RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.48
CACNA1A-202ENST00000573710 IGFL3Q6UXB1 125 aa12.02□□□□□ -0.49
CACNA1A-202ENST00000573710 C10orf25Q5T742 122 aa12.02□□□□□ -0.49
CACNA1A-202ENST00000573710 NDUFA11Q86Y39 141 aa12.02□□□□□ -0.49
CACNA1A-202ENST00000573710 NOTCH4Q99466 2003 aa12.02□□□□□ -0.49
CACNA1A-202ENST00000573710 MIAQ16674 131 aa12.02□□□□□ -0.49
CACNA1A-202ENST00000573710 IGLV8-61A0A075B6I0 122 aa12.01□□□□□ -0.49
CACNA1A-202ENST00000573710 Q6ZS49 121 aa12□□□□□ -0.49
CACNA1A-202ENST00000573710 UQCRQO14949 82 aa12□□□□□ -0.49
CACNA1A-202ENST00000573710 ZNF706Q9Y5V0 76 aaPredicted RBP12□□□□□ -0.49
CACNA1A-202ENST00000573710 SPANXB1Q9NS25 103 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-202ENST00000573710 FSHBP01225 129 aa11.99□□□□□ -0.49
CACNA1A-202ENST00000573710 C6orf99Q4VX62 202 aa11.99□□□□□ -0.49
CACNA1A-202ENST00000573710 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-202ENST00000573710 E9PLD3 99 aa11.98□□□□□ -0.49
CACNA1A-202ENST00000573710 KIAA1549LQ6ZVL6 1849 aa11.98□□□□□ -0.49
CACNA1A-202ENST00000573710 LENEPQ9Y5L5 61 aa11.98□□□□□ -0.49
CACNA1A-202ENST00000573710 K7EIM0 57 aa11.98□□□□□ -0.49
CACNA1A-202ENST00000573710 LINC00208Q96KT6 92 aa11.98□□□□□ -0.49
CACNA1A-202ENST00000573710 ADORA2A-AS1P86434 159 aa11.98□□□□□ -0.49
CACNA1A-202ENST00000573710 EBI3Q14213 229 aa11.98□□□□□ -0.49
CACNA1A-202ENST00000573710 ZNF73O43830 326 aaPredicted RBP11.97□□□□□ -0.49
CACNA1A-202ENST00000573710 IGLV1-44P01699 117 aa11.97□□□□□ -0.49
CACNA1A-202ENST00000573710 I3L2K1 104 aa11.97□□□□□ -0.49
CACNA1A-202ENST00000573710 ZNF843Q8N446 348 aa11.97□□□□□ -0.49
CACNA1A-202ENST00000573710 PATE2Q6UY27 113 aa11.97□□□□□ -0.49
CACNA1A-202ENST00000573710 Q9UF83 564 aa11.97□□□□□ -0.49
CACNA1A-202ENST00000573710 TRBV6-5A0A0K0K1A5 114 aa11.96□□□□□ -0.49
CACNA1A-202ENST00000573710 IGLV11-55A0A075B6I3 123 aa11.96□□□□□ -0.49
CACNA1A-202ENST00000573710 Q6ZQY7 126 aa11.96□□□□□ -0.5
CACNA1A-202ENST00000573710 CLUHP3Q96NS8 147 aa11.96□□□□□ -0.5
CACNA1A-202ENST00000573710 TTC28Q96AY4 2481 aa11.96□□□□□ -0.5
CACNA1A-202ENST00000573710 FOXL2NBQ6ZUU3 175 aa11.96□□□□□ -0.5
CACNA1A-202ENST00000573710 ALPK3Q96L96 1907 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 SYCNQ0VAF6 134 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 DAZAP2Q15038 168 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 PTPRSQ13332 1948 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 NUPR1O60356 82 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 Q8N976 141 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 LINC00337Q8N6G1 96 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 CFAP126Q5VTH2 177 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 C7orf65Q6ZTY9 151 aa11.95□□□□□ -0.5
CACNA1A-202ENST00000573710 IGKV2D-30A0A075B6S6 120 aa11.94□□□□□ -0.5
CACNA1A-202ENST00000573710 IGLV5-52A0A0A0MRZ9 124 aa11.94□□□□□ -0.5
CACNA1A-202ENST00000573710 IGKV2-30P06310 120 aa11.94□□□□□ -0.5
CACNA1A-202ENST00000573710 PROK1P58294 105 aa11.94□□□□□ -0.5
CACNA1A-202ENST00000573710 A0A0J9YXY3 114 aa11.94□□□□□ -0.5
CACNA1A-202ENST00000573710 SIP14410 1827 aa11.93□□□□□ -0.5
CACNA1A-202ENST00000573710 TRAV10A0A0B4J240 114 aa11.93□□□□□ -0.5
CACNA1A-202ENST00000573710 LINC00322Q6ZN03 302 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-202ENST00000573710 LINC01547P58512 204 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-202ENST00000573710 KPRPQ5T749 579 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-202ENST00000573710 BBC3Q96PG8 261 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-202ENST00000573710 C17orf82Q86X59 251 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-202ENST00000573710 RNASE3P12724 160 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-202ENST00000573710 LY6G6DO95868 133 aa11.92□□□□□ -0.5
CACNA1A-202ENST00000573710 ADAMTS20P59510 1910 aa11.91□□□□□ -0.5
CACNA1A-202ENST00000573710 A8MZ25 164 aa11.91□□□□□ -0.5
CACNA1A-202ENST00000573710 LINC01556Q5JQF7 62 aa11.91□□□□□ -0.5
CACNA1A-202ENST00000573710 C20orf173Q96LM9 149 aa11.91□□□□□ -0.5
CACNA1A-202ENST00000573710 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
CACNA1A-202ENST00000573710 C11orf53Q8IXP5 236 aa11.9□□□□□ -0.5
CACNA1A-202ENST00000573710 LYRM9A8MSI8 78 aa11.9□□□□□ -0.5
CACNA1A-202ENST00000573710 PRM2P04554 102 aa11.89□□□□□ -0.51
CACNA1A-202ENST00000573710 SRCAPQ6ZRS2 3230 aa11.89□□□□□ -0.51
CACNA1A-202ENST00000573710 SHISA2Q6UWI4 295 aa11.89□□□□□ -0.51
CACNA1A-202ENST00000573710 HIVEP3Q5T1R4 2406 aa11.89□□□□□ -0.51
CACNA1A-202ENST00000573710 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
CACNA1A-202ENST00000573710 A0A0J9YX75 114 aa11.88□□□□□ -0.51
CACNA1A-202ENST00000573710 TNFRSF13BO14836 293 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-202ENST00000573710 NDUFC1O43677 76 aa11.87□□□□□ -0.51
CACNA1A-202ENST00000573710 SPAG11AQ6PDA7 123 aa11.87□□□□□ -0.51
CACNA1A-202ENST00000573710 MYO9AB2RTY4 2548 aa11.87□□□□□ -0.51
CACNA1A-202ENST00000573710 OXLD1Q5BKU9 147 aa11.86□□□□□ -0.51
CACNA1A-202ENST00000573710 LINC01548A6NM66 108 aa11.86□□□□□ -0.51
CACNA1A-202ENST00000573710 K7EMT4 169 aa11.86□□□□□ -0.51
CACNA1A-202ENST00000573710 TRIAP1O43715 76 aa11.86□□□□□ -0.51
CACNA1A-202ENST00000573710 U3KQA8 63 aa11.86□□□□□ -0.51
CACNA1A-202ENST00000573710 C2CD3Q4AC94 2353 aa11.86□□□□□ -0.51
CACNA1A-202ENST00000573710 LOC107984640A0A0U1RRK4 108 aa11.85□□□□□ -0.51
CACNA1A-202ENST00000573710 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
CACNA1A-202ENST00000573710 C1orf137Q5JT78 98 aa11.85□□□□□ -0.51
CACNA1A-202ENST00000573710 E7EUB6 86 aa11.85□□□□□ -0.51
CACNA1A-202ENST00000573710 ATP5EP56381 51 aaPredicted RBP11.85□□□□□ -0.51
CACNA1A-202ENST00000573710 M0QXV9 152 aa11.85□□□□□ -0.51
CACNA1A-202ENST00000573710 PLA2G2CQ5R387 149 aa11.84□□□□□ -0.51
CACNA1A-202ENST00000573710 ACYP2P14621 99 aa11.84□□□□□ -0.51
CACNA1A-202ENST00000573710 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
CACNA1A-202ENST00000573710 MSMPQ1L6U9 139 aa11.84□□□□□ -0.51
CACNA1A-202ENST00000573710 MUC6Q6W4X9 2439 aa11.84□□□□□ -0.51
CACNA1A-202ENST00000573710 Q8N7P7 452 aa11.83□□□□□ -0.52
CACNA1A-202ENST00000573710 THSD7BQ9C0I4 1608 aa11.83□□□□□ -0.52
CACNA1A-202ENST00000573710 C20orf203Q8NBC4 194 aa11.82□□□□□ -0.52
CACNA1A-202ENST00000573710 NDUFA7O95182 113 aa11.82□□□□□ -0.52
CACNA1A-202ENST00000573710 NEXN-AS1Q8NBZ9 246 aa11.82□□□□□ -0.52
CACNA1A-202ENST00000573710 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
CACNA1A-202ENST00000573710 LINC00308Q8TCZ7 52 aa11.82□□□□□ -0.52
CACNA1A-202ENST00000573710 SMIM9A6NGZ8 99 aa11.82□□□□□ -0.52
CACNA1A-202ENST00000573710 CRIPAKQ8N1N5 446 aa11.82□□□□□ -0.52
CACNA1A-202ENST00000573710 ACANP16112 2415 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms