RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 SPANXA1Q9NS26 97 aa6.44□□□□□ -1.38
RFFL-210ENST00000582308 KLK12Q9UKR0 248 aa6.44□□□□□ -1.38
RFFL-210ENST00000582308 IGLV4-3A0A075B6K6 122 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 NBDYA0A0U1RRE5 68 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 LCE6AA0A183 80 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
RFFL-210ENST00000582308 MRPS36P82909 103 aaKnown RBP6.43□□□□□ -1.38
RFFL-210ENST00000582308 SMAGPQ0VAQ4 97 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 RNASE13Q5GAN3 156 aaKnown RBP6.43□□□□□ -1.38
RFFL-210ENST00000582308 DGAT2L7PQ6IED9 249 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 Q6ZUT4 128 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 LINC00173Q6ZV60 143 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 ERASQ7Z444 233 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 LINC00269Q8N2A0 174 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 ZNF664Q8N3J9 261 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 TMEM101Q96IK0 257 aa6.43□□□□□ -1.38
RFFL-210ENST00000582308 TRAV9-2A0A087WT02 112 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 LINC01549A6NIU2 74 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 IBA57-AS1B1ANH7 110 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 M0R2N4 97 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 ZC2HC1BQ5TFG8 222 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 CLPSL2Q6UWE3 100 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 ENHOQ6UWT2 76 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 TIMM17AQ99595 171 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 PRR34Q9NV39 138 aa6.42□□□□□ -1.38
RFFL-210ENST00000582308 HYDINQ4G0P3 5121 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 K7EP13 123 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 S100A6P06703 90 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 NPSP0C0P6 89 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 Q6ZR54 194 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 C10orf126Q8N4M7 172 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 TMEM141Q96I45 108 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 AMELXQ99217 191 aa6.41□□□□□ -1.38
RFFL-210ENST00000582308 TMA7Q9Y2S6 64 aaKnown RBP6.41□□□□□ -1.38
RFFL-210ENST00000582308 C5orf52A6NGY3 159 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.4□□□□□ -1.38
RFFL-210ENST00000582308 ATP5LO75964 103 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 LEPROTL1O95214 131 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 FABP4P15090 132 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 SNRPEP62304 92 aaKnown RBP6.4□□□□□ -1.38
RFFL-210ENST00000582308 REG3AQ06141 175 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 TTC32Q5I0X7 151 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 HIST3H2BBQ8N257 126 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 BAALCQ8WXS3 180 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 UBE2WQ96B02 151 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 DNAH2Q9P225 4427 aa6.4□□□□□ -1.38
RFFL-210ENST00000582308 DNAH10Q8IVF4 4471 aa6.4□□□□□ -1.39
RFFL-210ENST00000582308 IGKV3OR2-268A0A0C4DH90 116 aa6.39□□□□□ -1.39
RFFL-210ENST00000582308 IFI27L1Q96BM0 104 aa6.39□□□□□ -1.39
RFFL-210ENST00000582308 PACRGQ96M98 296 aaPredicted RBP6.39□□□□□ -1.39
RFFL-210ENST00000582308 VCX2Q9H322 139 aa6.39□□□□□ -1.39
RFFL-210ENST00000582308 Q9HAA7 133 aa6.39□□□□□ -1.39
RFFL-210ENST00000582308 HSPB8Q9UJY1 196 aa6.39□□□□□ -1.39
RFFL-210ENST00000582308 TRAV8-3A0A0A6YYJ7 113 aa6.38□□□□□ -1.39
RFFL-210ENST00000582308 LINC00959A0A1B0GUT2 108 aa6.38□□□□□ -1.39
RFFL-210ENST00000582308 IFITM10A6NMD0 228 aa6.38□□□□□ -1.39
RFFL-210ENST00000582308 PAPPA-AS1Q5QFB9 102 aa6.38□□□□□ -1.39
RFFL-210ENST00000582308 Q6ZN92 141 aa6.38□□□□□ -1.39
RFFL-210ENST00000582308 TEX43Q6ZNM6 134 aa6.38□□□□□ -1.39
RFFL-210ENST00000582308 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
RFFL-210ENST00000582308 KMT2CQ8NEZ4 4911 aaKnown RBP6.37□□□□□ -1.39
RFFL-210ENST00000582308 FRAS1Q86XX4 4008 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 IGLV10-54A0A075B6I4 117 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 TRAV13-1A0A0B4J241 112 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 PRSS29PA6NIE9 313 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 CRPP02741 224 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 UBE2D1P51668 147 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 PMVKQ15126 192 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 MIAQ16674 131 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 KRTAP26-1Q6PEX3 210 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 HIST1H2BLQ99880 126 aa6.37□□□□□ -1.39
RFFL-210ENST00000582308 TRAV8-4A0A0B4J246 113 aa6.36□□□□□ -1.39
RFFL-210ENST00000582308 PRSS1P07477 247 aa6.36□□□□□ -1.39
RFFL-210ENST00000582308 S100A2P29034 98 aa6.36□□□□□ -1.39
RFFL-210ENST00000582308 SS18Q15532 418 aa6.36□□□□□ -1.39
RFFL-210ENST00000582308 C2orf88Q9BSF0 95 aa6.36□□□□□ -1.39
RFFL-210ENST00000582308 DNAH17Q9UFH2 4485 aa6.36□□□□□ -1.39
RFFL-210ENST00000582308 IGKV2D-24A0A075B6R9 120 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 CCL25O15444 150 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 XCL1P47992 114 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 COX6A2Q02221 97 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 LINC00242Q5T6M2 205 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 Q6ZRN7 208 aaPredicted RBP6.35□□□□□ -1.39
RFFL-210ENST00000582308 C6orf223Q8N319 242 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 MAPKAPK5-AS1Q8N8E1 139 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 CHCHD10Q8WYQ3 142 aaPredicted RBP6.35□□□□□ -1.39
RFFL-210ENST00000582308 C1orf43Q9BWL3 253 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 MAP1LC3CQ9BXW4 147 aa6.35□□□□□ -1.39
RFFL-210ENST00000582308 TRAV12-1A0A0B4J245 112 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 GAGE12HA6NDE8 117 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 H0Y8G0 127 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 SYS1-DBNDD2H3BUS1 97 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 C3orf79P0CE67 100 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 FOXI1Q12951 378 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 ODF1Q14990 250 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 C1orf134Q5TEV5 83 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 FAM19A3Q7Z5A8 133 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 SPATA12Q7Z6I5 190 aa6.34□□□□□ -1.39
RFFL-210ENST00000582308 NFE4Q86UQ8 179 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms