RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 VAMP8Q9BV40 100 aa5.38□□□□□ -1.55
CCDC40-215ENST00000576033 TRAV12-1A0A0B4J245 112 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 CIDEAO60543 219 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 TSHBP01222 138 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 DDTP30046 118 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 UBE2D3P61077 147 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 UBE2D2P62837 147 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 ODF1Q14990 250 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 ATP6V0E2Q8NHE4 81 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 DNAJC30Q96LL9 226 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 PRO1933Q9H354 126 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 Q9H8V8 135 aa5.37□□□□□ -1.55
CCDC40-215ENST00000576033 IGIPA6NJ69 53 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 IGHV3-30P01768 117 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 IGHV3-33P01772 117 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 IGLC3P0DOY3 106 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 IGHV3-30-3P0DP02 117 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 IGHV3-30-5P0DP03 117 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 G0S2P27469 103 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 SPATA45Q537H7 98 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 C2orf66Q6UXQ4 117 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 MIEN1Q9BRT3 115 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
CCDC40-215ENST00000576033 TRBV10-1A0A0K0K1A3 114 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 I3L3M4 83 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 SIVA1O15304 175 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 FUSP35637 526 aaKnown RBP eCLIP5.35□□□□□ -1.55
CCDC40-215ENST00000576033 NTM-AS1Q6ZSK4 140 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 ERASQ7Z444 233 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 ATOH7Q8N100 152 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 TIMM17AQ99595 171 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 KIR2DL4Q99706 377 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 GTSF1LQ9H1H1 148 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 CYSLTR1Q9Y271 337 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 LRP1BQ9NZR2 4599 aa5.35□□□□□ -1.55
CCDC40-215ENST00000576033 TRBV7-3A0A075B6L6 115 aa5.34□□□□□ -1.55
CCDC40-215ENST00000576033 A0A087WX48 190 aa5.34□□□□□ -1.55
CCDC40-215ENST00000576033 RPL36AP83881 106 aaKnown RBP5.34□□□□□ -1.55
CCDC40-215ENST00000576033 LELP1Q5T871 98 aa5.34□□□□□ -1.55
CCDC40-215ENST00000576033 C20orf203Q8NBC4 194 aa5.34□□□□□ -1.55
CCDC40-215ENST00000576033 RPL36ALQ969Q0 106 aaKnown RBP5.34□□□□□ -1.55
CCDC40-215ENST00000576033 PMCHL2Q9BQD1 86 aa5.34□□□□□ -1.55
CCDC40-215ENST00000576033 hDV102S1A0JD36 115 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.33□□□□□ -1.56
CCDC40-215ENST00000576033 NPSP0C0P6 89 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 DNAH10OSP0CZ25 163 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 TNP2Q05952 138 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 DAZ4Q86SG3 579 aaKnown RBP5.33□□□□□ -1.56
CCDC40-215ENST00000576033 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
CCDC40-215ENST00000576033 BAALCQ8WXS3 180 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 FAM104AQ969W3 186 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 TMEM141Q96I45 108 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 C14orf144Q96I85 54 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 SCGB3A1Q96QR1 104 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 DAZ3Q9NR90 486 aaKnown RBP5.33□□□□□ -1.56
CCDC40-215ENST00000576033 UQCR10Q9UDW1 63 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 PYGO1Q9Y3Y4 419 aa5.33□□□□□ -1.56
CCDC40-215ENST00000576033 A0A1B0GVY2 172 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 PRSS29PA6NIE9 313 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 F8VRH5 84 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 RPL39P62891 51 aaKnown RBP5.32□□□□□ -1.56
CCDC40-215ENST00000576033 ANKRD39Q53RE8 183 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 MPV17L2Q567V2 206 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 C1orf134Q5TEV5 83 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 CLPSL2Q6UWE3 100 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 Q6ZRN7 208 aaPredicted RBP5.32□□□□□ -1.56
CCDC40-215ENST00000576033 C6orf223Q8N319 242 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 CHCHD7Q9BUK0 85 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 Q9HAA7 133 aa5.32□□□□□ -1.56
CCDC40-215ENST00000576033 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
CCDC40-215ENST00000576033 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
CCDC40-215ENST00000576033 TRBV6-8A0A0A6YYG3 113 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 H0Y8G0 127 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 DLEU1O43261 78 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 DPM2O94777 84 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 PRSS1P07477 247 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 COX8AP10176 69 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 FGF6P10767 208 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 PLNP26678 52 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 TIRAPP58753 221 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 GAGE6Q13070 117 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 LINC01556Q5JQF7 62 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 Q6ZN92 141 aa5.31□□□□□ -1.56
CCDC40-215ENST00000576033 IGLV4-69A0A075B6H9 119 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.3□□□□□ -1.56
CCDC40-215ENST00000576033 TRAV8-6A0A0B4J262 113 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 IGKV2-29A2NJV5 120 aaPredicted RBP5.3□□□□□ -1.56
CCDC40-215ENST00000576033 HSBP1L1C9JCN9 74 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 IGKCP01834 107 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 PMVKQ15126 192 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 TTC32Q5I0X7 151 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 SH2D6Q7Z4S9 175 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 AMELXQ99217 191 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 TIMM21Q9BVV7 248 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 SPANXA1Q9NS26 97 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 BIRC6Q9NR09 4857 aa5.3□□□□□ -1.56
CCDC40-215ENST00000576033 HSPG2P98160 4391 aa5.29□□□□□ -1.56
CCDC40-215ENST00000576033 DNAH8Q96JB1 4490 aa5.29□□□□□ -1.56
CCDC40-215ENST00000576033 IGLV4-3A0A075B6K6 122 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms