RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 IMUPQ9GZP8 106 aa11.75□□□□□ -0.53
USP43-204ENST00000573955 DPH3P1Q9H4G8 78 aa11.75□□□□□ -0.53
USP43-204ENST00000573955 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
USP43-204ENST00000573955 ZNF815PA8K554 130 aa11.74□□□□□ -0.53
USP43-204ENST00000573955 CCL24O00175 119 aa11.74□□□□□ -0.53
USP43-204ENST00000573955 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
USP43-204ENST00000573955 PRM2P04554 102 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 RNASE1P07998 156 aaKnown RBP11.73□□□□□ -0.53
USP43-204ENST00000573955 SEC61GP60059 68 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 DEFB114Q30KQ6 69 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 Q8N8P6 123 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 PRO1854Q9UHT4 67 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 FAM240AA0A1B0GVK7 77 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 CFC1BP0CG36 223 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 CFC1P0CG37 223 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 RBMY1A1P0DJD3 496 aaKnown RBP11.73□□□□□ -0.53
USP43-204ENST00000573955 RBMY1CP0DJD4 496 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 MED14OSP0DP75 135 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 RBMY1FQ15415 496 aaKnown RBP11.73□□□□□ -0.53
USP43-204ENST00000573955 FAM74A4Q5TZK3 123 aa11.73□□□□□ -0.53
USP43-204ENST00000573955 IGLV2-18A0A075B6J9 118 aa11.72□□□□□ -0.53
USP43-204ENST00000573955 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
USP43-204ENST00000573955 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
USP43-204ENST00000573955 IGHV3-16A0A0C4DH30 117 aa11.72□□□□□ -0.53
USP43-204ENST00000573955 RBMY1BA6NDE4 496 aaKnown RBP11.72□□□□□ -0.53
USP43-204ENST00000573955 RBMY1EA6NEQ0 496 aaKnown RBP11.72□□□□□ -0.53
USP43-204ENST00000573955 ATP5G1P05496 136 aa11.72□□□□□ -0.53
USP43-204ENST00000573955 RBMY1DP0C7P1 496 aaKnown RBP11.72□□□□□ -0.53
USP43-204ENST00000573955 COX7CP15954 63 aa11.72□□□□□ -0.53
USP43-204ENST00000573955 LINC01620Q4KN68 170 aa11.72□□□□□ -0.53
USP43-204ENST00000573955 ZNF256Q9Y2P7 627 aaPredicted RBP11.72□□□□□ -0.53
USP43-204ENST00000573955 CRYGDP07320 174 aa11.71□□□□□ -0.53
USP43-204ENST00000573955 CRYGAP11844 174 aa11.71□□□□□ -0.53
USP43-204ENST00000573955 ATXN8Q156A1 80 aa11.71□□□□□ -0.53
USP43-204ENST00000573955 PLEKHB2Q96CS7 222 aa11.71□□□□□ -0.53
USP43-204ENST00000573955 DPH3Q96FX2 82 aa11.71□□□□□ -0.53
USP43-204ENST00000573955 F5H697 171 aa11.71□□□□□ -0.54
USP43-204ENST00000573955 H7C1H1 209 aa11.71□□□□□ -0.54
USP43-204ENST00000573955 F8VRH5 84 aa11.7□□□□□ -0.54
USP43-204ENST00000573955 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
USP43-204ENST00000573955 TRACP01848 142 aa11.7□□□□□ -0.54
USP43-204ENST00000573955 TRBV10-2A0A0K0K1G8 114 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 HILS1P60008 231 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 NSUN5P1Q3KNT7 163 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 Q5XG85 94 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 SUMO2P61956 95 aaKnown RBP11.69□□□□□ -0.54
USP43-204ENST00000573955 LAGE3Q14657 143 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 SMIM2Q9BVW6 85 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 PRO0628Q9UI54 55 aa11.69□□□□□ -0.54
USP43-204ENST00000573955 NXPH4O95158 308 aa11.68□□□□□ -0.54
USP43-204ENST00000573955 MALP21145 153 aa11.68□□□□□ -0.54
USP43-204ENST00000573955 C1orf43Q9BWL3 253 aa11.68□□□□□ -0.54
USP43-204ENST00000573955 C9orf85Q96MD7 179 aa11.68□□□□□ -0.54
USP43-204ENST00000573955 KIF25-AS1Q9Y6Z4 181 aa11.68□□□□□ -0.54
USP43-204ENST00000573955 P0DMU3 169 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 LINC00315P59091 139 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 TINCRA0A1B0GVN0 87 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 TMEM258P61165 79 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 HERVK_113P61574 105 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 SUMO4Q6EEV6 95 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 C16orf95Q9H693 158 aa11.67□□□□□ -0.54
USP43-204ENST00000573955 C2orf82Q6UX34 121 aa11.66□□□□□ -0.54
USP43-204ENST00000573955 TRRAPQ9Y4A5 3859 aa11.66□□□□□ -0.54
USP43-204ENST00000573955 hADV29S1A0JD25 119 aa11.66□□□□□ -0.54
USP43-204ENST00000573955 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
USP43-204ENST00000573955 ZNF876PQ49A33 203 aa11.66□□□□□ -0.54
USP43-204ENST00000573955 TRAV12-1A0A0B4J245 112 aa11.65□□□□□ -0.54
USP43-204ENST00000573955 TMEM170BQ5T4T1 132 aa11.65□□□□□ -0.54
USP43-204ENST00000573955 H7C2G1 150 aa11.64□□□□□ -0.55
USP43-204ENST00000573955 IGHV3-73A0A0B4J1V6 119 aa11.64□□□□□ -0.55
USP43-204ENST00000573955 OXTP01178 125 aa11.64□□□□□ -0.55
USP43-204ENST00000573955 IGHV3-30P01768 117 aa11.63□□□□□ -0.55
USP43-204ENST00000573955 IGHV3-30-5P0DP03 117 aa11.63□□□□□ -0.55
USP43-204ENST00000573955 XCL2Q9UBD3 114 aa11.63□□□□□ -0.55
USP43-204ENST00000573955 MAST4O15021 2626 aa11.63□□□□□ -0.55
USP43-204ENST00000573955 IGHV3OR16-12A0A075B7B8 117 aa11.63□□□□□ -0.55
USP43-204ENST00000573955 A0A0J9YY99 117 aa11.63□□□□□ -0.55
USP43-204ENST00000573955 ZNF22P17026 224 aaPredicted RBP11.63□□□□□ -0.55
USP43-204ENST00000573955 IGHV3-33P01772 117 aa11.62□□□□□ -0.55
USP43-204ENST00000573955 Q1RN00 199 aa11.62□□□□□ -0.55
USP43-204ENST00000573955 DSCR8Q96T75 97 aa11.62□□□□□ -0.55
USP43-204ENST00000573955 C2orf48Q96LS8 159 aa11.62□□□□□ -0.55
USP43-204ENST00000573955 PROK1P58294 105 aa11.61□□□□□ -0.55
USP43-204ENST00000573955 STHQ8IWL8 128 aa11.61□□□□□ -0.55
USP43-204ENST00000573955 WFDC10AQ9H1F0 79 aa11.61□□□□□ -0.55
USP43-204ENST00000573955 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
USP43-204ENST00000573955 A8MTW9 85 aa11.6□□□□□ -0.55
USP43-204ENST00000573955 ADARB2-AS1A8MUL3 147 aa11.6□□□□□ -0.55
USP43-204ENST00000573955 RPL35AP18077 110 aaKnown RBP11.6□□□□□ -0.55
USP43-204ENST00000573955 H3BT86 120 aa11.6□□□□□ -0.55
USP43-204ENST00000573955 RS1O15537 224 aa11.6□□□□□ -0.55
USP43-204ENST00000573955 KRTAP10-3P60369 221 aa11.6□□□□□ -0.55
USP43-204ENST00000573955 ORMDL2Q53FV1 153 aa11.6□□□□□ -0.55
USP43-204ENST00000573955 ACYP1P07311 99 aa11.59□□□□□ -0.55
USP43-204ENST00000573955 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
USP43-204ENST00000573955 PKIGQ9Y2B9 76 aa11.59□□□□□ -0.55
USP43-204ENST00000573955 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms