RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 IGHV3-33P01772 117 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 IGHV3-30-3P0DP02 117 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 IGHV3-30-5P0DP03 117 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 RAB5AP20339 215 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 PKIAP61925 76 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 GAGE6Q13070 117 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 LINC01556Q5JQF7 62 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 LRP2P98164 4655 aa12.86□□□□□ -0.35
LIMD2-209ENST00000580222 PKHD1L1Q86WI1 4243 aa12.85□□□□□ -0.35
LIMD2-209ENST00000580222 A0A087WX48 190 aa12.85□□□□□ -0.35
LIMD2-209ENST00000580222 PRSS47A8MTI9 375 aa12.85□□□□□ -0.35
LIMD2-209ENST00000580222 KRTAP10-4P60372 401 aaPredicted RBP12.85□□□□□ -0.35
LIMD2-209ENST00000580222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
LIMD2-209ENST00000580222 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
LIMD2-209ENST00000580222 Q8N8P6 123 aa12.84□□□□□ -0.35
LIMD2-209ENST00000580222 CHCHD7Q9BUK0 85 aa12.84□□□□□ -0.35
LIMD2-209ENST00000580222 NXT2Q9NPJ8 142 aaKnown RBP12.84□□□□□ -0.35
LIMD2-209ENST00000580222 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
LIMD2-209ENST00000580222 Q8N3U1 123 aa12.83□□□□□ -0.36
LIMD2-209ENST00000580222 TRGC2P03986 189 aa12.82□□□□□ -0.36
LIMD2-209ENST00000580222 MPV17L2Q567V2 206 aa12.82□□□□□ -0.36
LIMD2-209ENST00000580222 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
LIMD2-209ENST00000580222 PRSS3P2Q8NHM4 247 aa12.82□□□□□ -0.36
LIMD2-209ENST00000580222 ESDP10768 282 aa12.81□□□□□ -0.36
LIMD2-209ENST00000580222 IFI27P40305 119 aaPredicted RBP12.81□□□□□ -0.36
LIMD2-209ENST00000580222 AMMECR1LQ6DCA0 310 aa12.81□□□□□ -0.36
LIMD2-209ENST00000580222 NTN5Q8WTR8 489 aaPredicted RBP12.81□□□□□ -0.36
LIMD2-209ENST00000580222 H7C423 109 aa12.8□□□□□ -0.36
LIMD2-209ENST00000580222 K7EP13 123 aa12.8□□□□□ -0.36
LIMD2-209ENST00000580222 Q6ZSA8 131 aa12.8□□□□□ -0.36
LIMD2-209ENST00000580222 C18orf32Q8TCD1 76 aa12.8□□□□□ -0.36
LIMD2-209ENST00000580222 TMEM18Q96B42 140 aa12.8□□□□□ -0.36
LIMD2-209ENST00000580222 OXTP01178 125 aa12.79□□□□□ -0.36
LIMD2-209ENST00000580222 RNASEKQ6P5S7 137 aaKnown RBP12.79□□□□□ -0.36
LIMD2-209ENST00000580222 Q8N814 137 aa12.79□□□□□ -0.36
LIMD2-209ENST00000580222 Q8N976 141 aa12.79□□□□□ -0.36
LIMD2-209ENST00000580222 K7EMI3 77 aa12.78□□□□□ -0.36
LIMD2-209ENST00000580222 ANGP03950 147 aaKnown RBP12.78□□□□□ -0.36
LIMD2-209ENST00000580222 RBX1P62877 108 aa12.78□□□□□ -0.36
LIMD2-209ENST00000580222 ORMDL2Q53FV1 153 aa12.78□□□□□ -0.36
LIMD2-209ENST00000580222 FA2HQ7L5A8 372 aa12.78□□□□□ -0.36
LIMD2-209ENST00000580222 FGF6P10767 208 aa12.77□□□□□ -0.37
LIMD2-209ENST00000580222 LAGE3Q14657 143 aa12.77□□□□□ -0.37
LIMD2-209ENST00000580222 C20orf203Q8NBC4 194 aa12.77□□□□□ -0.37
LIMD2-209ENST00000580222 KLK12Q9UKR0 248 aa12.77□□□□□ -0.37
LIMD2-209ENST00000580222 SMAGPQ0VAQ4 97 aa12.76□□□□□ -0.37
LIMD2-209ENST00000580222 TMEM101Q96IK0 257 aa12.76□□□□□ -0.37
LIMD2-209ENST00000580222 A0A1B0GUV1 79 aa12.75□□□□□ -0.37
LIMD2-209ENST00000580222 IBA57-AS1B1ANH7 110 aa12.75□□□□□ -0.37
LIMD2-209ENST00000580222 CRPP02741 224 aa12.75□□□□□ -0.37
LIMD2-209ENST00000580222 ZNF25P17030 456 aaPredicted RBP12.75□□□□□ -0.37
LIMD2-209ENST00000580222 IGLV4-60A0A075B6I1 120 aa12.74□□□□□ -0.37
LIMD2-209ENST00000580222 RPL39P62891 51 aaKnown RBP12.74□□□□□ -0.37
LIMD2-209ENST00000580222 WFDC2Q14508 124 aa12.74□□□□□ -0.37
LIMD2-209ENST00000580222 OR5A1Q8NGJ0 315 aa12.74□□□□□ -0.37
LIMD2-209ENST00000580222 Q9HAA7 133 aa12.74□□□□□ -0.37
LIMD2-209ENST00000580222 PSCAO43653 123 aa12.73□□□□□ -0.37
LIMD2-209ENST00000580222 RAB5BP61020 215 aa12.73□□□□□ -0.37
LIMD2-209ENST00000580222 DGAT2L7PQ6IED9 249 aa12.73□□□□□ -0.37
LIMD2-209ENST00000580222 CLPSL2Q6UWE3 100 aa12.73□□□□□ -0.37
LIMD2-209ENST00000580222 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
LIMD2-209ENST00000580222 UBE2WQ96B02 151 aa12.73□□□□□ -0.37
LIMD2-209ENST00000580222 CYSLTR1Q9Y271 337 aa12.73□□□□□ -0.37
LIMD2-209ENST00000580222 UBE2D4Q9Y2X8 147 aa12.73□□□□□ -0.37
LIMD2-209ENST00000580222 C2orf66Q6UXQ4 117 aa12.72□□□□□ -0.37
LIMD2-209ENST00000580222 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
LIMD2-209ENST00000580222 LINC01546A6NGU7 62 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 LINC00614P0C842 121 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 G0S2P27469 103 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 SCXQ7RTU7 201 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 BAGE3Q86Y29 109 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 LINC00269Q8N2A0 174 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 URB1-AS1Q96HZ7 61 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 TIMM21Q9BVV7 248 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 SPANXA1Q9NS26 97 aa12.71□□□□□ -0.37
LIMD2-209ENST00000580222 TNXBP22105 4242 aa12.71□□□□□ -0.38
LIMD2-209ENST00000580222 TRAV8-3A0A0A6YYJ7 113 aa12.7□□□□□ -0.38
LIMD2-209ENST00000580222 LINC01620Q4KN68 170 aa12.7□□□□□ -0.38
LIMD2-209ENST00000580222 REG3AQ06141 175 aa12.69□□□□□ -0.38
LIMD2-209ENST00000580222 Q0VG73 95 aa12.69□□□□□ -0.38
LIMD2-209ENST00000580222 IGKV3OR2-268A0A0C4DH90 116 aa12.68□□□□□ -0.38
LIMD2-209ENST00000580222 ENHOQ6UWT2 76 aa12.68□□□□□ -0.38
LIMD2-209ENST00000580222 Q6ZUT4 128 aa12.68□□□□□ -0.38
LIMD2-209ENST00000580222 CSDC2Q9Y534 153 aaKnown RBP12.68□□□□□ -0.38
LIMD2-209ENST00000580222 MIAQ16674 131 aa12.67□□□□□ -0.38
LIMD2-209ENST00000580222 ZNF664Q8N3J9 261 aa12.67□□□□□ -0.38
LIMD2-209ENST00000580222 TOMM6Q96B49 74 aa12.67□□□□□ -0.38
LIMD2-209ENST00000580222 CHCHD1Q96BP2 118 aaKnown RBP12.67□□□□□ -0.38
LIMD2-209ENST00000580222 RMI2Q96E14 147 aa12.67□□□□□ -0.38
LIMD2-209ENST00000580222 CDC42SE2Q9NRR3 84 aa12.67□□□□□ -0.38
LIMD2-209ENST00000580222 PRR34Q9NV39 138 aa12.67□□□□□ -0.38
LIMD2-209ENST00000580222 IGKV2D-24A0A075B6R9 120 aa12.66□□□□□ -0.38
LIMD2-209ENST00000580222 C1orf196B1AJZ1 125 aa12.66□□□□□ -0.38
LIMD2-209ENST00000580222 HNRNPA3P51991 378 aaKnown RBP12.66□□□□□ -0.38
LIMD2-209ENST00000580222 RNASE13Q5GAN3 156 aaKnown RBP12.66□□□□□ -0.38
LIMD2-209ENST00000580222 PYGO1Q9Y3Y4 419 aa12.66□□□□□ -0.38
LIMD2-209ENST00000580222 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BKO60814 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 HIST1H2BJP06899 126 aa12.65□□□□□ -0.38
LIMD2-209ENST00000580222 MT1HL1P0DM35 61 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms