RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 ZNF706Q9Y5V0 76 aaPredicted RBP3.18□□□□□ -1.9
CDH8-205ENST00000577730 LINC01600Q96MT4 127 aa3.18□□□□□ -1.9
CDH8-205ENST00000577730 LITAFQ99732 161 aa3.18□□□□□ -1.9
CDH8-205ENST00000577730 SBF1O95248 1867 aa3.18□□□□□ -1.9
CDH8-205ENST00000577730 PLXNA3P51805 1871 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 SLURP1P55000 103 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 C1orf64Q8NEQ6 169 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 LY6G6EA0A0G2JKS1 128 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 UBE2DNLQ8IWF7 75 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 U3KQA8 63 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 KIAA1217Q5T5P2 1943 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 TRIP12Q14669 1992 aaPredicted RBP3.17□□□□□ -1.9
CDH8-205ENST00000577730 MAP6D1Q9H9H5 199 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 LOC101927531A0A1B0GV80 90 aa3.17□□□□□ -1.9
CDH8-205ENST00000577730 CACNA1IQ9P0X4 2223 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 CABIN1Q9Y6J0 2220 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 TNS1Q9HBL0 1735 aaKnown RBP3.16□□□□□ -1.9
CDH8-205ENST00000577730 LY6LH3BQJ8 138 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 MRGPRG-AS1Q2M3A8 158 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 DEFB136Q30KP8 78 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 KIF25-AS1Q9Y6Z4 181 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 LINC01356Q8N9X3 169 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 GRNP28799 593 aaKnown RBP3.16□□□□□ -1.9
CDH8-205ENST00000577730 C6orf223Q8N319 242 aa3.16□□□□□ -1.9
CDH8-205ENST00000577730 LCTP09848 1927 aa3.15□□□□□ -1.9
CDH8-205ENST00000577730 WISP2O76076 250 aa3.15□□□□□ -1.9
CDH8-205ENST00000577730 PRR3P79522 188 aaKnown RBP3.15□□□□□ -1.9
CDH8-205ENST00000577730 WDR90Q96KV7 1748 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 A0A1B0GU69 56 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 A0A1B0GW54 56 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 DOCK9Q9BZ29 2069 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 IGLV5-45A0A087WSX0 123 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 C11orf72Q8NBR9 251 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 F5P12259 2224 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 DOCK6Q96HP0 2047 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 IGKV2-28A0A075B6P5 120 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 IGKV2D-28P01615 120 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 CDC42SE1Q9NRR8 79 aa3.15□□□□□ -1.91
CDH8-205ENST00000577730 IGHV4-30-4P0DP06 118 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 IGHV4-31P0DP07 118 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 KPRPQ5T749 579 aaPredicted RBP3.14□□□□□ -1.91
CDH8-205ENST00000577730 DEFB123Q8N688 67 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 ATG2BQ96BY7 2078 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 PLXNA2O75051 1894 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 ELOF1P60002 83 aaKnown RBP3.14□□□□□ -1.91
CDH8-205ENST00000577730 Q1T7F1 81 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 IGFL3Q6UXB1 125 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 A0A096LNI7 61 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 IGHV4-61A0A0C4DH41 118 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 FRMPD3Q5JV73 1810 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 SPART-AS1P0CW21 52 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 LINC00315P59091 139 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 PLXNB2O15031 1838 aa3.14□□□□□ -1.91
CDH8-205ENST00000577730 WDR81Q562E7 1941 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 SYCNQ0VAF6 134 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 A6NDX4 124 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 CYSRT1A8MQ03 144 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 FSHBP01225 129 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 BBC3Q96PG8 261 aaPredicted RBP3.13□□□□□ -1.91
CDH8-205ENST00000577730 SHANK1Q9Y566 2161 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 FP248Q71RG6 208 aaPredicted RBP3.13□□□□□ -1.91
CDH8-205ENST00000577730 ZFP36P26651 326 aaKnown RBP3.13□□□□□ -1.91
CDH8-205ENST00000577730 SCN10AQ9Y5Y9 1956 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 DEFB116Q30KQ4 102 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 LINC01554Q52M75 96 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 COA5Q86WW8 74 aa3.13□□□□□ -1.91
CDH8-205ENST00000577730 RALGAPA1Q6GYQ0 2036 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 UNQ6190/PRO20217Q6UXQ8 127 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 Q6ZRU5 148 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 HEATR5AQ86XA9 2040 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 A0A087WSZ3 146 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 EGFEM1PQ0D2K5 195 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 DEFB114Q30KQ6 69 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 GREB1Q4ZG55 1949 aa3.12□□□□□ -1.91
CDH8-205ENST00000577730 FANCMQ8IYD8 2048 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 LOC100131303A0A0U1RQF7 123 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 LINC01006Q8NI28 216 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 C4orf3Q8WVX3 66 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 ANK1P16157 1881 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 DOCK8Q8NF50 2099 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 F8W735 103 aaPredicted RBP3.11□□□□□ -1.91
CDH8-205ENST00000577730 A8MTW9 85 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 SPINT4Q6UDR6 99 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 MYO7AQ13402 2215 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 EIF4EBP3O60516 100 aaPredicted RBP3.11□□□□□ -1.91
CDH8-205ENST00000577730 RYR1P21817 5038 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 IGLV4-60A0A075B6I1 120 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 OXTP01178 125 aa3.11□□□□□ -1.91
CDH8-205ENST00000577730 LYPD5Q6UWN5 251 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 Q6ZTC4 211 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 TP53AIP1Q9HCN2 124 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 SDK1Q7Z5N4 2213 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.1□□□□□ -1.91
CDH8-205ENST00000577730 IGFL2Q6UWQ7 119 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 KNL1Q8NG31 2342 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 KIAA0100Q14667 2235 aaKnown RBP3.1□□□□□ -1.91
CDH8-205ENST00000577730 LTBP1Q14766 1721 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 ACYP2P14621 99 aa3.1□□□□□ -1.91
CDH8-205ENST00000577730 THSD7BQ9C0I4 1608 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms