RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 BAGE3Q86Y29 109 aa9.34□□□□□ -0.91
LINC01543-201ENST00000578367 ZNF664Q8N3J9 261 aa9.34□□□□□ -0.91
LINC01543-201ENST00000578367 TIMM17AQ99595 171 aa9.34□□□□□ -0.91
LINC01543-201ENST00000578367 M0R2N4 97 aa9.33□□□□□ -0.92
LINC01543-201ENST00000578367 REG3AQ06141 175 aa9.33□□□□□ -0.92
LINC01543-201ENST00000578367 URB1-AS1Q96HZ7 61 aa9.33□□□□□ -0.92
LINC01543-201ENST00000578367 RYR2Q92736 4967 aa9.33□□□□□ -0.92
LINC01543-201ENST00000578367 C1orf196B1AJZ1 125 aa9.32□□□□□ -0.92
LINC01543-201ENST00000578367 RPL39P62891 51 aaKnown RBP9.32□□□□□ -0.92
LINC01543-201ENST00000578367 ENHOQ6UWT2 76 aa9.32□□□□□ -0.92
LINC01543-201ENST00000578367 ERASQ7Z444 233 aa9.32□□□□□ -0.92
LINC01543-201ENST00000578367 LINC00269Q8N2A0 174 aa9.32□□□□□ -0.92
LINC01543-201ENST00000578367 Q8N3U1 123 aa9.32□□□□□ -0.92
LINC01543-201ENST00000578367 UBE2WQ96B02 151 aa9.32□□□□□ -0.92
LINC01543-201ENST00000578367 TMEM141Q96I45 108 aa9.32□□□□□ -0.92
LINC01543-201ENST00000578367 IGIPA6NJ69 53 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BKO60814 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HBDP02042 147 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BJP06899 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BOP23527 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BBP33778 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BDP58876 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BCP62807 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST2H2BEQ16778 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.31□□□□□ -0.92
LINC01543-201ENST00000578367 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BHQ93079 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BNQ99877 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 HIST1H2BMQ99879 126 aa9.31□□□□□ -0.92
LINC01543-201ENST00000578367 Q6ZN92 141 aa9.3□□□□□ -0.92
LINC01543-201ENST00000578367 C1orf43Q9BWL3 253 aa9.3□□□□□ -0.92
LINC01543-201ENST00000578367 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
LINC01543-201ENST00000578367 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
LINC01543-201ENST00000578367 HYDINQ4G0P3 5121 aa9.3□□□□□ -0.92
LINC01543-201ENST00000578367 HSBP1O75506 76 aa9.29□□□□□ -0.92
LINC01543-201ENST00000578367 COA6Q5JTJ3 125 aaKnown RBP9.29□□□□□ -0.92
LINC01543-201ENST00000578367 SCGB3A1Q96QR1 104 aa9.29□□□□□ -0.92
LINC01543-201ENST00000578367 IGLV4-3A0A075B6K6 122 aa9.28□□□□□ -0.92
LINC01543-201ENST00000578367 ATP5LO75964 103 aa9.28□□□□□ -0.92
LINC01543-201ENST00000578367 PDZD11Q5EBL8 140 aa9.28□□□□□ -0.92
LINC01543-201ENST00000578367 TEX43Q6ZNM6 134 aa9.28□□□□□ -0.92
LINC01543-201ENST00000578367 Q6ZRN7 208 aaPredicted RBP9.28□□□□□ -0.92
LINC01543-201ENST00000578367 VCX2Q9H322 139 aa9.28□□□□□ -0.92
LINC01543-201ENST00000578367 Q9HAA7 133 aa9.28□□□□□ -0.92
LINC01543-201ENST00000578367 A0A096LNJ9 63 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 LINC00959A0A1B0GUT2 108 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.27□□□□□ -0.93
LINC01543-201ENST00000578367 SERF1AO75920 110 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 SS18Q15532 418 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 Q6ZUT4 128 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 FAM104AQ969W3 186 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 AMELXQ99217 191 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 C2orf88Q9BSF0 95 aa9.27□□□□□ -0.93
LINC01543-201ENST00000578367 IGKV2D-24A0A075B6R9 120 aa9.26□□□□□ -0.93
LINC01543-201ENST00000578367 RTL8CO15255 209 aa9.26□□□□□ -0.93
LINC01543-201ENST00000578367 PSCAO43653 123 aa9.26□□□□□ -0.93
LINC01543-201ENST00000578367 PACRGQ96M98 296 aaPredicted RBP9.26□□□□□ -0.93
LINC01543-201ENST00000578367 LINC00310P59036 64 aa9.25□□□□□ -0.93
LINC01543-201ENST00000578367 SEC11AP67812 179 aa9.25□□□□□ -0.93
LINC01543-201ENST00000578367 DNAH2Q9P225 4427 aa9.24□□□□□ -0.93
LINC01543-201ENST00000578367 IFITM10A6NMD0 228 aa9.24□□□□□ -0.93
LINC01543-201ENST00000578367 CLPSL2Q6UWE3 100 aa9.24□□□□□ -0.93
LINC01543-201ENST00000578367 CD164L2Q6UWJ8 174 aa9.24□□□□□ -0.93
LINC01543-201ENST00000578367 FAM19A3Q7Z5A8 133 aa9.24□□□□□ -0.93
LINC01543-201ENST00000578367 KRTAP26-1Q6PEX3 210 aa9.23□□□□□ -0.93
LINC01543-201ENST00000578367 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
LINC01543-201ENST00000578367 OPRPNQ99935 248 aaPredicted RBP9.23□□□□□ -0.93
LINC01543-201ENST00000578367 HSPB8Q9UJY1 196 aa9.23□□□□□ -0.93
LINC01543-201ENST00000578367 RYR3Q15413 4870 aa9.23□□□□□ -0.93
LINC01543-201ENST00000578367 TRAV13-1A0A0B4J241 112 aa9.22□□□□□ -0.93
LINC01543-201ENST00000578367 EREGO14944 169 aa9.22□□□□□ -0.93
LINC01543-201ENST00000578367 LEPROTL1O95214 131 aa9.22□□□□□ -0.93
LINC01543-201ENST00000578367 UBE2D1P51668 147 aa9.22□□□□□ -0.93
LINC01543-201ENST00000578367 PMVKQ15126 192 aa9.22□□□□□ -0.93
LINC01543-201ENST00000578367 IGKV3OR2-268A0A0C4DH90 116 aa9.21□□□□□ -0.94
LINC01543-201ENST00000578367 PMCHL1Q16048 86 aa9.21□□□□□ -0.94
LINC01543-201ENST00000578367 C14orf177Q52M58 125 aa9.21□□□□□ -0.94
LINC01543-201ENST00000578367 CFAP161Q6P656 301 aa9.21□□□□□ -0.94
LINC01543-201ENST00000578367 LINC00173Q6ZV60 143 aa9.21□□□□□ -0.94
LINC01543-201ENST00000578367 BAALCQ8WXS3 180 aa9.21□□□□□ -0.94
LINC01543-201ENST00000578367 CST9LQ9H4G1 147 aa9.21□□□□□ -0.94
LINC01543-201ENST00000578367 IGLV10-54A0A075B6I4 117 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 TRAV12-1A0A0B4J245 112 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 PRSS29PA6NIE9 313 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 NUPR1O60356 82 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 HERVK_113P63121 156 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 RNASE13Q5GAN3 156 aaKnown RBP9.2□□□□□ -0.94
LINC01543-201ENST00000578367 LINC01561Q8N1V8 128 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 FAM19A2Q8N3H0 131 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 IFI27L1Q96BM0 104 aa9.2□□□□□ -0.94
LINC01543-201ENST00000578367 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
LINC01543-201ENST00000578367 LRCOL1A6NCL2 159 aa9.19□□□□□ -0.94
LINC01543-201ENST00000578367 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
LINC01543-201ENST00000578367 XCL1P47992 114 aa9.19□□□□□ -0.94
LINC01543-201ENST00000578367 NDUFA6P56556 154 aa9.19□□□□□ -0.94
LINC01543-201ENST00000578367 FOXI1Q12951 378 aa9.19□□□□□ -0.94
LINC01543-201ENST00000578367 DNAH17Q9UFH2 4485 aa9.19□□□□□ -0.94
LINC01543-201ENST00000578367 A0A087WTM6 91 aa9.18□□□□□ -0.94
LINC01543-201ENST00000578367 IGHV3OR16-9A0A0B4J2B5 98 aa9.18□□□□□ -0.94
LINC01543-201ENST00000578367 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms