RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 CXCL1P09341 107 aa7.8□□□□□ -1.16
CSNK1D-213ENST00000580446 ZNF25P17030 456 aaPredicted RBP7.8□□□□□ -1.16
CSNK1D-213ENST00000580446 CDC42SE2Q9NRR3 84 aa7.8□□□□□ -1.16
CSNK1D-213ENST00000580446 G3V3Q6 166 aa7.79□□□□□ -1.16
CSNK1D-213ENST00000580446 NUPR1O60356 82 aa7.79□□□□□ -1.16
CSNK1D-213ENST00000580446 GATD1Q8NB37 220 aa7.79□□□□□ -1.16
CSNK1D-213ENST00000580446 ORAOV1Q8WV07 137 aa7.79□□□□□ -1.16
CSNK1D-213ENST00000580446 ALG5Q9Y673 324 aa7.79□□□□□ -1.16
CSNK1D-213ENST00000580446 FLGP20930 4061 aaPredicted RBP7.78□□□□□ -1.16
CSNK1D-213ENST00000580446 IGLV8-61A0A075B6I0 122 aa7.78□□□□□ -1.16
CSNK1D-213ENST00000580446 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
CSNK1D-213ENST00000580446 H7C423 109 aa7.78□□□□□ -1.16
CSNK1D-213ENST00000580446 BCE1O60756 84 aa7.78□□□□□ -1.16
CSNK1D-213ENST00000580446 UBE2D4Q9Y2X8 147 aa7.78□□□□□ -1.16
CSNK1D-213ENST00000580446 NDUFA1O15239 70 aa7.77□□□□□ -1.17
CSNK1D-213ENST00000580446 TLX1NBP0CAT3 122 aa7.77□□□□□ -1.17
CSNK1D-213ENST00000580446 AKR1C3P42330 323 aa7.77□□□□□ -1.17
CSNK1D-213ENST00000580446 ZNF726P1Q15940 193 aa7.77□□□□□ -1.17
CSNK1D-213ENST00000580446 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
CSNK1D-213ENST00000580446 C22orf24Q9Y442 160 aa7.77□□□□□ -1.17
CSNK1D-213ENST00000580446 CCDC160A6NGH7 325 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 INMT-MINDY4F8WBC2 141 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 PLA2G10O15496 165 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 NCR2O95944 276 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 ATP6V0CP27449 155 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 S100A5P33763 92 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 CTRLP40313 264 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 XP32Q5T750 250 aa7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 ACTR3CQ9C0K3 210 aaPredicted RBP7.76□□□□□ -1.17
CSNK1D-213ENST00000580446 LINC00469Q8N7U9 141 aa7.75□□□□□ -1.17
CSNK1D-213ENST00000580446 PPP1R1CQ8WVI7 109 aa7.75□□□□□ -1.17
CSNK1D-213ENST00000580446 TMEM242Q9NWH2 141 aa7.75□□□□□ -1.17
CSNK1D-213ENST00000580446 C1orf196B1AJZ1 125 aa7.74□□□□□ -1.17
CSNK1D-213ENST00000580446 H2AFB2P0C5Z0 115 aa7.74□□□□□ -1.17
CSNK1D-213ENST00000580446 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
CSNK1D-213ENST00000580446 SDHAF1A6NFY7 115 aa7.73□□□□□ -1.17
CSNK1D-213ENST00000580446 RPL37AP8A6NKH3 93 aa7.73□□□□□ -1.17
CSNK1D-213ENST00000580446 IL7P13232 177 aa7.73□□□□□ -1.17
CSNK1D-213ENST00000580446 OR10D4PQ8NGN7 298 aa7.73□□□□□ -1.17
CSNK1D-213ENST00000580446 PMCHP20382 165 aa7.72□□□□□ -1.17
CSNK1D-213ENST00000580446 CNPY1Q3B7I2 92 aa7.72□□□□□ -1.17
CSNK1D-213ENST00000580446 CST9LP1Q5W188 147 aa7.72□□□□□ -1.17
CSNK1D-213ENST00000580446 C2orf82Q6UX34 121 aa7.72□□□□□ -1.17
CSNK1D-213ENST00000580446 COX6B2Q6YFQ2 88 aa7.72□□□□□ -1.17
CSNK1D-213ENST00000580446 STOML3Q8TAV4 291 aa7.72□□□□□ -1.17
CSNK1D-213ENST00000580446 RNASE7Q9H1E1 156 aaKnown RBP7.72□□□□□ -1.17
CSNK1D-213ENST00000580446 LYRM1O43325 122 aa7.71□□□□□ -1.18
CSNK1D-213ENST00000580446 MZT2BQ6NZ67 158 aa7.71□□□□□ -1.18
CSNK1D-213ENST00000580446 MRAP2Q96G30 205 aa7.71□□□□□ -1.18
CSNK1D-213ENST00000580446 MPC2O95563 127 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 TRGC1P0CF51 173 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 UBE2AP49459 152 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 FOXA3P55318 350 aaPredicted RBP7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 H2BFSP57053 126 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 BAGE2Q86Y30 109 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 DAND5Q8N907 189 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 MARVELD1Q9BSK0 173 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 XAGE1AQ9HD64 81 aa7.7□□□□□ -1.18
CSNK1D-213ENST00000580446 A0A1B0GVG6 124 aa7.69□□□□□ -1.18
CSNK1D-213ENST00000580446 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
CSNK1D-213ENST00000580446 NOL3O60936 208 aaKnown RBP7.69□□□□□ -1.18
CSNK1D-213ENST00000580446 TMEM241Q24JQ0 296 aa7.69□□□□□ -1.18
CSNK1D-213ENST00000580446 Q6ZUT4 128 aa7.69□□□□□ -1.18
CSNK1D-213ENST00000580446 MRPL52Q86TS9 123 aaKnown RBP7.69□□□□□ -1.18
CSNK1D-213ENST00000580446 KRTAP13-1Q8IUC0 172 aa7.69□□□□□ -1.18
CSNK1D-213ENST00000580446 SCO2A0A1W2PP80 73 aa7.68□□□□□ -1.18
CSNK1D-213ENST00000580446 NDUFC2-KCTD14E9PQ53 114 aa7.68□□□□□ -1.18
CSNK1D-213ENST00000580446 I3L3M4 83 aa7.68□□□□□ -1.18
CSNK1D-213ENST00000580446 LBHQ53QV2 105 aaPredicted RBP7.68□□□□□ -1.18
CSNK1D-213ENST00000580446 MBP02144 154 aa7.67□□□□□ -1.18
CSNK1D-213ENST00000580446 PSMG3Q9BT73 122 aaPredicted RBP7.67□□□□□ -1.18
CSNK1D-213ENST00000580446 NKX6-2Q9C056 277 aaPredicted RBP7.67□□□□□ -1.18
CSNK1D-213ENST00000580446 CTXND1A0A1B0GTU2 59 aa7.66□□□□□ -1.18
CSNK1D-213ENST00000580446 CTAG1AP78358 180 aa7.66□□□□□ -1.18
CSNK1D-213ENST00000580446 MRPL55Q7Z7F7 128 aaKnown RBP7.66□□□□□ -1.18
CSNK1D-213ENST00000580446 NEBP20929 6669 aa7.65□□□□□ -1.18
CSNK1D-213ENST00000580446 PRLHP81277 87 aa7.65□□□□□ -1.18
CSNK1D-213ENST00000580446 TWIST1Q15672 202 aa7.65□□□□□ -1.18
CSNK1D-213ENST00000580446 SPAG11AQ6PDA7 123 aa7.65□□□□□ -1.18
CSNK1D-213ENST00000580446 TNFSF18Q9UNG2 199 aa7.65□□□□□ -1.18
CSNK1D-213ENST00000580446 C4orf48Q5BLP8 95 aa7.64□□□□□ -1.19
CSNK1D-213ENST00000580446 PACRGQ96M98 296 aaPredicted RBP7.64□□□□□ -1.19
CSNK1D-213ENST00000580446 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
CSNK1D-213ENST00000580446 C7orf77A4D0Y5 90 aa7.63□□□□□ -1.19
CSNK1D-213ENST00000580446 F8WDY8 70 aa7.63□□□□□ -1.19
CSNK1D-213ENST00000580446 PAGE4O60829 102 aa7.63□□□□□ -1.19
CSNK1D-213ENST00000580446 SERF2P84101 59 aa7.63□□□□□ -1.19
CSNK1D-213ENST00000580446 KIAA0087Q14695 138 aa7.63□□□□□ -1.19
CSNK1D-213ENST00000580446 Q8NBF4 154 aa7.63□□□□□ -1.19
CSNK1D-213ENST00000580446 MAP1LC3B2A6NCE7 125 aa7.62□□□□□ -1.19
CSNK1D-213ENST00000580446 KRTAP6-3Q3LI67 103 aa7.62□□□□□ -1.19
CSNK1D-213ENST00000580446 MAP1LC3BQ9GZQ8 125 aa7.62□□□□□ -1.19
CSNK1D-213ENST00000580446 IGHV3OR16-9A0A0B4J2B5 98 aa7.61□□□□□ -1.19
CSNK1D-213ENST00000580446 A0A1B0GV50 99 aa7.61□□□□□ -1.19
CSNK1D-213ENST00000580446 LCE2BO14633 110 aa7.61□□□□□ -1.19
CSNK1D-213ENST00000580446 PET100P0DJ07 73 aa7.61□□□□□ -1.19
CSNK1D-213ENST00000580446 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
CSNK1D-213ENST00000580446 IFNA1P01562 189 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms