RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
SREBF1-218ENST00000578469 COX8AP10176 69 aa11.9□□□□□ -0.5
SREBF1-218ENST00000578469 GYPEP15421 78 aa11.9□□□□□ -0.5
SREBF1-218ENST00000578469 OPRPNQ99935 248 aaPredicted RBP11.9□□□□□ -0.5
SREBF1-218ENST00000578469 RETNQ9HD89 108 aa11.9□□□□□ -0.5
SREBF1-218ENST00000578469 H7C423 109 aa11.89□□□□□ -0.51
SREBF1-218ENST00000578469 MRPS36P82909 103 aaKnown RBP11.89□□□□□ -0.51
SREBF1-218ENST00000578469 CASC10Q5T4H9 136 aa11.89□□□□□ -0.51
SREBF1-218ENST00000578469 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
SREBF1-218ENST00000578469 ATP6V0E2Q8NHE4 81 aa11.89□□□□□ -0.51
SREBF1-218ENST00000578469 DNAH7Q8WXX0 4024 aa11.88□□□□□ -0.51
SREBF1-218ENST00000578469 NMUP48645 174 aa11.88□□□□□ -0.51
SREBF1-218ENST00000578469 AMELXQ99217 191 aa11.88□□□□□ -0.51
SREBF1-218ENST00000578469 C2orf88Q9BSF0 95 aa11.88□□□□□ -0.51
SREBF1-218ENST00000578469 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
SREBF1-218ENST00000578469 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
SREBF1-218ENST00000578469 F5H768 121 aa11.87□□□□□ -0.51
SREBF1-218ENST00000578469 HERVK_113P61574 105 aa11.87□□□□□ -0.51
SREBF1-218ENST00000578469 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
SREBF1-218ENST00000578469 CEMP1Q6PRD7 247 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-218ENST00000578469 MRPL52Q86TS9 123 aaKnown RBP11.87□□□□□ -0.51
SREBF1-218ENST00000578469 SBSPONQ8IVN8 264 aa11.87□□□□□ -0.51
SREBF1-218ENST00000578469 TENM2Q9NT68 2774 aa11.86□□□□□ -0.51
SREBF1-218ENST00000578469 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
SREBF1-218ENST00000578469 FGF6P10767 208 aa11.86□□□□□ -0.51
SREBF1-218ENST00000578469 NFE4Q86UQ8 179 aa11.86□□□□□ -0.51
SREBF1-218ENST00000578469 TMEM101Q96IK0 257 aa11.86□□□□□ -0.51
SREBF1-218ENST00000578469 MRPS16Q9Y3D3 137 aaKnown RBP11.86□□□□□ -0.51
SREBF1-218ENST00000578469 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
SREBF1-218ENST00000578469 SACSQ9NZJ4 4579 aa11.86□□□□□ -0.51
SREBF1-218ENST00000578469 BIRC6Q9NR09 4857 aa11.85□□□□□ -0.51
SREBF1-218ENST00000578469 C11orf86A6NJI1 115 aa11.85□□□□□ -0.51
SREBF1-218ENST00000578469 DLEU1O43261 78 aa11.85□□□□□ -0.51
SREBF1-218ENST00000578469 HTN3P15516 51 aa11.85□□□□□ -0.51
SREBF1-218ENST00000578469 TCTAP57738 103 aa11.85□□□□□ -0.51
SREBF1-218ENST00000578469 CTAG1AP78358 180 aa11.85□□□□□ -0.51
SREBF1-218ENST00000578469 SPATA25Q9BR10 227 aa11.85□□□□□ -0.51
SREBF1-218ENST00000578469 Q6ZUT4 128 aa11.84□□□□□ -0.51
SREBF1-218ENST00000578469 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
SREBF1-218ENST00000578469 OR5A1Q8NGJ0 315 aa11.84□□□□□ -0.51
SREBF1-218ENST00000578469 VSIG2Q96IQ7 327 aa11.84□□□□□ -0.51
SREBF1-218ENST00000578469 CHAC1Q9BUX1 264 aa11.84□□□□□ -0.51
SREBF1-218ENST00000578469 EPPK1P58107 5090 aaKnown RBP11.83□□□□□ -0.52
SREBF1-218ENST00000578469 A0A0J9YY99 117 aa11.83□□□□□ -0.52
SREBF1-218ENST00000578469 M0R143 59 aa11.83□□□□□ -0.52
SREBF1-218ENST00000578469 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.52
SREBF1-218ENST00000578469 C12orf74Q32Q52 190 aa11.83□□□□□ -0.52
SREBF1-218ENST00000578469 TMEM170BQ5T4T1 132 aa11.83□□□□□ -0.52
SREBF1-218ENST00000578469 SH2D6Q7Z4S9 175 aa11.83□□□□□ -0.52
SREBF1-218ENST00000578469 HUWE1Q7Z6Z7 4374 aaKnown RBP11.83□□□□□ -0.52
SREBF1-218ENST00000578469 TRAV26-1A0A087WT03 109 aa11.82□□□□□ -0.52
SREBF1-218ENST00000578469 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
SREBF1-218ENST00000578469 LCE6AA0A183 80 aa11.82□□□□□ -0.52
SREBF1-218ENST00000578469 E9PLD3 99 aa11.82□□□□□ -0.52
SREBF1-218ENST00000578469 MRPL23Q16540 153 aaKnown RBP11.82□□□□□ -0.52
SREBF1-218ENST00000578469 FAM104AQ969W3 186 aa11.82□□□□□ -0.52
SREBF1-218ENST00000578469 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
SREBF1-218ENST00000578469 IGKV2D-26A0A0A0MRZ7 120 aa11.81□□□□□ -0.52
SREBF1-218ENST00000578469 SIVA1O15304 175 aa11.81□□□□□ -0.52
SREBF1-218ENST00000578469 GAGE6Q13070 117 aa11.81□□□□□ -0.52
SREBF1-218ENST00000578469 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
SREBF1-218ENST00000578469 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
SREBF1-218ENST00000578469 TINCRA0A1B0GVN0 87 aa11.8□□□□□ -0.52
SREBF1-218ENST00000578469 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
SREBF1-218ENST00000578469 A0A0J9YWU9 116 aa11.79□□□□□ -0.52
SREBF1-218ENST00000578469 SEC11AP67812 179 aa11.79□□□□□ -0.52
SREBF1-218ENST00000578469 TM2D3Q9BRN9 247 aa11.79□□□□□ -0.52
SREBF1-218ENST00000578469 GEMIN7Q9H840 131 aaKnown RBP11.79□□□□□ -0.52
SREBF1-218ENST00000578469 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
SREBF1-218ENST00000578469 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
SREBF1-218ENST00000578469 TRAV8-6A0A0B4J262 113 aa11.78□□□□□ -0.52
SREBF1-218ENST00000578469 ZNF22P17026 224 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-218ENST00000578469 UBE2D1P51668 147 aa11.78□□□□□ -0.52
SREBF1-218ENST00000578469 LBHQ53QV2 105 aaPredicted RBP11.78□□□□□ -0.52
SREBF1-218ENST00000578469 LYSTQ99698 3801 aa11.78□□□□□ -0.52
SREBF1-218ENST00000578469 A0A096LPF7 62 aa11.77□□□□□ -0.53
SREBF1-218ENST00000578469 H3BNG1 76 aa11.77□□□□□ -0.53
SREBF1-218ENST00000578469 TIRAPP58753 221 aa11.77□□□□□ -0.53
SREBF1-218ENST00000578469 C11orf45Q8TAV5 145 aa11.77□□□□□ -0.53
SREBF1-218ENST00000578469 SNHG12Q9BXW3 62 aa11.77□□□□□ -0.53
SREBF1-218ENST00000578469 TMEM223A0PJW6 202 aa11.76□□□□□ -0.53
SREBF1-218ENST00000578469 C2orf91Q6ZV80 131 aa11.76□□□□□ -0.53
SREBF1-218ENST00000578469 TP73-AS1Q9UF72 201 aa11.76□□□□□ -0.53
SREBF1-218ENST00000578469 TMEM262E9PQX1 116 aa11.75□□□□□ -0.53
SREBF1-218ENST00000578469 H3BRM9 83 aa11.75□□□□□ -0.53
SREBF1-218ENST00000578469 EREGO14944 169 aa11.75□□□□□ -0.53
SREBF1-218ENST00000578469 HERVK_113P63121 156 aa11.75□□□□□ -0.53
SREBF1-218ENST00000578469 Q6ZTC4 211 aa11.75□□□□□ -0.53
SREBF1-218ENST00000578469 HIGD1BQ9P298 99 aa11.75□□□□□ -0.53
SREBF1-218ENST00000578469 MYMXA0A1B0GTQ4 84 aa11.74□□□□□ -0.53
SREBF1-218ENST00000578469 LEPROTO15243 131 aa11.74□□□□□ -0.53
SREBF1-218ENST00000578469 BATFQ16520 125 aa11.74□□□□□ -0.53
SREBF1-218ENST00000578469 ZFAND6Q6FIF0 208 aa11.74□□□□□ -0.53
SREBF1-218ENST00000578469 FAM19A3Q7Z5A8 133 aa11.74□□□□□ -0.53
SREBF1-218ENST00000578469 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
SREBF1-218ENST00000578469 PLEKHB2Q96CS7 222 aa11.74□□□□□ -0.53
SREBF1-218ENST00000578469 TRAV13-1A0A0B4J241 112 aa11.73□□□□□ -0.53
SREBF1-218ENST00000578469 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
SREBF1-218ENST00000578469 LGALS3P17931 250 aaKnown RBP11.73□□□□□ -0.53
SREBF1-218ENST00000578469 HINT1P49773 126 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms