RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SPANXA1Q9NS26 97 aa13.38□□□□□ -0.27
TOP3A-213ENST00000582230 LINC01546A6NGU7 62 aa13.37□□□□□ -0.27
TOP3A-213ENST00000582230 RPL39P62891 51 aaKnown RBP13.37□□□□□ -0.27
TOP3A-213ENST00000582230 ZNF664Q8N3J9 261 aa13.37□□□□□ -0.27
TOP3A-213ENST00000582230 ATP6V1G1O75348 118 aa13.36□□□□□ -0.27
TOP3A-213ENST00000582230 FA2HQ7L5A8 372 aa13.36□□□□□ -0.27
TOP3A-213ENST00000582230 C18orf32Q8TCD1 76 aa13.36□□□□□ -0.27
TOP3A-213ENST00000582230 CYSLTR1Q9Y271 337 aa13.36□□□□□ -0.27
TOP3A-213ENST00000582230 TRGC2P03986 189 aa13.35□□□□□ -0.27
TOP3A-213ENST00000582230 EREGO14944 169 aa13.34□□□□□ -0.27
TOP3A-213ENST00000582230 C2orf66Q6UXQ4 117 aa13.34□□□□□ -0.27
TOP3A-213ENST00000582230 PYGO1Q9Y3Y4 419 aa13.34□□□□□ -0.27
TOP3A-213ENST00000582230 RAB5BP61020 215 aa13.33□□□□□ -0.28
TOP3A-213ENST00000582230 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.28
TOP3A-213ENST00000582230 A0A087WTM6 91 aa13.32□□□□□ -0.28
TOP3A-213ENST00000582230 IGKV3OR2-268A0A0C4DH90 116 aa13.32□□□□□ -0.28
TOP3A-213ENST00000582230 LINC01549A6NIU2 74 aa13.32□□□□□ -0.28
TOP3A-213ENST00000582230 LINC00614P0C842 121 aa13.32□□□□□ -0.28
TOP3A-213ENST00000582230 AP5S1Q9NUS5 200 aa13.32□□□□□ -0.28
TOP3A-213ENST00000582230 IGLV10-54A0A075B6I4 117 aa13.31□□□□□ -0.28
TOP3A-213ENST00000582230 A0A1B0GVY2 172 aa13.31□□□□□ -0.28
TOP3A-213ENST00000582230 NPSP0C0P6 89 aa13.31□□□□□ -0.28
TOP3A-213ENST00000582230 LINC00959A0A1B0GUT2 108 aa13.3□□□□□ -0.28
TOP3A-213ENST00000582230 LRCOL1A6NCL2 159 aa13.3□□□□□ -0.28
TOP3A-213ENST00000582230 KRTAP26-1Q6PEX3 210 aa13.3□□□□□ -0.28
TOP3A-213ENST00000582230 Q6ZUT4 128 aa13.3□□□□□ -0.28
TOP3A-213ENST00000582230 MAPKAPK5-AS1Q8N8E1 139 aa13.3□□□□□ -0.28
TOP3A-213ENST00000582230 TOMM6Q96B49 74 aa13.3□□□□□ -0.28
TOP3A-213ENST00000582230 CCL25O15444 150 aa13.29□□□□□ -0.28
TOP3A-213ENST00000582230 SS18Q15532 418 aa13.29□□□□□ -0.28
TOP3A-213ENST00000582230 RNASE13Q5GAN3 156 aaKnown RBP13.28□□□□□ -0.28
TOP3A-213ENST00000582230 BAALCQ8WXS3 180 aa13.28□□□□□ -0.28
TOP3A-213ENST00000582230 CHCHD10Q8WYQ3 142 aaPredicted RBP13.28□□□□□ -0.28
TOP3A-213ENST00000582230 FAM104AQ969W3 186 aa13.28□□□□□ -0.28
TOP3A-213ENST00000582230 IGIPA6NJ69 53 aa13.27□□□□□ -0.29
TOP3A-213ENST00000582230 URB1-AS1Q96HZ7 61 aa13.27□□□□□ -0.29
TOP3A-213ENST00000582230 TMEM141Q96I45 108 aa13.27□□□□□ -0.29
TOP3A-213ENST00000582230 OPRPNQ99935 248 aaPredicted RBP13.27□□□□□ -0.29
TOP3A-213ENST00000582230 IGLV4-3A0A075B6K6 122 aa13.26□□□□□ -0.29
TOP3A-213ENST00000582230 C1orf196B1AJZ1 125 aa13.26□□□□□ -0.29
TOP3A-213ENST00000582230 PAPPA-AS1Q5QFB9 102 aa13.26□□□□□ -0.29
TOP3A-213ENST00000582230 Q6ZN92 141 aa13.26□□□□□ -0.29
TOP3A-213ENST00000582230 ERASQ7Z444 233 aa13.26□□□□□ -0.29
TOP3A-213ENST00000582230 CHCHD1Q96BP2 118 aaKnown RBP13.26□□□□□ -0.29
TOP3A-213ENST00000582230 TIMM17AQ99595 171 aa13.26□□□□□ -0.29
TOP3A-213ENST00000582230 DNAH2Q9P225 4427 aa13.25□□□□□ -0.29
TOP3A-213ENST00000582230 SCGB3A1Q96QR1 104 aa13.25□□□□□ -0.29
TOP3A-213ENST00000582230 TRAV13-1A0A0B4J241 112 aa13.24□□□□□ -0.29
TOP3A-213ENST00000582230 GAGE12HA6NDE8 117 aa13.24□□□□□ -0.29
TOP3A-213ENST00000582230 TEX43Q6ZNM6 134 aa13.24□□□□□ -0.29
TOP3A-213ENST00000582230 BAGE3Q86Y29 109 aa13.24□□□□□ -0.29
TOP3A-213ENST00000582230 LECT2O14960 151 aa13.23□□□□□ -0.29
TOP3A-213ENST00000582230 XCL1P47992 114 aa13.23□□□□□ -0.29
TOP3A-213ENST00000582230 C14orf177Q52M58 125 aa13.23□□□□□ -0.29
TOP3A-213ENST00000582230 CD164L2Q6UWJ8 174 aa13.23□□□□□ -0.29
TOP3A-213ENST00000582230 Q8N814 137 aa13.23□□□□□ -0.29
TOP3A-213ENST00000582230 VCX2Q9H322 139 aa13.23□□□□□ -0.29
TOP3A-213ENST00000582230 PGPEP1Q9NXJ5 209 aa13.23□□□□□ -0.29
TOP3A-213ENST00000582230 IFITM10A6NMD0 228 aa13.22□□□□□ -0.29
TOP3A-213ENST00000582230 HBDP02042 147 aa13.22□□□□□ -0.29
TOP3A-213ENST00000582230 WFDC2Q14508 124 aa13.22□□□□□ -0.29
TOP3A-213ENST00000582230 SPATA12Q7Z6I5 190 aa13.22□□□□□ -0.29
TOP3A-213ENST00000582230 C2orf88Q9BSF0 95 aa13.22□□□□□ -0.29
TOP3A-213ENST00000582230 USP17L23D6RBM5 183 aa13.21□□□□□ -0.29
TOP3A-213ENST00000582230 FOXI1Q12951 378 aa13.21□□□□□ -0.29
TOP3A-213ENST00000582230 AMELXQ99217 191 aa13.21□□□□□ -0.29
TOP3A-213ENST00000582230 DNAH10Q8IVF4 4471 aa13.21□□□□□ -0.3
TOP3A-213ENST00000582230 A0A096LNJ9 63 aa13.2□□□□□ -0.3
TOP3A-213ENST00000582230 CDPF1Q6NVV7 123 aa13.2□□□□□ -0.3
TOP3A-213ENST00000582230 NTN5Q8WTR8 489 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-213ENST00000582230 FRAS1Q86XX4 4008 aa13.2□□□□□ -0.3
TOP3A-213ENST00000582230 KRTAP10-2P60368 255 aa13.19□□□□□ -0.3
TOP3A-213ENST00000582230 CFAP161Q6P656 301 aa13.19□□□□□ -0.3
TOP3A-213ENST00000582230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-213ENST00000582230 HSBP1O75506 76 aa13.18□□□□□ -0.3
TOP3A-213ENST00000582230 PMCHL1Q16048 86 aa13.18□□□□□ -0.3
TOP3A-213ENST00000582230 LINC00173Q6ZV60 143 aa13.18□□□□□ -0.3
TOP3A-213ENST00000582230 PDZD11Q5EBL8 140 aa13.17□□□□□ -0.3
TOP3A-213ENST00000582230 DNAH17Q9UFH2 4485 aa13.17□□□□□ -0.3
TOP3A-213ENST00000582230 UBE2D1P51668 147 aa13.16□□□□□ -0.3
TOP3A-213ENST00000582230 BIRC6Q9NR09 4857 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 COX7A2LO14548 114 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 SERF1AO75920 110 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 ATP5LO75964 103 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-213ENST00000582230 ZC2HC1BQ5TFG8 222 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 KRTAP17-1Q9BYP8 105 aa13.15□□□□□ -0.3
TOP3A-213ENST00000582230 FAT2Q9NYQ8 4349 aa13.14□□□□□ -0.31
TOP3A-213ENST00000582230 C16orf90A8MZG2 172 aa13.14□□□□□ -0.31
TOP3A-213ENST00000582230 SEC11AP67812 179 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms