RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 COMMD6Q7Z4G1 85 aa-0.22□□□□□ -2.44
SNRPD1-202ENST00000577906 C5orf38Q86SI9 138 aa-0.22□□□□□ -2.44
SNRPD1-202ENST00000577906 PP6455Q8WZ26 134 aa-0.22□□□□□ -2.44
SNRPD1-202ENST00000577906 LINC00474Q9P2X8 69 aa-0.22□□□□□ -2.44
SNRPD1-202ENST00000577906 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.22□□□□□ -2.44
SNRPD1-202ENST00000577906 ROCK2O75116 1388 aaKnown RBP-0.22□□□□□ -2.45
SNRPD1-202ENST00000577906 PKDREJQ9NTG1 2253 aa-0.22□□□□□ -2.45
SNRPD1-202ENST00000577906 PLCE1Q9P212 2302 aa-0.22□□□□□ -2.45
SNRPD1-202ENST00000577906 IGLC7A0M8Q6 106 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 OOSP1A8MZH6 123 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 UQCR11O14957 56 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 SSSCA1O60232 199 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 IFNGP01579 166 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 S100A3P33764 101 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 DEFB109BQ30KR1 87 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 Q5VSD8 79 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 Q6JHZ5 121 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 TP53AIP1Q9HCN2 124 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 LINC01558Q9Y6Z2 57 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 ZNF236Q9UL36 1845 aa-0.23□□□□□ -2.45
SNRPD1-202ENST00000577906 PTPN13Q12923 2485 aa-0.24□□□□□ -2.45
SNRPD1-202ENST00000577906 HMGN4O00479 90 aa-0.24□□□□□ -2.45
SNRPD1-202ENST00000577906 KRTAP6-1Q3LI64 71 aa-0.24□□□□□ -2.45
SNRPD1-202ENST00000577906 RPL13AP3Q6NVV1 102 aa-0.24□□□□□ -2.45
SNRPD1-202ENST00000577906 ERCC6L2Q5T890 1561 aa-0.24□□□□□ -2.45
SNRPD1-202ENST00000577906 KDM3BQ7LBC6 1761 aa-0.24□□□□□ -2.45
SNRPD1-202ENST00000577906 PLXNB2O15031 1838 aa-0.24□□□□□ -2.45
SNRPD1-202ENST00000577906 MYH8P13535 1937 aa-0.25□□□□□ -2.45
SNRPD1-202ENST00000577906 I3L2K1 104 aa-0.25□□□□□ -2.45
SNRPD1-202ENST00000577906 TPPP2P59282 170 aa-0.25□□□□□ -2.45
SNRPD1-202ENST00000577906 WNK3Q9BYP7 1800 aa-0.25□□□□□ -2.45
SNRPD1-202ENST00000577906 LRRC37A2A6NM11 1700 aa-0.26□□□□□ -2.45
SNRPD1-202ENST00000577906 BCL9LQ86UU0 1499 aa-0.26□□□□□ -2.45
SNRPD1-202ENST00000577906 SPRR1AP35321 89 aa-0.26□□□□□ -2.45
SNRPD1-202ENST00000577906 LPAP08519 4548 aa-0.27□□□□□ -2.45
SNRPD1-202ENST00000577906 HSPG2P98160 4391 aa-0.27□□□□□ -2.45
SNRPD1-202ENST00000577906 APOC3P02656 99 aa-0.27□□□□□ -2.45
SNRPD1-202ENST00000577906 MRPL54Q6P161 138 aaKnown RBP-0.27□□□□□ -2.45
SNRPD1-202ENST00000577906 DOPEY2Q9Y3R5 2298 aa-0.27□□□□□ -2.45
SNRPD1-202ENST00000577906 MYCBP2O75592 4640 aa-0.28□□□□□ -2.45
SNRPD1-202ENST00000577906 CHD6Q8TD26 2715 aa-0.28□□□□□ -2.45
SNRPD1-202ENST00000577906 A2ML1A8K2U0 1454 aa-0.28□□□□□ -2.45
SNRPD1-202ENST00000577906 LOC285095A0A1B0GVY8 99 aa-0.28□□□□□ -2.45
SNRPD1-202ENST00000577906 TNFP01375 233 aa-0.28□□□□□ -2.45
SNRPD1-202ENST00000577906 TENM4Q6N022 2769 aa-0.28□□□□□ -2.45
SNRPD1-202ENST00000577906 MYH7P12883 1935 aa-0.28□□□□□ -2.46
SNRPD1-202ENST00000577906 KMT2AQ03164 3969 aa-0.29□□□□□ -2.46
SNRPD1-202ENST00000577906 USF3Q68DE3 2245 aa-0.29□□□□□ -2.46
SNRPD1-202ENST00000577906 A0A1B0GV90 55 aa-0.29□□□□□ -2.46
SNRPD1-202ENST00000577906 EFCAB10A6NFE3 127 aa-0.29□□□□□ -2.46
SNRPD1-202ENST00000577906 SFT2D2O95562 160 aa-0.29□□□□□ -2.46
SNRPD1-202ENST00000577906 C9orf153Q5TBE3 101 aa-0.29□□□□□ -2.46
SNRPD1-202ENST00000577906 MYOZ3Q8TDC0 251 aa-0.29□□□□□ -2.46
SNRPD1-202ENST00000577906 C10orf71Q711Q0 1435 aa-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 KTN1Q86UP2 1357 aaKnown RBP-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 RIMS1Q86UR5 1692 aaKnown RBP-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 CHKB-CPT1BH3BT56 60 aa-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 DLEU1O43261 78 aa-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 DCDP81605 110 aaKnown RBP-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 DPH3P1Q9H4G8 78 aa-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 DOCK2Q92608 1830 aa-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 STAB1Q9NY15 2570 aa-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 PPRC1Q5VV67 1664 aaKnown RBP-0.3□□□□□ -2.46
SNRPD1-202ENST00000577906 PKD1L1Q8TDX9 2849 aa-0.31□□□□□ -2.46
SNRPD1-202ENST00000577906 TRBV6-1A0A0K0K1D8 114 aa-0.31□□□□□ -2.46
SNRPD1-202ENST00000577906 SNAPC5O75971 98 aa-0.31□□□□□ -2.46
SNRPD1-202ENST00000577906 VWFP04275 2813 aa-0.31□□□□□ -2.46
SNRPD1-202ENST00000577906 KIF21AQ7Z4S6 1674 aa-0.31□□□□□ -2.46
SNRPD1-202ENST00000577906 QRICH2Q9H0J4 1663 aa-0.31□□□□□ -2.46
SNRPD1-202ENST00000577906 FXYD6-FXYD2A0A087WZ82 144 aa-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 UBE2L5PA0A1B0GUS4 154 aa-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 UBE2L3P68036 154 aaKnown RBP-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 PIGYQ3MUY2 71 aa-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 CDC42SE2Q9NRR3 84 aa-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 FLNAP21333 2647 aaKnown RBP-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 FAT2Q9NYQ8 4349 aa-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 SPTBN1Q01082 2364 aaKnown RBP-0.32□□□□□ -2.46
SNRPD1-202ENST00000577906 MYO7BQ6PIF6 2116 aa-0.33□□□□□ -2.46
SNRPD1-202ENST00000577906 ROBO1Q9Y6N7 1651 aa-0.33□□□□□ -2.46
SNRPD1-202ENST00000577906 LRP2P98164 4655 aa-0.34□□□□□ -2.46
SNRPD1-202ENST00000577906 GOLGA4Q13439 2230 aaKnown RBP-0.34□□□□□ -2.46
SNRPD1-202ENST00000577906 PRM1P04553 51 aa-0.34□□□□□ -2.46
SNRPD1-202ENST00000577906 IGLC1P0CG04 106 aa-0.34□□□□□ -2.46
SNRPD1-202ENST00000577906 SHANK2Q9UPX8 1470 aa-0.35□□□□□ -2.46
SNRPD1-202ENST00000577906 FAM24AA6NFZ4 105 aa-0.35□□□□□ -2.47
SNRPD1-202ENST00000577906 SPRR4Q96PI1 79 aa-0.35□□□□□ -2.47
SNRPD1-202ENST00000577906 NXT2Q9NPJ8 142 aaKnown RBP-0.35□□□□□ -2.47
SNRPD1-202ENST00000577906 IER3IP1Q9Y5U9 82 aa-0.35□□□□□ -2.47
SNRPD1-202ENST00000577906 GVINP1Q7Z2Y8 2422 aa-0.36□□□□□ -2.47
SNRPD1-202ENST00000577906 NSD3Q9BZ95 1437 aa-0.36□□□□□ -2.47
SNRPD1-202ENST00000577906 MGPP08493 103 aa-0.36□□□□□ -2.47
SNRPD1-202ENST00000577906 SPRR2DP22532 72 aa-0.36□□□□□ -2.47
SNRPD1-202ENST00000577906 GNG11P61952 73 aa-0.36□□□□□ -2.47
SNRPD1-202ENST00000577906 TMEM263Q8WUH6 116 aaKnown RBP-0.36□□□□□ -2.47
SNRPD1-202ENST00000577906 UQCR10Q9UDW1 63 aa-0.36□□□□□ -2.47
SNRPD1-202ENST00000577906 CORTO00230 105 aa-0.37□□□□□ -2.47
SNRPD1-202ENST00000577906 ARL2-SNX15V9GYD0 113 aa-0.37□□□□□ -2.47
SNRPD1-202ENST00000577906 PSME4Q14997 1843 aa-0.37□□□□□ -2.47
SNRPD1-202ENST00000577906 SBF2Q86WG5 1849 aa-0.37□□□□□ -2.47
SNRPD1-202ENST00000577906 PCLOQ9Y6V0 5065 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms