RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 TIMM17BO60830 172 aa6.82□□□□□ -1.32
CDH8-203ENST00000577390 LINC00322Q6ZN03 302 aaPredicted RBP6.82□□□□□ -1.32
CDH8-203ENST00000577390 C10orf105Q8TEF2 133 aa6.82□□□□□ -1.32
CDH8-203ENST00000577390 TTTY13Q9BZ97 58 aa6.82□□□□□ -1.32
CDH8-203ENST00000577390 INAFM1C9JVW0 142 aa6.82□□□□□ -1.32
CDH8-203ENST00000577390 Q6P435 159 aa6.82□□□□□ -1.32
CDH8-203ENST00000577390 TRBV7-6A0A0J9YX20 115 aa6.82□□□□□ -1.32
CDH8-203ENST00000577390 TMEM14CQ9P0S9 112 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 FHL2Q14192 279 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 ESRGQ1W209 222 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 FOXL2NBQ6ZUU3 175 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 IGLV3-32A0A0A0MS00 114 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 PLAC8L1A1L4L8 177 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 COX6B2Q6YFQ2 88 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 ZNF295-AS1Q8N0V1 137 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
CDH8-203ENST00000577390 PDE6GP18545 87 aa6.8□□□□□ -1.32
CDH8-203ENST00000577390 C10orf25Q5T742 122 aa6.8□□□□□ -1.32
CDH8-203ENST00000577390 LINC01548A6NM66 108 aa6.8□□□□□ -1.32
CDH8-203ENST00000577390 C5orf56Q8N8D9 126 aa6.8□□□□□ -1.32
CDH8-203ENST00000577390 REG3AQ06141 175 aa6.8□□□□□ -1.32
CDH8-203ENST00000577390 MBD6Q96DN6 1003 aa6.8□□□□□ -1.32
CDH8-203ENST00000577390 DCANP1Q8TF63 244 aa6.8□□□□□ -1.32
CDH8-203ENST00000577390 TPSG1Q9NRR2 321 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 PRO0255Q9UI72 69 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 RPL37AP8A6NKH3 93 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 NCOR2Q9Y618 2525 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 K7EMT4 169 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 IGLV3-1P01715 115 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 POLQO75417 2590 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
CDH8-203ENST00000577390 TRBV7-7A0A0K0K1E9 115 aa6.78□□□□□ -1.32
CDH8-203ENST00000577390 CRIPAKQ8N1N5 446 aa6.78□□□□□ -1.32
CDH8-203ENST00000577390 RPL39LQ96EH5 51 aaKnown RBP6.78□□□□□ -1.32
CDH8-203ENST00000577390 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
CDH8-203ENST00000577390 C4orf3Q8WVX3 66 aa6.78□□□□□ -1.32
CDH8-203ENST00000577390 CLEC2BQ92478 149 aa6.78□□□□□ -1.32
CDH8-203ENST00000577390 U3KQK5 164 aa6.78□□□□□ -1.32
CDH8-203ENST00000577390 TMEM223A0PJW6 202 aa6.77□□□□□ -1.33
CDH8-203ENST00000577390 CCKP06307 115 aa6.77□□□□□ -1.33
CDH8-203ENST00000577390 NDUFC1O43677 76 aa6.77□□□□□ -1.33
CDH8-203ENST00000577390 WT1P19544 449 aaPredicted RBP6.77□□□□□ -1.33
CDH8-203ENST00000577390 PRO0461Q9UI25 63 aa6.77□□□□□ -1.33
CDH8-203ENST00000577390 SMIM26A0A096LP01 95 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 C19orf71A6NCJ1 209 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 MYCNOSP40205 109 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 AGPAT4-IT1Q9H0P7 198 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 IGHV6-1A0A0B4J1U7 121 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 P0C879 139 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 PIK3CD-AS1Q5SR53 167 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 MRPS12O15235 138 aaKnown RBP6.76□□□□□ -1.33
CDH8-203ENST00000577390 LOXL1Q08397 574 aaPredicted RBP6.76□□□□□ -1.33
CDH8-203ENST00000577390 RNF185Q96GF1 192 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 LOC100131303A0A0U1RQF7 123 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 POM121L12Q8N7R1 296 aa6.76□□□□□ -1.33
CDH8-203ENST00000577390 H3BUA1 57 aa6.75□□□□□ -1.33
CDH8-203ENST00000577390 FAM167A-AS1Q96KT0 104 aa6.75□□□□□ -1.33
CDH8-203ENST00000577390 SDIM1Q6ZPB5 146 aa6.75□□□□□ -1.33
CDH8-203ENST00000577390 FLVCR1-AS1Q8TAF5 88 aa6.75□□□□□ -1.33
CDH8-203ENST00000577390 RPL28P46779 137 aaKnown RBP6.75□□□□□ -1.33
CDH8-203ENST00000577390 C20orf197Q8N268 126 aa6.75□□□□□ -1.33
CDH8-203ENST00000577390 CTSZQ9UBR2 303 aa6.75□□□□□ -1.33
CDH8-203ENST00000577390 BLCAPP62952 87 aa6.74□□□□□ -1.33
CDH8-203ENST00000577390 ENHOQ6UWT2 76 aa6.74□□□□□ -1.33
CDH8-203ENST00000577390 DNAJC9-AS1A6NH13 148 aa6.74□□□□□ -1.33
CDH8-203ENST00000577390 NANOS2P60321 138 aaKnown RBP6.74□□□□□ -1.33
CDH8-203ENST00000577390 SNURFQ9Y675 71 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 hDV103S1A0JD37 113 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 CRYGAP11844 174 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 C7orf65Q6ZTY9 151 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 TOMM6Q96B49 74 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 NDUFA4L2Q9NRX3 87 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 COL4A5P29400 1685 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 LYRM9A8MSI8 78 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 H3BRN7 92 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 CHCHD10Q8WYQ3 142 aaPredicted RBP6.73□□□□□ -1.33
CDH8-203ENST00000577390 C4orf26Q17RF5 130 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 WFDC10AQ9H1F0 79 aa6.73□□□□□ -1.33
CDH8-203ENST00000577390 TRBV30A0A0K0K1B3 111 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 DAZAP2Q15038 168 aaPredicted RBP6.72□□□□□ -1.33
CDH8-203ENST00000577390 IGHV7-81A0A0B4J1V7 117 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 TRBV6-1A0A0K0K1D8 114 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 MIFP14174 115 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 TRIAP1O43715 76 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 SPTBN4Q9H254 2564 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 IGKV2D-30A0A075B6S6 120 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 IGKV2-30P06310 120 aa6.72□□□□□ -1.33
CDH8-203ENST00000577390 BRI3O95415 125 aa6.71□□□□□ -1.33
CDH8-203ENST00000577390 RPL39P62891 51 aaKnown RBP6.71□□□□□ -1.33
CDH8-203ENST00000577390 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.33
CDH8-203ENST00000577390 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.34
CDH8-203ENST00000577390 C1orf137Q5JT78 98 aa6.71□□□□□ -1.34
CDH8-203ENST00000577390 Q6ZQY7 126 aa6.71□□□□□ -1.34
CDH8-203ENST00000577390 C11orf86A6NJI1 115 aa6.71□□□□□ -1.34
CDH8-203ENST00000577390 SPRNQ5BIV9 151 aa6.71□□□□□ -1.34
CDH8-203ENST00000577390 LINC01556Q5JQF7 62 aa6.71□□□□□ -1.34
CDH8-203ENST00000577390 FAM229AH3BQW9 127 aa6.7□□□□□ -1.34
CDH8-203ENST00000577390 USP9XQ93008 2570 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms