RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TRBV27A0A0K0K1C4 114 aa13.72□□□□□ -0.21
CCDC42-203ENST00000581598 C18orf32Q8TCD1 76 aa13.72□□□□□ -0.21
CCDC42-203ENST00000581598 SMIM2Q9BVW6 85 aa13.72□□□□□ -0.21
CCDC42-203ENST00000581598 MAP1LC3AQ9H492 121 aa13.72□□□□□ -0.21
CCDC42-203ENST00000581598 SRRM2Q9UQ35 2752 aaKnown RBP13.71□□□□□ -0.21
CCDC42-203ENST00000581598 TMEM262E9PQX1 116 aa13.71□□□□□ -0.21
CCDC42-203ENST00000581598 C1orf196B1AJZ1 125 aa13.7□□□□□ -0.22
CCDC42-203ENST00000581598 ENHOQ6UWT2 76 aa13.7□□□□□ -0.22
CCDC42-203ENST00000581598 C1orf43Q9BWL3 253 aa13.7□□□□□ -0.22
CCDC42-203ENST00000581598 VCYO14598 125 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BKO60814 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BJP06899 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BOP23527 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BBP33778 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BDP58876 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BCP62807 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST2H2BEQ16778 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 MPV17L2Q567V2 206 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BHQ93079 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BNQ99877 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 HIST1H2BMQ99879 126 aa13.69□□□□□ -0.22
CCDC42-203ENST00000581598 CRPP02741 224 aa13.68□□□□□ -0.22
CCDC42-203ENST00000581598 IQCJQ1A5X6 159 aa13.68□□□□□ -0.22
CCDC42-203ENST00000581598 C14orf177Q52M58 125 aa13.68□□□□□ -0.22
CCDC42-203ENST00000581598 NTM-AS1Q6ZSK4 140 aa13.68□□□□□ -0.22
CCDC42-203ENST00000581598 Q8N8P6 123 aa13.68□□□□□ -0.22
CCDC42-203ENST00000581598 NXT2Q9NPJ8 142 aaKnown RBP13.68□□□□□ -0.22
CCDC42-203ENST00000581598 I3L3M4 83 aa13.67□□□□□ -0.22
CCDC42-203ENST00000581598 PMCHP20382 165 aa13.67□□□□□ -0.22
CCDC42-203ENST00000581598 CHCHD5Q9BSY4 110 aa13.67□□□□□ -0.22
CCDC42-203ENST00000581598 LOC389332A0A1B0GUA5 103 aa13.66□□□□□ -0.22
CCDC42-203ENST00000581598 LINC01546A6NGU7 62 aa13.66□□□□□ -0.22
CCDC42-203ENST00000581598 ANGP03950 147 aaKnown RBP13.66□□□□□ -0.22
CCDC42-203ENST00000581598 PLA2G1BP04054 148 aaKnown RBP13.66□□□□□ -0.22
CCDC42-203ENST00000581598 IFI27P40305 119 aaPredicted RBP13.66□□□□□ -0.22
CCDC42-203ENST00000581598 MIAQ16674 131 aa13.66□□□□□ -0.22
CCDC42-203ENST00000581598 TSHBP01222 138 aa13.65□□□□□ -0.22
CCDC42-203ENST00000581598 URB1-AS1Q96HZ7 61 aa13.65□□□□□ -0.22
CCDC42-203ENST00000581598 PRR34Q9NV39 138 aa13.65□□□□□ -0.22
CCDC42-203ENST00000581598 TRBV25-1A0A075B6N4 114 aa13.64□□□□□ -0.23
CCDC42-203ENST00000581598 COTL1Q14019 142 aa13.64□□□□□ -0.23
CCDC42-203ENST00000581598 LINC01620Q4KN68 170 aa13.64□□□□□ -0.23
CCDC42-203ENST00000581598 LINC00528Q8N1L1 170 aa13.64□□□□□ -0.23
CCDC42-203ENST00000581598 KIR2DL4Q99706 377 aa13.64□□□□□ -0.23
CCDC42-203ENST00000581598 K7EMI3 77 aa13.63□□□□□ -0.23
CCDC42-203ENST00000581598 TCAPO15273 167 aa13.63□□□□□ -0.23
CCDC42-203ENST00000581598 RAB5BP61020 215 aa13.63□□□□□ -0.23
CCDC42-203ENST00000581598 SCXQ7RTU7 201 aa13.63□□□□□ -0.23
CCDC42-203ENST00000581598 PRSS3P2Q8NHM4 247 aa13.63□□□□□ -0.23
CCDC42-203ENST00000581598 CHAC1Q9BUX1 264 aa13.63□□□□□ -0.23
CCDC42-203ENST00000581598 RBX1P62877 108 aa13.62□□□□□ -0.23
CCDC42-203ENST00000581598 FA2HQ7L5A8 372 aa13.61□□□□□ -0.23
CCDC42-203ENST00000581598 IGHV1-24A0A0C4DH33 117 aa13.6□□□□□ -0.23
CCDC42-203ENST00000581598 LINC00614P0C842 121 aa13.6□□□□□ -0.23
CCDC42-203ENST00000581598 LINC00310P59036 64 aa13.6□□□□□ -0.23
CCDC42-203ENST00000581598 COA6Q5JTJ3 125 aaKnown RBP13.6□□□□□ -0.23
CCDC42-203ENST00000581598 BAGE3Q86Y29 109 aa13.6□□□□□ -0.23
CCDC42-203ENST00000581598 USP17L23D6RBM5 183 aa13.59□□□□□ -0.23
CCDC42-203ENST00000581598 ESDP10768 282 aa13.59□□□□□ -0.23
CCDC42-203ENST00000581598 FCER1GP30273 86 aa13.59□□□□□ -0.23
CCDC42-203ENST00000581598 GAGE6Q13070 117 aa13.59□□□□□ -0.23
CCDC42-203ENST00000581598 KRTAP26-1Q6PEX3 210 aa13.59□□□□□ -0.23
CCDC42-203ENST00000581598 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
CCDC42-203ENST00000581598 CHCHD1Q96BP2 118 aaKnown RBP13.59□□□□□ -0.23
CCDC42-203ENST00000581598 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
CCDC42-203ENST00000581598 SERF1AO75920 110 aa13.58□□□□□ -0.24
CCDC42-203ENST00000581598 CIRBP-AS1Q8TBR5 109 aa13.58□□□□□ -0.24
CCDC42-203ENST00000581598 AMTP48728 403 aa13.57□□□□□ -0.24
CCDC42-203ENST00000581598 ORMDL2Q53FV1 153 aa13.57□□□□□ -0.24
CCDC42-203ENST00000581598 DGAT2L7PQ6IED9 249 aa13.57□□□□□ -0.24
CCDC42-203ENST00000581598 RNASEKQ6P5S7 137 aaKnown RBP13.57□□□□□ -0.24
CCDC42-203ENST00000581598 LINC00269Q8N2A0 174 aa13.57□□□□□ -0.24
CCDC42-203ENST00000581598 A0A1B0GUV1 79 aa13.56□□□□□ -0.24
CCDC42-203ENST00000581598 TMEM243Q9BU79 118 aa13.56□□□□□ -0.24
CCDC42-203ENST00000581598 C20orf203Q8NBC4 194 aa13.55□□□□□ -0.24
CCDC42-203ENST00000581598 NUPR1O60356 82 aa13.54□□□□□ -0.24
CCDC42-203ENST00000581598 PRSS1P07477 247 aa13.54□□□□□ -0.24
CCDC42-203ENST00000581598 NDUFA6P56556 154 aa13.54□□□□□ -0.24
CCDC42-203ENST00000581598 REG3AQ06141 175 aa13.54□□□□□ -0.24
CCDC42-203ENST00000581598 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
CCDC42-203ENST00000581598 TRAV8-4A0A0B4J246 113 aa13.53□□□□□ -0.24
CCDC42-203ENST00000581598 KRTAP29-1A8MX34 341 aaPredicted RBP13.53□□□□□ -0.24
CCDC42-203ENST00000581598 KRTAP10-4P60372 401 aaPredicted RBP13.53□□□□□ -0.24
CCDC42-203ENST00000581598 C9orf163Q8N9P6 203 aa13.53□□□□□ -0.24
CCDC42-203ENST00000581598 A0A096LNJ9 63 aa13.52□□□□□ -0.25
CCDC42-203ENST00000581598 H7C423 109 aa13.52□□□□□ -0.25
CCDC42-203ENST00000581598 J3QL48 77 aa13.52□□□□□ -0.25
CCDC42-203ENST00000581598 HSBP1O75506 76 aa13.51□□□□□ -0.25
CCDC42-203ENST00000581598 G0S2P27469 103 aa13.51□□□□□ -0.25
CCDC42-203ENST00000581598 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.5□□□□□ -0.25
CCDC42-203ENST00000581598 IGKV2-29A2NJV5 120 aaPredicted RBP13.5□□□□□ -0.25
CCDC42-203ENST00000581598 C2orf66Q6UXQ4 117 aa13.5□□□□□ -0.25
CCDC42-203ENST00000581598 TMEM18Q96B42 140 aa13.5□□□□□ -0.25
CCDC42-203ENST00000581598 CYSLTR1Q9Y271 337 aa13.5□□□□□ -0.25
CCDC42-203ENST00000581598 IGLV4-60A0A075B6I1 120 aa13.49□□□□□ -0.25
CCDC42-203ENST00000581598 HBDP02042 147 aa13.49□□□□□ -0.25
CCDC42-203ENST00000581598 RPL39P62891 51 aaKnown RBP13.49□□□□□ -0.25
CCDC42-203ENST00000581598 MRPL52Q86TS9 123 aaKnown RBP13.49□□□□□ -0.25
CCDC42-203ENST00000581598 TOMM6Q96B49 74 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms