RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 CHCHD5Q9BSY4 110 aa13.35□□□□□ -0.27
SPNS3-203ENST00000575185 LAMTOR2Q9Y2Q5 125 aa13.35□□□□□ -0.27
SPNS3-203ENST00000575185 D6R8Y8 96 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 SMKR1H3BMG3 65 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 PANO1I0J062 215 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 VCYO14598 125 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 AMTP48728 403 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 ELOBQ15370 118 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 NTM-AS1Q6ZSK4 140 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 TMEM243Q9BU79 118 aa13.34□□□□□ -0.27
SPNS3-203ENST00000575185 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.34□□□□□ -0.27
SPNS3-203ENST00000575185 TRBV27A0A0K0K1C4 114 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 TMEM262E9PQX1 116 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 TCAPO15273 167 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 GAS8-AS1O95177 125 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 MT-ND6P03923 174 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 POLR2KP53803 58 aaKnown RBP13.33□□□□□ -0.28
SPNS3-203ENST00000575185 RPL32P62910 135 aaKnown RBP13.33□□□□□ -0.28
SPNS3-203ENST00000575185 C14orf177Q52M58 125 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 TMEM136Q6ZRR5 245 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 GNB1LQ9BYB4 327 aa13.33□□□□□ -0.28
SPNS3-203ENST00000575185 TNFRSF6BO95407 300 aa13.32□□□□□ -0.28
SPNS3-203ENST00000575185 APCSP02743 223 aa13.32□□□□□ -0.28
SPNS3-203ENST00000575185 ENHOQ6UWT2 76 aa13.32□□□□□ -0.28
SPNS3-203ENST00000575185 PRELID3AQ96N28 172 aa13.32□□□□□ -0.28
SPNS3-203ENST00000575185 C1orf43Q9BWL3 253 aa13.32□□□□□ -0.28
SPNS3-203ENST00000575185 USP17L23D6RBM5 183 aa13.31□□□□□ -0.28
SPNS3-203ENST00000575185 UBE2L6O14933 153 aa13.31□□□□□ -0.28
SPNS3-203ENST00000575185 KIR2DL4Q99706 377 aa13.31□□□□□ -0.28
SPNS3-203ENST00000575185 H7C423 109 aa13.3□□□□□ -0.28
SPNS3-203ENST00000575185 SMCO4Q9NRQ5 59 aa13.3□□□□□ -0.28
SPNS3-203ENST00000575185 PRSS1P07477 247 aa13.29□□□□□ -0.28
SPNS3-203ENST00000575185 FCER1GP30273 86 aa13.29□□□□□ -0.28
SPNS3-203ENST00000575185 Q0VG73 95 aa13.29□□□□□ -0.28
SPNS3-203ENST00000575185 NPYP01303 97 aa13.28□□□□□ -0.28
SPNS3-203ENST00000575185 SMAGPQ0VAQ4 97 aa13.27□□□□□ -0.29
SPNS3-203ENST00000575185 GAGE6Q13070 117 aa13.27□□□□□ -0.29
SPNS3-203ENST00000575185 MPV17L2Q567V2 206 aa13.27□□□□□ -0.29
SPNS3-203ENST00000575185 Q6ZRU5 148 aa13.27□□□□□ -0.29
SPNS3-203ENST00000575185 SMIM2Q9BVW6 85 aa13.27□□□□□ -0.29
SPNS3-203ENST00000575185 MAP1LC3AQ9H492 121 aa13.27□□□□□ -0.29
SPNS3-203ENST00000575185 TGIF2-C20orf24A0A0A6YYL0 155 aa13.26□□□□□ -0.29
SPNS3-203ENST00000575185 TSHBP01222 138 aa13.26□□□□□ -0.29
SPNS3-203ENST00000575185 CRPP02741 224 aa13.26□□□□□ -0.29
SPNS3-203ENST00000575185 C9orf163Q8N9P6 203 aa13.26□□□□□ -0.29
SPNS3-203ENST00000575185 A0A1B0GUV1 79 aa13.25□□□□□ -0.29
SPNS3-203ENST00000575185 PRSS47A8MTI9 375 aa13.25□□□□□ -0.29
SPNS3-203ENST00000575185 ANGP03950 147 aaKnown RBP13.24□□□□□ -0.29
SPNS3-203ENST00000575185 RBX1P62877 108 aa13.24□□□□□ -0.29
SPNS3-203ENST00000575185 AMMECR1LQ6DCA0 310 aa13.24□□□□□ -0.29
SPNS3-203ENST00000575185 TMEM18Q96B42 140 aa13.24□□□□□ -0.29
SPNS3-203ENST00000575185 MRPL18Q9H0U6 180 aaKnown RBP13.24□□□□□ -0.29
SPNS3-203ENST00000575185 ESDP10768 282 aa13.23□□□□□ -0.29
SPNS3-203ENST00000575185 ZNF25P17030 456 aaPredicted RBP13.23□□□□□ -0.29
SPNS3-203ENST00000575185 RAB5AP20339 215 aa13.23□□□□□ -0.29
SPNS3-203ENST00000575185 ODF1Q14990 250 aa13.23□□□□□ -0.29
SPNS3-203ENST00000575185 DGAT2L7PQ6IED9 249 aa13.23□□□□□ -0.29
SPNS3-203ENST00000575185 TRAPPC1Q9Y5R8 145 aa13.23□□□□□ -0.29
SPNS3-203ENST00000575185 FABP9Q0Z7S8 132 aa13.22□□□□□ -0.29
SPNS3-203ENST00000575185 CLPSL2Q6UWE3 100 aa13.22□□□□□ -0.29
SPNS3-203ENST00000575185 SDIM1Q6ZPB5 146 aa13.22□□□□□ -0.29
SPNS3-203ENST00000575185 K7EMI3 77 aa13.21□□□□□ -0.29
SPNS3-203ENST00000575185 KIAA1644Q3SXP7 199 aa13.21□□□□□ -0.29
SPNS3-203ENST00000575185 YPEL4Q96NS1 127 aa13.21□□□□□ -0.29
SPNS3-203ENST00000575185 NXT2Q9NPJ8 142 aaKnown RBP13.21□□□□□ -0.29
SPNS3-203ENST00000575185 KRTAP26-1Q6PEX3 210 aa13.2□□□□□ -0.3
SPNS3-203ENST00000575185 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
SPNS3-203ENST00000575185 Q8N8P6 123 aa13.2□□□□□ -0.3
SPNS3-203ENST00000575185 TMEM101Q96IK0 257 aa13.2□□□□□ -0.3
SPNS3-203ENST00000575185 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.19□□□□□ -0.3
SPNS3-203ENST00000575185 LOC389332A0A1B0GUA5 103 aa13.19□□□□□ -0.3
SPNS3-203ENST00000575185 IGKV2-29A2NJV5 120 aaPredicted RBP13.19□□□□□ -0.3
SPNS3-203ENST00000575185 FGF6P10767 208 aa13.19□□□□□ -0.3
SPNS3-203ENST00000575185 RNASEKQ6P5S7 137 aaKnown RBP13.19□□□□□ -0.3
SPNS3-203ENST00000575185 MIAQ16674 131 aa13.18□□□□□ -0.3
SPNS3-203ENST00000575185 MRPL52Q86TS9 123 aaKnown RBP13.18□□□□□ -0.3
SPNS3-203ENST00000575185 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
SPNS3-203ENST00000575185 CHTF8P0CG12 524 aa13.17□□□□□ -0.3
SPNS3-203ENST00000575185 G0S2P27469 103 aa13.17□□□□□ -0.3
SPNS3-203ENST00000575185 CIRBPQ14011 172 aaKnown RBP13.17□□□□□ -0.3
SPNS3-203ENST00000575185 C20orf203Q8NBC4 194 aa13.17□□□□□ -0.3
SPNS3-203ENST00000575185 PRR34Q9NV39 138 aa13.17□□□□□ -0.3
SPNS3-203ENST00000575185 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
SPNS3-203ENST00000575185 LINC00269Q8N2A0 174 aa13.16□□□□□ -0.3
SPNS3-203ENST00000575185 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
SPNS3-203ENST00000575185 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
SPNS3-203ENST00000575185 REG3AQ06141 175 aa13.15□□□□□ -0.3
SPNS3-203ENST00000575185 PRSS3P2Q8NHM4 247 aa13.15□□□□□ -0.3
SPNS3-203ENST00000575185 TIMM21Q9BVV7 248 aa13.15□□□□□ -0.3
SPNS3-203ENST00000575185 CSDC2Q9Y534 153 aaKnown RBP13.15□□□□□ -0.3
SPNS3-203ENST00000575185 TRAV8-4A0A0B4J246 113 aa13.14□□□□□ -0.31
SPNS3-203ENST00000575185 A0A087WYN8 130 aa13.13□□□□□ -0.31
SPNS3-203ENST00000575185 S100A1P23297 94 aa13.13□□□□□ -0.31
SPNS3-203ENST00000575185 SPANXA1Q9NS26 97 aa13.13□□□□□ -0.31
SPNS3-203ENST00000575185 IFI27P40305 119 aaPredicted RBP13.12□□□□□ -0.31
SPNS3-203ENST00000575185 UBE2D4Q9Y2X8 147 aa13.12□□□□□ -0.31
SPNS3-203ENST00000575185 IGLV10-54A0A075B6I4 117 aa13.11□□□□□ -0.31
SPNS3-203ENST00000575185 CNBPP62633 177 aaKnown RBP13.11□□□□□ -0.31
SPNS3-203ENST00000575185 hDV102S1A0JD36 115 aa13.1□□□□□ -0.31
SPNS3-203ENST00000575185 LINC01549A6NIU2 74 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms