZPB5 146 aa11.99□□□□□ -0.49
ERBB2-214ENST00000583038 Q6ZS46 218 aa11.98□□□□□ -0.49
ERBB2-214ENST00000583038 SLPIP03973 132 aa11.98□□□□□ -0.49
ERBB2-214ENST00000583038 CCKP06307 115 aa11.98□□□□□ -0.49
ERBB2-214ENST00000583038 Q8IZM0 81 aa11.98□□□□□ -0.49
ERBB2-214ENST00000583038 ZFYVE26Q68DK2 2539 aa11.98□□□□□ -0.49
ERBB2-214ENST00000583038 IGKV4-1P06312 121 aa11.98□□□□□ -0.49
ERBB2-214ENST00000583038 ABCA12Q86UK0 2595 aa11.98□□□□□ -0.49
ERBB2-214ENST00000583038 IGIPA6NJ69 53 aa11.97□□□□□ -0.49
ERBB2-214ENST00000583038 SEC61GP60059 68 aa11.97□□□□□ -0.49
ERBB2-214ENST00000583038 COX8CQ7Z4L0 72 aa11.97□□□□□ -0.49
ERBB2-214ENST00000583038 CHCHD7Q9BUK0 85 aa11.97□□□□□ -0.49
ERBB2-214ENST00000583038 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.97□□□□□ -0.49
ERBB2-214ENST00000583038 CDC42SE2Q9NRR3 84 aa11.97□□□□□ -0.49
ERBB2-214ENST00000583038 TLN2Q9Y4G6 2542 aa11.97□□□□□ -0.49
ERBB2-214ENST00000583038 LRP4O75096 1905 aa11.97□□□□□ -0.49
ERBB2-214ENST00000583038 Q6ZQY7 126 aa11.96□□□□□ -0.49
ERBB2-214ENST00000583038 FAM19A5Q7Z5A7 132 aaPredicted RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms