RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 CDK2AP2O75956 126 aa6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 PLNP26678 52 aa6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 NFE4Q86UQ8 179 aa6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 MAPKAPK5-AS1Q8N8E1 139 aa6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 PTH2Q96A98 100 aa6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 RPL39LQ96EH5 51 aaKnown RBP6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 CYSLTR1Q9Y271 337 aa6.59□□□□□ -1.35
NPLOC4-216ENST00000574344 IGHV3-73A0A0B4J1V6 119 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 TRBV6-5A0A0K0K1A5 114 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 hDV102S1A0JD36 115 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 DPM2O94777 84 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 GAS8-AS1O95177 125 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 SH2D6Q7Z4S9 175 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 SCGB3A1Q96QR1 104 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 PRADC1Q9BSG0 188 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 TNFRSF18Q9Y5U5 241 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 KIF25-AS1Q9Y6Z4 181 aa6.58□□□□□ -1.36
NPLOC4-216ENST00000574344 IGKCP01834 107 aa6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 CRYGDP07320 174 aa6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 RHOHQ15669 191 aa6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 CFAP126Q5VTH2 177 aa6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 Q6ZRN7 208 aaPredicted RBP6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 TOMM6Q96B49 74 aa6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 C2orf88Q9BSF0 95 aa6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 RYR1P21817 5038 aa6.57□□□□□ -1.36
NPLOC4-216ENST00000574344 TRAV12-1A0A0B4J245 112 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 SDHAF1A6NFY7 115 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 RS1O15537 224 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 DNAH10OSP0CZ25 163 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 BATFQ16520 125 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 MAJINQ3KP22 176 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 TMEM97Q5BJF2 176 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 C2orf66Q6UXQ4 117 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 C10orf126Q8N4M7 172 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 PCLOQ9Y6V0 5065 aa6.56□□□□□ -1.36
NPLOC4-216ENST00000574344 LRP1BQ9NZR2 4599 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 TRAV8-6A0A0B4J262 113 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 IGHV3-38A0A0C4DH36 116 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 TRBV27A0A0K0K1C4 114 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 I3L3M4 83 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 K7EP13 123 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 PSCAO43653 123 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 CIDEAO60543 219 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 ODF1Q14990 250 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 PAPPA-AS1Q5QFB9 102 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 COL5A1-AS1Q5SY13 56 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 TMEM141Q96I45 108 aa6.55□□□□□ -1.36
NPLOC4-216ENST00000574344 A0A087WX48 190 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 TRBV6-4A0A1B0GX49 114 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 F8VRH5 84 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 M0QY20 66 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 COX8AP10176 69 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 FUSP35637 526 aaKnown RBP eCLIP6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 ZFP2Q6ZN57 461 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 ERASQ7Z444 233 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 SNHG12Q9BXW3 62 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 JPT2Q9H910 190 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 PGPEP1Q9NXJ5 209 aa6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 CHTOPQ9Y3Y2 248 aaKnown RBP6.54□□□□□ -1.36
NPLOC4-216ENST00000574344 HSPG2P98160 4391 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 A0A087WTM6 91 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 IGHV3-30P01768 117 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 IGHV3-33P01772 117 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 IGHV3-30-3P0DP02 117 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 IGHV3-30-5P0DP03 117 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 NMUP48645 174 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 POLR2KP53803 58 aaKnown RBP6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 TIRAPP58753 221 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 HERVK_113P61574 105 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 ATP6V0E2Q8NHE4 81 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 Q9HAA7 133 aa6.53□□□□□ -1.36
NPLOC4-216ENST00000574344 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 GAGE12JA6NER3 117 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 SMAGPQ0VAQ4 97 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 GAGE1Q13065 139 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 GAGE4Q13068 117 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 GAGE5Q13069 117 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 GAGE13Q4V321 117 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 LINC01556Q5JQF7 62 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 LELP1Q5T871 98 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 Q8N1X5 172 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 GTSF1LQ9H1H1 148 aa6.52□□□□□ -1.37
NPLOC4-216ENST00000574344 DLEU1O43261 78 aa6.51□□□□□ -1.37
NPLOC4-216ENST00000574344 PMVKQ15126 192 aa6.51□□□□□ -1.37
NPLOC4-216ENST00000574344 ZC2HC1BQ5TFG8 222 aa6.51□□□□□ -1.37
NPLOC4-216ENST00000574344 BAALCQ8WXS3 180 aa6.51□□□□□ -1.37
NPLOC4-216ENST00000574344 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
NPLOC4-216ENST00000574344 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
NPLOC4-216ENST00000574344 ANKRD39Q53RE8 183 aa6.5□□□□□ -1.37
NPLOC4-216ENST00000574344 NEXN-AS1Q8NBZ9 246 aa6.5□□□□□ -1.37
NPLOC4-216ENST00000574344 ABCA13Q86UQ4 5058 aa6.5□□□□□ -1.37
NPLOC4-216ENST00000574344 TRBV10-1A0A0K0K1A3 114 aa6.49□□□□□ -1.37
NPLOC4-216ENST00000574344 A0A1B0GV90 55 aa6.49□□□□□ -1.37
NPLOC4-216ENST00000574344 IBA57-AS1B1ANH7 110 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms