RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 A0A096LNJ9 63 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 TRBV6-5A0A0K0K1A5 114 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 GIG44P09565 113 aaPredicted RBP2.49□□□□□ -2.01
SMG8-205ENST00000580798 HMGA1P17096 107 aaKnown RBP2.49□□□□□ -2.01
SMG8-205ENST00000580798 CAV3P56539 151 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 KPRPQ5T749 579 aaPredicted RBP2.49□□□□□ -2.01
SMG8-205ENST00000580798 GDF5OSQ5U4N7 250 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 CSAG1Q6PB30 78 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 ST20-AS1Q8NBB2 130 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 CYYR1Q96J86 154 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 LINC00167Q96N53 147 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 KIF25-AS1Q9Y6Z4 181 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 CD163L1Q9NR16 1453 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 LRP5O75197 1615 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 BTAF1O14981 1849 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 MICAL3Q7RTP6 2002 aa2.49□□□□□ -2.01
SMG8-205ENST00000580798 SNRNP200O75643 2136 aaKnown RBP2.48□□□□□ -2.01
SMG8-205ENST00000580798 ANKRD12Q6UB98 2062 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 PLXNA3P51805 1871 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 TRPM7Q96QT4 1865 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 IGKV3D-7A0A0C4DH55 119 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 TRBV7-4A0A0J9YYF1 115 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 A0A1W2PNM2 257 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 FAM168BA1KXE4 195 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 F8VRH5 84 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 CISD3P0C7P0 127 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 PLNP26678 52 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 UBL5Q9BZL1 73 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 LHFPL6Q9Y693 200 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 TANC1Q9C0D5 1861 aa2.48□□□□□ -2.01
SMG8-205ENST00000580798 ARHGAP21Q5T5U3 1957 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 CASP8AP2Q9UKL3 1982 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 PTPRDP23468 1912 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 IGLV2-18A0A075B6J9 118 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 SMIM27A0A1W2PRY6 76 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 NUPR2A6NF83 97 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 Q5W150 140 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 TYMSOSQ8TAI1 123 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 Q9BRP9 147 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 ADGRB2O60241 1585 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 MROH2BQ7Z745 1585 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 MGAMO43451 1857 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 PLCH1Q4KWH8 1693 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 NHSQ6T4R5 1651 aa2.47□□□□□ -2.01
SMG8-205ENST00000580798 PIKFYVEQ9Y2I7 2098 aa2.46□□□□□ -2.01
SMG8-205ENST00000580798 LOC285556D6RIA3 1793 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 POLR1AO95602 1720 aaPredicted RBP2.46□□□□□ -2.02
SMG8-205ENST00000580798 LTBP1Q14766 1721 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 ERCC6L2Q5T890 1561 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 ARID1AO14497 2285 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 A0A087WVE0 104 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 CTXND1A0A1B0GTU2 59 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 KIAA2026Q5HYC2 2103 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 SLX4Q8IY92 1834 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 PAPPAQ13219 1627 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 ALKQ9UM73 1620 aa2.46□□□□□ -2.02
SMG8-205ENST00000580798 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.45□□□□□ -2.02
SMG8-205ENST00000580798 BRWD3Q6RI45 1802 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 COL4A6Q14031 1691 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 M0R3E3 92 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 UQCR11O14957 56 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 MGPP08493 103 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 P0C880 135 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 NREPQ16612 68 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 KRTAP11-1Q8IUC1 163 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 COX7B2Q8TF08 81 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 KLK12Q9UKR0 248 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 V9GYV3 84 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 MED12LQ86YW9 2145 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 UBR1Q8IWV7 1749 aa2.45□□□□□ -2.02
SMG8-205ENST00000580798 FAM208AQ9UK61 1670 aaKnown RBP2.44□□□□□ -2.02
SMG8-205ENST00000580798 ATRXP46100 2492 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 IGLV4-69A0A075B6H9 119 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 C10orf142B7Z368 130 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 WISP3O95389 354 aaPredicted RBP2.44□□□□□ -2.02
SMG8-205ENST00000580798 CNBPP62633 177 aaKnown RBP2.44□□□□□ -2.02
SMG8-205ENST00000580798 PDE6HQ13956 83 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 KRTAP25-1Q3LHN0 102 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 SPINT4Q6UDR6 99 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 FDCSPQ8NFU4 85 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 LINC01558Q9Y6Z2 57 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 NUP188Q5SRE5 1749 aa2.44□□□□□ -2.02
SMG8-205ENST00000580798 TET2Q6N021 2002 aaPredicted RBP2.44□□□□□ -2.02
SMG8-205ENST00000580798 PLXNA2O75051 1894 aa2.43□□□□□ -2.02
SMG8-205ENST00000580798 TJP1Q07157 1748 aa2.43□□□□□ -2.02
SMG8-205ENST00000580798 NUMA1Q14980 2115 aa2.43□□□□□ -2.02
SMG8-205ENST00000580798 TMEM263Q8WUH6 116 aaKnown RBP2.43□□□□□ -2.02
SMG8-205ENST00000580798 LINC00846Q9NV44 126 aa2.43□□□□□ -2.02
SMG8-205ENST00000580798 PSORS1C2Q9UIG4 136 aa2.43□□□□□ -2.02
SMG8-205ENST00000580798 LAMB2P55268 1798 aa2.43□□□□□ -2.02
SMG8-205ENST00000580798 MYO9BQ13459 2157 aa2.43□□□□□ -2.02
SMG8-205ENST00000580798 TSC2P49815 1807 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 LCTP09848 1927 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 GON4LQ3T8J9 2241 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 ANKRD36CQ5JPF3 1778 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 C3P01024 1663 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 ABCC8Q09428 1581 aa2.42□□□□□ -2.02
SMG8-205ENST00000580798 CLPSL1A2RUU4 121 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms