RNA–Protein interactions for RNA: ENST00000571881.2

CLDN7-204, Transcript of claudin 7, human

TSL 3 BASIC

Gene CLDN7, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDN7-204	ENST00000571881	TRBV24-1	A0A075B6N3	115 aa		11.99	□□□□□ -0.49
CLDN7-204	ENST00000571881	KIAA1644	Q3SXP7	199 aa		11.99	□□□□□ -0.49
CLDN7-204	ENST00000571881	KRTAP26-1	Q6PEX3	210 aa		11.99	□□□□□ -0.49
CLDN7-204	ENST00000571881	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.99	□□□□□ -0.49
CLDN7-204	ENST00000571881	hDV102S1	A0JD36	115 aa		11.98	□□□□□ -0.49
CLDN7-204	ENST00000571881	TCAP	O15273	167 aa		11.98	□□□□□ -0.49
CLDN7-204	ENST00000571881	PRSS1	P07477	247 aa		11.98	□□□□□ -0.49
CLDN7-204	ENST00000571881	RHEB	Q15382	184 aa		11.98	□□□□□ -0.49
CLDN7-204	ENST00000571881	IMMP2L	Q96T52	175 aa		11.98	□□□□□ -0.49
CLDN7-204	ENST00000571881	RAB5A	P20339	215 aa		11.97	□□□□□ -0.49
CLDN7-204	ENST00000571881	XCL1	P47992	114 aa		11.97	□□□□□ -0.49
CLDN7-204	ENST00000571881	RNASE13	Q5GAN3	156 aa	Known RBP	11.97	□□□□□ -0.49
CLDN7-204	ENST00000571881	HERC2	O95714	4834 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	PHOX2A	O14813	284 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	SNAPIN	O95295	136 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	XG	P55808	180 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	SS18	Q15532	418 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	MRPL52	Q86TS9	123 aa	Known RBP	11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	SVBP	Q8N300	66 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	ZNF664	Q8N3J9	261 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	MAP1LC3A	Q9H492	121 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	AP5S1	Q9NUS5	200 aa		11.96	□□□□□ -0.49
CLDN7-204	ENST00000571881	CCL25	O15444	150 aa		11.95	□□□□□ -0.5
CLDN7-204	ENST00000571881	RPL32	P62910	135 aa	Known RBP	11.95	□□□□□ -0.5
CLDN7-204	ENST00000571881	CDC42SE2	Q9NRR3	84 aa		11.95	□□□□□ -0.5
CLDN7-204	ENST00000571881	FAM30A	Q9NZY2	134 aa		11.95	□□□□□ -0.5
CLDN7-204	ENST00000571881	UBE2D4	Q9Y2X8	147 aa		11.95	□□□□□ -0.5
CLDN7-204	ENST00000571881	DNAH5	Q8TE73	4624 aa		11.94	□□□□□ -0.5
CLDN7-204	ENST00000571881	LRP1B	Q9NZR2	4599 aa		11.94	□□□□□ -0.5
CLDN7-204	ENST00000571881	LINC00959	A0A1B0GUT2	108 aa		11.94	□□□□□ -0.5
CLDN7-204	ENST00000571881	SMR3B	P02814	79 aa	Predicted RBP	11.94	□□□□□ -0.5
CLDN7-204	ENST00000571881	RPL39	P62891	51 aa	Known RBP	11.94	□□□□□ -0.5
CLDN7-204	ENST00000571881		Q8N1X5	172 aa		11.94	□□□□□ -0.5
CLDN7-204	ENST00000571881	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.93	□□□□□ -0.5
CLDN7-204	ENST00000571881	HIGD2B	Q4VC39	106 aa		11.93	□□□□□ -0.5
CLDN7-204	ENST00000571881	CFAP161	Q6P656	301 aa		11.93	□□□□□ -0.5
CLDN7-204	ENST00000571881		Q6ZUT4	128 aa		11.93	□□□□□ -0.5
CLDN7-204	ENST00000571881	KRTAP4-5	Q9BYR2	181 aa		11.92	□□□□□ -0.5
CLDN7-204	ENST00000571881	LAMTOR2	Q9Y2Q5	125 aa		11.92	□□□□□ -0.5
CLDN7-204	ENST00000571881	RYR1	P21817	5038 aa		11.91	□□□□□ -0.5
CLDN7-204	ENST00000571881	TRAV9-1	A0A075B6T8	112 aa		11.91	□□□□□ -0.5
CLDN7-204	ENST00000571881	TRAV13-1	A0A0B4J241	112 aa		11.91	□□□□□ -0.5
CLDN7-204	ENST00000571881	FABP9	Q0Z7S8	132 aa		11.91	□□□□□ -0.5
CLDN7-204	ENST00000571881	KRTAP17-1	Q9BYP8	105 aa		11.91	□□□□□ -0.5
CLDN7-204	ENST00000571881	EPM2A	B3EWF7	344 aa		11.9	□□□□□ -0.5
CLDN7-204	ENST00000571881	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.89	□□□□□ -0.51
CLDN7-204	ENST00000571881	FOXI1	Q12951	378 aa		11.89	□□□□□ -0.51
CLDN7-204	ENST00000571881	C15orf56	Q8N910	161 aa		11.89	□□□□□ -0.51
CLDN7-204	ENST00000571881	TIMM21	Q9BVV7	248 aa		11.89	□□□□□ -0.51
CLDN7-204	ENST00000571881	MRPL18	Q9H0U6	180 aa	Known RBP	11.89	□□□□□ -0.51
CLDN7-204	ENST00000571881	CSDC2	Q9Y534	153 aa	Known RBP	11.89	□□□□□ -0.51
CLDN7-204	ENST00000571881	HSPG2	P98160	4391 aa		11.88	□□□□□ -0.51
CLDN7-204	ENST00000571881	IFI27	P40305	119 aa	Predicted RBP	11.88	□□□□□ -0.51
CLDN7-204	ENST00000571881	SPANXA1	Q9NS26	97 aa		11.88	□□□□□ -0.51
CLDN7-204	ENST00000571881	MAL	P21145	153 aa		11.87	□□□□□ -0.51
CLDN7-204	ENST00000571881		Q5VSD8	79 aa		11.87	□□□□□ -0.51
CLDN7-204	ENST00000571881		Q8N8P6	123 aa		11.87	□□□□□ -0.51
CLDN7-204	ENST00000571881	OPRPN	Q99935	248 aa	Predicted RBP	11.87	□□□□□ -0.51
CLDN7-204	ENST00000571881	APOB	P04114	4563 aa	Known RBP	11.86	□□□□□ -0.51
CLDN7-204	ENST00000571881	C1orf196	B1AJZ1	125 aa		11.86	□□□□□ -0.51
CLDN7-204	ENST00000571881	CD164L2	Q6UWJ8	174 aa		11.86	□□□□□ -0.51
CLDN7-204	ENST00000571881	C9orf163	Q8N9P6	203 aa		11.86	□□□□□ -0.51
CLDN7-204	ENST00000571881	GNB1L	Q9BYB4	327 aa		11.86	□□□□□ -0.51
CLDN7-204	ENST00000571881	TRAPPC1	Q9Y5R8	145 aa		11.86	□□□□□ -0.51
CLDN7-204	ENST00000571881	IGHV1-58	A0A0C4DH39	117 aa		11.85	□□□□□ -0.51
CLDN7-204	ENST00000571881	IFITM10	A6NMD0	228 aa		11.85	□□□□□ -0.51
CLDN7-204	ENST00000571881	FAM229A	H3BQW9	127 aa		11.85	□□□□□ -0.51
CLDN7-204	ENST00000571881		Q6ZSA8	131 aa		11.85	□□□□□ -0.51
CLDN7-204	ENST00000571881	SCX	Q7RTU7	201 aa		11.85	□□□□□ -0.51
CLDN7-204	ENST00000571881	CBLN2	Q8IUK8	224 aa		11.85	□□□□□ -0.51
CLDN7-204	ENST00000571881	NXT2	Q9NPJ8	142 aa	Known RBP	11.85	□□□□□ -0.51
CLDN7-204	ENST00000571881	IGHV3-64	A0A075B6Q5	118 aa		11.84	□□□□□ -0.51
CLDN7-204	ENST00000571881	CNBP	P62633	177 aa	Known RBP	11.84	□□□□□ -0.51
CLDN7-204	ENST00000571881	COX19	Q49B96	90 aa		11.84	□□□□□ -0.51
CLDN7-204	ENST00000571881	PRSS3P2	Q8NHM4	247 aa		11.84	□□□□□ -0.51
CLDN7-204	ENST00000571881	CYSLTR1	Q9Y271	337 aa		11.84	□□□□□ -0.51
CLDN7-204	ENST00000571881	PRSS47	A8MTI9	375 aa		11.83	□□□□□ -0.52
CLDN7-204	ENST00000571881	COX7A2L	O14548	114 aa		11.83	□□□□□ -0.52
CLDN7-204	ENST00000571881	ORMDL2	Q53FV1	153 aa		11.83	□□□□□ -0.52
CLDN7-204	ENST00000571881	LINC00526	Q96FQ7	95 aa		11.83	□□□□□ -0.52
CLDN7-204	ENST00000571881	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.82	□□□□□ -0.52
CLDN7-204	ENST00000571881	ZNF561-AS1	K7EIQ3	104 aa		11.82	□□□□□ -0.52
CLDN7-204	ENST00000571881	C2orf66	Q6UXQ4	117 aa		11.82	□□□□□ -0.52
CLDN7-204	ENST00000571881	C5orf38	Q86SI9	138 aa		11.82	□□□□□ -0.52
CLDN7-204	ENST00000571881	DPH3	Q96FX2	82 aa		11.82	□□□□□ -0.52
CLDN7-204	ENST00000571881	CHAC1	Q9BUX1	264 aa		11.82	□□□□□ -0.52
CLDN7-204	ENST00000571881	MT-ND6	P03923	174 aa		11.81	□□□□□ -0.52
CLDN7-204	ENST00000571881	SLPI	P03973	132 aa		11.81	□□□□□ -0.52
CLDN7-204	ENST00000571881	MRPS36	P82909	103 aa	Known RBP	11.81	□□□□□ -0.52
CLDN7-204	ENST00000571881	TMEM141	Q96I45	108 aa		11.81	□□□□□ -0.52
CLDN7-204	ENST00000571881	SMCO4	Q9NRQ5	59 aa		11.81	□□□□□ -0.52
CLDN7-204	ENST00000571881		Q6ZN92	141 aa		11.8	□□□□□ -0.52
CLDN7-204	ENST00000571881	LINC00528	Q8N1L1	170 aa		11.8	□□□□□ -0.52
CLDN7-204	ENST00000571881	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.8	□□□□□ -0.52
CLDN7-204	ENST00000571881	IGLV4-3	A0A075B6K6	122 aa		11.79	□□□□□ -0.52
CLDN7-204	ENST00000571881	TEX43	Q6ZNM6	134 aa		11.79	□□□□□ -0.52
CLDN7-204	ENST00000571881	CIRBP-AS1	Q8TBR5	109 aa		11.79	□□□□□ -0.52
CLDN7-204	ENST00000571881		K7EMI3	77 aa		11.78	□□□□□ -0.52
CLDN7-204	ENST00000571881	APOM	O95445	188 aa		11.78	□□□□□ -0.52
CLDN7-204	ENST00000571881	CARD19	Q96LW7	228 aa		11.78	□□□□□ -0.52

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