RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
TOP3A-212ENST00000582122 LRCOL1A6NCL2 159 aa6.93□□□□□ -1.3
TOP3A-212ENST00000582122 NPYP01303 97 aa6.93□□□□□ -1.3
TOP3A-212ENST00000582122 Q8N814 137 aa6.93□□□□□ -1.3
TOP3A-212ENST00000582122 NXT2Q9NPJ8 142 aaKnown RBP6.93□□□□□ -1.3
TOP3A-212ENST00000582122 DNAH17Q9UFH2 4485 aa6.93□□□□□ -1.3
TOP3A-212ENST00000582122 IGLV4-60A0A075B6I1 120 aa6.92□□□□□ -1.3
TOP3A-212ENST00000582122 SPANXA1Q9NS26 97 aa6.92□□□□□ -1.3
TOP3A-212ENST00000582122 LINC01549A6NIU2 74 aa6.91□□□□□ -1.3
TOP3A-212ENST00000582122 ORMDL2Q53FV1 153 aa6.91□□□□□ -1.3
TOP3A-212ENST00000582122 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
TOP3A-212ENST00000582122 DEFB104AQ8WTQ1 72 aa6.91□□□□□ -1.3
TOP3A-212ENST00000582122 HSPG2P98160 4391 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 IGLV5-52A0A0A0MRZ9 124 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 SS18Q15532 418 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 ZNF664Q8N3J9 261 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 Q8N8P6 123 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 BAALCQ8WXS3 180 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 CDC42SE2Q9NRR3 84 aa6.9□□□□□ -1.3
TOP3A-212ENST00000582122 NPSP0C0P6 89 aa6.89□□□□□ -1.31
TOP3A-212ENST00000582122 KRTAP10-2P60368 255 aa6.89□□□□□ -1.31
TOP3A-212ENST00000582122 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
TOP3A-212ENST00000582122 C1orf196B1AJZ1 125 aa6.88□□□□□ -1.31
TOP3A-212ENST00000582122 CDK2AP2O75956 126 aa6.88□□□□□ -1.31
TOP3A-212ENST00000582122 GCSHP23434 173 aa6.88□□□□□ -1.31
TOP3A-212ENST00000582122 IFI27P40305 119 aaPredicted RBP6.88□□□□□ -1.31
TOP3A-212ENST00000582122 MRPS36P82909 103 aaKnown RBP6.88□□□□□ -1.31
TOP3A-212ENST00000582122 FABP9Q0Z7S8 132 aa6.88□□□□□ -1.31
TOP3A-212ENST00000582122 MAPKAPK5-AS1Q8N8E1 139 aa6.88□□□□□ -1.31
TOP3A-212ENST00000582122 CYSLTR1Q9Y271 337 aa6.88□□□□□ -1.31
TOP3A-212ENST00000582122 PYGO1Q9Y3Y4 419 aa6.88□□□□□ -1.31
TOP3A-212ENST00000582122 IGLV10-54A0A075B6I4 117 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 LINC00959A0A1B0GUT2 108 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 PAPPA-AS1Q5QFB9 102 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 KRTAP26-1Q6PEX3 210 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 PRSS3P2Q8NHM4 247 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 CHCHD10Q8WYQ3 142 aaPredicted RBP6.87□□□□□ -1.31
TOP3A-212ENST00000582122 KRTAP4-5Q9BYR2 181 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 MRPL18Q9H0U6 180 aaKnown RBP6.87□□□□□ -1.31
TOP3A-212ENST00000582122 SMCO4Q9NRQ5 59 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 TRAPPC1Q9Y5R8 145 aa6.87□□□□□ -1.31
TOP3A-212ENST00000582122 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
TOP3A-212ENST00000582122 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
TOP3A-212ENST00000582122 LECT2O14960 151 aa6.86□□□□□ -1.31
TOP3A-212ENST00000582122 CD164L2Q6UWJ8 174 aa6.86□□□□□ -1.31
TOP3A-212ENST00000582122 Q6ZN92 141 aa6.86□□□□□ -1.31
TOP3A-212ENST00000582122 ALKBH7Q9BT30 221 aaPredicted RBP6.86□□□□□ -1.31
TOP3A-212ENST00000582122 AP5S1Q9NUS5 200 aa6.86□□□□□ -1.31
TOP3A-212ENST00000582122 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.85□□□□□ -1.31
TOP3A-212ENST00000582122 TGIF2-C20orf24A0A0A6YYL0 155 aa6.85□□□□□ -1.31
TOP3A-212ENST00000582122 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
TOP3A-212ENST00000582122 KIAA1644Q3SXP7 199 aa6.85□□□□□ -1.31
TOP3A-212ENST00000582122 SLC7A5P1Q8MH63 180 aa6.85□□□□□ -1.31
TOP3A-212ENST00000582122 LRP1BQ9NZR2 4599 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 RAB5BP61020 215 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
TOP3A-212ENST00000582122 WFDC2Q14508 124 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 C2orf66Q6UXQ4 117 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 FA2HQ7L5A8 372 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 TMEM141Q96I45 108 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 C2orf88Q9BSF0 95 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 PKIGQ9Y2B9 76 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 PKD1P98161 4303 aa6.84□□□□□ -1.31
TOP3A-212ENST00000582122 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
TOP3A-212ENST00000582122 IGHV1-58A0A0C4DH39 117 aa6.83□□□□□ -1.32
TOP3A-212ENST00000582122 hDV102S1A0JD36 115 aa6.83□□□□□ -1.32
TOP3A-212ENST00000582122 LINC01546A6NGU7 62 aa6.83□□□□□ -1.32
TOP3A-212ENST00000582122 APOMO95445 188 aa6.83□□□□□ -1.32
TOP3A-212ENST00000582122 XCL1P47992 114 aa6.83□□□□□ -1.32
TOP3A-212ENST00000582122 FOXI1Q12951 378 aa6.83□□□□□ -1.32
TOP3A-212ENST00000582122 Q6ZUT4 128 aa6.83□□□□□ -1.32
TOP3A-212ENST00000582122 TRAV13-1A0A0B4J241 112 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 IFITM10A6NMD0 228 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 COX7A2LO14548 114 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 MALP21145 153 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 CNBPP62633 177 aaKnown RBP6.82□□□□□ -1.32
TOP3A-212ENST00000582122 SEC11AP67812 179 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 TEX43Q6ZNM6 134 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 TOMM6Q96B49 74 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 TIMM17AQ99595 171 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 VCX2Q9H322 139 aa6.82□□□□□ -1.32
TOP3A-212ENST00000582122 IGLV4-3A0A075B6K6 122 aa6.81□□□□□ -1.32
TOP3A-212ENST00000582122 GVQW2A0A096LPI5 108 aaPredicted RBP6.81□□□□□ -1.32
TOP3A-212ENST00000582122 PRSS1P07477 247 aa6.81□□□□□ -1.32
TOP3A-212ENST00000582122 ERASQ7Z444 233 aa6.81□□□□□ -1.32
TOP3A-212ENST00000582122 YPEL4Q96NS1 127 aa6.81□□□□□ -1.32
TOP3A-212ENST00000582122 F8WDY8 70 aa6.8□□□□□ -1.32
TOP3A-212ENST00000582122 LINC00614P0C842 121 aa6.8□□□□□ -1.32
TOP3A-212ENST00000582122 KRTAP10-1P60331 282 aa6.8□□□□□ -1.32
TOP3A-212ENST00000582122 HERC1Q15751 4861 aa6.8□□□□□ -1.32
TOP3A-212ENST00000582122 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
TOP3A-212ENST00000582122 DMBT1Q9UGM3 2413 aaPredicted RBP6.79□□□□□ -1.32
TOP3A-212ENST00000582122 IGIPA6NJ69 53 aa6.79□□□□□ -1.32
TOP3A-212ENST00000582122 ZNF561-AS1K7EIQ3 104 aa6.79□□□□□ -1.32
TOP3A-212ENST00000582122 RNASE13Q5GAN3 156 aaKnown RBP6.79□□□□□ -1.32
TOP3A-212ENST00000582122 CBLN2Q8IUK8 224 aa6.79□□□□□ -1.32
TOP3A-212ENST00000582122 Q8N1X5 172 aa6.79□□□□□ -1.32
TOP3A-212ENST00000582122 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms