RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 TMEM242Q9NWH2 141 aa5.64□□□□□ -1.51
SMG6-210ENST00000572205 URGCP-MRPS24S4R325 110 aa5.64□□□□□ -1.51
SMG6-210ENST00000572205 TRBV24-1A0A075B6N3 115 aa5.63□□□□□ -1.51
SMG6-210ENST00000572205 KRTAP10-4P60372 401 aaPredicted RBP5.63□□□□□ -1.51
SMG6-210ENST00000572205 PKIAP61925 76 aa5.63□□□□□ -1.51
SMG6-210ENST00000572205 REG3AQ06141 175 aa5.63□□□□□ -1.51
SMG6-210ENST00000572205 ELOBQ15370 118 aa5.63□□□□□ -1.51
SMG6-210ENST00000572205 C15orf56Q8N910 161 aa5.63□□□□□ -1.51
SMG6-210ENST00000572205 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
SMG6-210ENST00000572205 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.62□□□□□ -1.51
SMG6-210ENST00000572205 TMEM262E9PQX1 116 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 I3L3M4 83 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 SLPIP03973 132 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 PRSS1P07477 247 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 RPL32P62910 135 aaKnown RBP5.62□□□□□ -1.51
SMG6-210ENST00000572205 HBBP68871 147 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 PNRC1Q12796 327 aaPredicted RBP5.62□□□□□ -1.51
SMG6-210ENST00000572205 RIGQ13278 110 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 MRPL54Q6P161 138 aaKnown RBP5.62□□□□□ -1.51
SMG6-210ENST00000572205 KCNIP4Q6PIL6 250 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
SMG6-210ENST00000572205 RMI2Q96E14 147 aa5.62□□□□□ -1.51
SMG6-210ENST00000572205 IGLV10-54A0A075B6I4 117 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 A0A1B0GW15 77 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 H7C423 109 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 PANO1I0J062 215 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 NPYP01303 97 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 HLA-DQA1P01909 254 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 CRPP02741 224 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 APCSP02743 223 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 FGF6P10767 208 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 C10orf91Q5T1B1 145 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 SMIM15Q7Z3B0 74 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 ATP5L2Q7Z4Y8 100 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 ST20Q9HBF5 79 aa5.61□□□□□ -1.51
SMG6-210ENST00000572205 TMEM218A2RU14 115 aa5.6□□□□□ -1.51
SMG6-210ENST00000572205 D6R8Y8 96 aa5.6□□□□□ -1.51
SMG6-210ENST00000572205 FOXI1Q12951 378 aa5.6□□□□□ -1.51
SMG6-210ENST00000572205 UQCC3Q6UW78 93 aa5.6□□□□□ -1.51
SMG6-210ENST00000572205 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.6□□□□□ -1.51
SMG6-210ENST00000572205 BORCS7Q96B45 105 aa5.6□□□□□ -1.51
SMG6-210ENST00000572205 UBE2D4Q9Y2X8 147 aa5.6□□□□□ -1.51
SMG6-210ENST00000572205 FLG2Q5D862 2391 aaPredicted RBP5.6□□□□□ -1.51
SMG6-210ENST00000572205 TRAV8-4A0A0B4J246 113 aa5.59□□□□□ -1.51
SMG6-210ENST00000572205 A4D1N5 150 aa5.59□□□□□ -1.51
SMG6-210ENST00000572205 LINC00862A6NCI5 91 aa5.59□□□□□ -1.51
SMG6-210ENST00000572205 ZNF25P17030 456 aaPredicted RBP5.59□□□□□ -1.51
SMG6-210ENST00000572205 CNBPP62633 177 aaKnown RBP5.59□□□□□ -1.51
SMG6-210ENST00000572205 SCXQ7RTU7 201 aa5.59□□□□□ -1.51
SMG6-210ENST00000572205 SMIM2Q9BVW6 85 aa5.59□□□□□ -1.51
SMG6-210ENST00000572205 CDC42SE2Q9NRR3 84 aa5.59□□□□□ -1.51
SMG6-210ENST00000572205 C7orf77A4D0Y5 90 aa5.58□□□□□ -1.52
SMG6-210ENST00000572205 PPP1R2P9O14990 202 aa5.58□□□□□ -1.52
SMG6-210ENST00000572205 RAB14P61106 215 aa5.58□□□□□ -1.52
SMG6-210ENST00000572205 CIRBPQ14011 172 aaKnown RBP5.58□□□□□ -1.52
SMG6-210ENST00000572205 Q5VSD8 79 aa5.58□□□□□ -1.52
SMG6-210ENST00000572205 Q6ZUT4 128 aa5.58□□□□□ -1.52
SMG6-210ENST00000572205 OR5A1Q8NGJ0 315 aa5.58□□□□□ -1.52
SMG6-210ENST00000572205 C20orf78Q9BR46 151 aa5.58□□□□□ -1.52
SMG6-210ENST00000572205 CARHSP1Q9Y2V2 147 aaKnown RBP5.58□□□□□ -1.52
SMG6-210ENST00000572205 CSDC2Q9Y534 153 aaKnown RBP5.58□□□□□ -1.52
SMG6-210ENST00000572205 PHOX2AO14813 284 aa5.57□□□□□ -1.52
SMG6-210ENST00000572205 UBE2L6O14933 153 aa5.57□□□□□ -1.52
SMG6-210ENST00000572205 PMCHP20382 165 aa5.57□□□□□ -1.52
SMG6-210ENST00000572205 RPL39P62891 51 aaKnown RBP5.57□□□□□ -1.52
SMG6-210ENST00000572205 TMEM136Q6ZRR5 245 aa5.57□□□□□ -1.52
SMG6-210ENST00000572205 COMMD7Q86VX2 200 aa5.57□□□□□ -1.52
SMG6-210ENST00000572205 C9orf163Q8N9P6 203 aa5.57□□□□□ -1.52
SMG6-210ENST00000572205 CHCHD10Q8WYQ3 142 aaPredicted RBP5.57□□□□□ -1.52
SMG6-210ENST00000572205 SEC11CQ9BY50 192 aa5.57□□□□□ -1.52
SMG6-210ENST00000572205 DMBT1Q9UGM3 2413 aaPredicted RBP5.57□□□□□ -1.52
SMG6-210ENST00000572205 GVQW2A0A096LPI5 108 aaPredicted RBP5.56□□□□□ -1.52
SMG6-210ENST00000572205 LINC00959A0A1B0GUT2 108 aa5.56□□□□□ -1.52
SMG6-210ENST00000572205 VCYO14598 125 aa5.56□□□□□ -1.52
SMG6-210ENST00000572205 SMR3BP02814 79 aaPredicted RBP5.56□□□□□ -1.52
SMG6-210ENST00000572205 CIRBP-AS1Q8TBR5 109 aa5.56□□□□□ -1.52
SMG6-210ENST00000572205 TIMM21Q9BVV7 248 aa5.56□□□□□ -1.52
SMG6-210ENST00000572205 PPP1R17O96001 155 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 PPBPP02775 128 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 MT-ND4LP03901 98 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 CKS2P33552 79 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 C14orf177Q52M58 125 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 RNASE13Q5GAN3 156 aaKnown RBP5.55□□□□□ -1.52
SMG6-210ENST00000572205 RNASEKQ6P5S7 137 aaKnown RBP5.55□□□□□ -1.52
SMG6-210ENST00000572205 SDIM1Q6ZPB5 146 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 ORMDL3Q8N138 153 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 IMMP2LQ96T52 175 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 CHAC1Q9BUX1 264 aa5.55□□□□□ -1.52
SMG6-210ENST00000572205 F8W036 122 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 TCAPO15273 167 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 CCL25O15444 150 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 S100A8P05109 93 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 AMMECR1LQ6DCA0 310 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 LINC00173Q6ZV60 143 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 ZNF664Q8N3J9 261 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 BTF3L4Q96K17 158 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 PRELID3AQ96N28 172 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 TNXBP22105 4242 aa5.54□□□□□ -1.52
SMG6-210ENST00000572205 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms