RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 CDC42SE2Q9NRR3 84 aa10.5□□□□□ -0.73
CCNE1-204ENST00000574121 CYSLTR1Q9Y271 337 aa10.5□□□□□ -0.73
CCNE1-204ENST00000574121 RYR3Q15413 4870 aa10.49□□□□□ -0.73
CCNE1-204ENST00000574121 RPL39P62891 51 aaKnown RBP10.49□□□□□ -0.73
CCNE1-204ENST00000574121 FA2HQ7L5A8 372 aa10.49□□□□□ -0.73
CCNE1-204ENST00000574121 ZNF664Q8N3J9 261 aa10.49□□□□□ -0.73
CCNE1-204ENST00000574121 PYGO1Q9Y3Y4 419 aa10.49□□□□□ -0.73
CCNE1-204ENST00000574121 IGKV2D-24A0A075B6R9 120 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 TRGC2P03986 189 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 NPSP0C0P6 89 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 RAB5BP61020 215 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
CCNE1-204ENST00000574121 TNP2Q05952 138 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 CLPSL2Q6UWE3 100 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 C2orf66Q6UXQ4 117 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 AP5S1Q9NUS5 200 aa10.48□□□□□ -0.73
CCNE1-204ENST00000574121 EREGO14944 169 aa10.45□□□□□ -0.74
CCNE1-204ENST00000574121 CCL25O15444 150 aa10.45□□□□□ -0.74
CCNE1-204ENST00000574121 LINC00614P0C842 121 aa10.45□□□□□ -0.74
CCNE1-204ENST00000574121 TOMM6Q96B49 74 aa10.45□□□□□ -0.74
CCNE1-204ENST00000574121 Q6ZUT4 128 aa10.44□□□□□ -0.74
CCNE1-204ENST00000574121 A0A087WTM6 91 aa10.43□□□□□ -0.74
CCNE1-204ENST00000574121 LINC00959A0A1B0GUT2 108 aa10.43□□□□□ -0.74
CCNE1-204ENST00000574121 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
CCNE1-204ENST00000574121 PAPPA-AS1Q5QFB9 102 aa10.43□□□□□ -0.74
CCNE1-204ENST00000574121 KRTAP26-1Q6PEX3 210 aa10.43□□□□□ -0.74
CCNE1-204ENST00000574121 URB1-AS1Q96HZ7 61 aa10.43□□□□□ -0.74
CCNE1-204ENST00000574121 TIMM17AQ99595 171 aa10.43□□□□□ -0.74
CCNE1-204ENST00000574121 IGLV10-54A0A075B6I4 117 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 IGLV4-3A0A075B6K6 122 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 IGKV3OR2-268A0A0C4DH90 116 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 A0A1B0GVY2 172 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 SS18Q15532 418 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 Q6ZN92 141 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 ERASQ7Z444 233 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 MAPKAPK5-AS1Q8N8E1 139 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 CHCHD1Q96BP2 118 aaKnown RBP10.42□□□□□ -0.74
CCNE1-204ENST00000574121 TMEM141Q96I45 108 aa10.42□□□□□ -0.74
CCNE1-204ENST00000574121 C1orf196B1AJZ1 125 aa10.41□□□□□ -0.74
CCNE1-204ENST00000574121 CHCHD10Q8WYQ3 142 aaPredicted RBP10.41□□□□□ -0.74
CCNE1-204ENST00000574121 RNASE13Q5GAN3 156 aaKnown RBP10.4□□□□□ -0.74
CCNE1-204ENST00000574121 TEX43Q6ZNM6 134 aa10.4□□□□□ -0.74
CCNE1-204ENST00000574121 BAGE3Q86Y29 109 aa10.4□□□□□ -0.74
CCNE1-204ENST00000574121 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.74
CCNE1-204ENST00000574121 OPRPNQ99935 248 aaPredicted RBP10.4□□□□□ -0.74
CCNE1-204ENST00000574121 HBDP02042 147 aa10.39□□□□□ -0.75
CCNE1-204ENST00000574121 A0A096LNJ9 63 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 TRAV13-1A0A0B4J241 112 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 IFITM10A6NMD0 228 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 C14orf177Q52M58 125 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 CD164L2Q6UWJ8 174 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 BAALCQ8WXS3 180 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 AMELXQ99217 191 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 C2orf88Q9BSF0 95 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 VCX2Q9H322 139 aa10.38□□□□□ -0.75
CCNE1-204ENST00000574121 GAGE12HA6NDE8 117 aa10.37□□□□□ -0.75
CCNE1-204ENST00000574121 XCL1P47992 114 aa10.37□□□□□ -0.75
CCNE1-204ENST00000574121 CDPF1Q6NVV7 123 aa10.37□□□□□ -0.75
CCNE1-204ENST00000574121 Q8N814 137 aa10.37□□□□□ -0.75
CCNE1-204ENST00000574121 NTN5Q8WTR8 489 aaPredicted RBP10.37□□□□□ -0.75
CCNE1-204ENST00000574121 PGPEP1Q9NXJ5 209 aa10.37□□□□□ -0.75
CCNE1-204ENST00000574121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
CCNE1-204ENST00000574121 HSBP1O75506 76 aa10.36□□□□□ -0.75
CCNE1-204ENST00000574121 FOXI1Q12951 378 aa10.36□□□□□ -0.75
CCNE1-204ENST00000574121 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BKO60814 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BJP06899 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BOP23527 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BBP33778 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BDP58876 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BCP62807 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 WFDC2Q14508 124 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST2H2BEQ16778 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 PDZD11Q5EBL8 140 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.35□□□□□ -0.75
CCNE1-204ENST00000574121 CFAP161Q6P656 301 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 LINC00173Q6ZV60 143 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BHQ93079 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BNQ99877 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 HIST1H2BMQ99879 126 aa10.35□□□□□ -0.75
CCNE1-204ENST00000574121 LECT2O14960 151 aa10.34□□□□□ -0.75
CCNE1-204ENST00000574121 SERF1AO75920 110 aa10.34□□□□□ -0.75
CCNE1-204ENST00000574121 ATP5LO75964 103 aa10.34□□□□□ -0.75
CCNE1-204ENST00000574121 UBE2D1P51668 147 aa10.34□□□□□ -0.75
CCNE1-204ENST00000574121 PMCHL1Q16048 86 aa10.34□□□□□ -0.75
CCNE1-204ENST00000574121 SPATA12Q7Z6I5 190 aa10.34□□□□□ -0.75
CCNE1-204ENST00000574121 DNAH2Q9P225 4427 aa10.34□□□□□ -0.75
CCNE1-204ENST00000574121 SEC11AP67812 179 aa10.33□□□□□ -0.76
CCNE1-204ENST00000574121 FAM19A3Q7Z5A8 133 aa10.33□□□□□ -0.76
CCNE1-204ENST00000574121 IGHV3OR16-9A0A0B4J2B5 98 aa10.32□□□□□ -0.76
CCNE1-204ENST00000574121 COX7A2LO14548 114 aa10.32□□□□□ -0.76
CCNE1-204ENST00000574121 LINC00310P59036 64 aa10.32□□□□□ -0.76
CCNE1-204ENST00000574121 KRTAP10-2P60368 255 aa10.32□□□□□ -0.76
CCNE1-204ENST00000574121 LINC00242Q5T6M2 205 aa10.32□□□□□ -0.76
CCNE1-204ENST00000574121 PMVKQ15126 192 aa10.31□□□□□ -0.76
CCNE1-204ENST00000574121 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
CCNE1-204ENST00000574121 FRAS1Q86XX4 4008 aa10.3□□□□□ -0.76
CCNE1-204ENST00000574121 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms