RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 SH2D6Q7Z4S9 175 aa13.63□□□□□ -0.23
RPAIN-210ENST00000571613 E9PLD3 99 aa13.62□□□□□ -0.23
RPAIN-210ENST00000571613 CEMP1Q6PRD7 247 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-210ENST00000571613 OR5A1Q8NGJ0 315 aa13.62□□□□□ -0.23
RPAIN-210ENST00000571613 CHAC1Q9BUX1 264 aa13.62□□□□□ -0.23
RPAIN-210ENST00000571613 TRAV26-1A0A087WT03 109 aa13.61□□□□□ -0.23
RPAIN-210ENST00000571613 F5H768 121 aa13.61□□□□□ -0.23
RPAIN-210ENST00000571613 Q6ZUT4 128 aa13.61□□□□□ -0.23
RPAIN-210ENST00000571613 FAM104AQ969W3 186 aa13.61□□□□□ -0.23
RPAIN-210ENST00000571613 TMEM170BQ5T4T1 132 aa13.6□□□□□ -0.23
RPAIN-210ENST00000571613 SPATA25Q9BR10 227 aa13.6□□□□□ -0.23
RPAIN-210ENST00000571613 RETNQ9HD89 108 aa13.6□□□□□ -0.23
RPAIN-210ENST00000571613 ANK2Q01484 3957 aa13.6□□□□□ -0.23
RPAIN-210ENST00000571613 SEC11AP67812 179 aa13.59□□□□□ -0.23
RPAIN-210ENST00000571613 VSIG2Q96IQ7 327 aa13.59□□□□□ -0.23
RPAIN-210ENST00000571613 IGKV2D-26A0A0A0MRZ7 120 aa13.59□□□□□ -0.23
RPAIN-210ENST00000571613 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
RPAIN-210ENST00000571613 MRPL23Q16540 153 aaKnown RBP13.59□□□□□ -0.23
RPAIN-210ENST00000571613 TCTAP57738 103 aa13.58□□□□□ -0.24
RPAIN-210ENST00000571613 C12orf74Q32Q52 190 aa13.58□□□□□ -0.24
RPAIN-210ENST00000571613 PCP2Q8IVA1 136 aa13.58□□□□□ -0.24
RPAIN-210ENST00000571613 DNAH3Q8TD57 4116 aa13.58□□□□□ -0.24
RPAIN-210ENST00000571613 A0A0J9YXV3 536 aa13.57□□□□□ -0.24
RPAIN-210ENST00000571613 K7EIL1 84 aa13.57□□□□□ -0.24
RPAIN-210ENST00000571613 CHCHD5Q9BSY4 110 aa13.57□□□□□ -0.24
RPAIN-210ENST00000571613 CDC42SE2Q9NRR3 84 aa13.57□□□□□ -0.24
RPAIN-210ENST00000571613 UBE2D1P51668 147 aa13.56□□□□□ -0.24
RPAIN-210ENST00000571613 SNHG12Q9BXW3 62 aa13.56□□□□□ -0.24
RPAIN-210ENST00000571613 ICOSQ9Y6W8 199 aa13.56□□□□□ -0.24
RPAIN-210ENST00000571613 A0A0J9YY99 117 aa13.56□□□□□ -0.24
RPAIN-210ENST00000571613 H3BNG1 76 aa13.56□□□□□ -0.24
RPAIN-210ENST00000571613 TIRAPP58753 221 aa13.56□□□□□ -0.24
RPAIN-210ENST00000571613 HIGD1BQ9P298 99 aa13.56□□□□□ -0.24
RPAIN-210ENST00000571613 TRAV8-6A0A0B4J262 113 aa13.55□□□□□ -0.24
RPAIN-210ENST00000571613 HTN3P15516 51 aa13.55□□□□□ -0.24
RPAIN-210ENST00000571613 ZNF22P17026 224 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-210ENST00000571613 DEFB121Q5J5C9 76 aa13.55□□□□□ -0.24
RPAIN-210ENST00000571613 FAM19A3Q7Z5A8 133 aa13.55□□□□□ -0.24
RPAIN-210ENST00000571613 TM2D3Q9BRN9 247 aa13.55□□□□□ -0.24
RPAIN-210ENST00000571613 GEMIN7Q9H840 131 aaKnown RBP13.55□□□□□ -0.24
RPAIN-210ENST00000571613 NBEAL2Q6ZNJ1 2754 aa13.55□□□□□ -0.24
RPAIN-210ENST00000571613 RNASE13Q5GAN3 156 aaKnown RBP13.54□□□□□ -0.24
RPAIN-210ENST00000571613 C2orf91Q6ZV80 131 aa13.54□□□□□ -0.24
RPAIN-210ENST00000571613 TMEM223A0PJW6 202 aa13.53□□□□□ -0.24
RPAIN-210ENST00000571613 HERVK_113P63121 156 aa13.53□□□□□ -0.24
RPAIN-210ENST00000571613 GAGE6Q13070 117 aa13.53□□□□□ -0.24
RPAIN-210ENST00000571613 A0A0J9YWU9 116 aa13.52□□□□□ -0.25
RPAIN-210ENST00000571613 MYMXA0A1B0GTQ4 84 aa13.52□□□□□ -0.25
RPAIN-210ENST00000571613 A0A1B0GUV1 79 aa13.52□□□□□ -0.25
RPAIN-210ENST00000571613 H3BRM9 83 aa13.52□□□□□ -0.25
RPAIN-210ENST00000571613 EREGO14944 169 aa13.51□□□□□ -0.25
RPAIN-210ENST00000571613 PRB2P02812 416 aaPredicted RBP13.51□□□□□ -0.25
RPAIN-210ENST00000571613 C11orf45Q8TAV5 145 aa13.51□□□□□ -0.25
RPAIN-210ENST00000571613 PLEKHB2Q96CS7 222 aa13.51□□□□□ -0.25
RPAIN-210ENST00000571613 TP73-AS1Q9UF72 201 aa13.51□□□□□ -0.25
RPAIN-210ENST00000571613 PKD1L1Q8TDX9 2849 aa13.5□□□□□ -0.25
RPAIN-210ENST00000571613 LEPROTO15243 131 aa13.5□□□□□ -0.25
RPAIN-210ENST00000571613 IGLV5-45A0A087WSX0 123 aa13.5□□□□□ -0.25
RPAIN-210ENST00000571613 HSD52Q0P140 79 aa13.5□□□□□ -0.25
RPAIN-210ENST00000571613 LINC00469Q8N7U9 141 aa13.5□□□□□ -0.25
RPAIN-210ENST00000571613 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
RPAIN-210ENST00000571613 HINT1P49773 126 aaPredicted RBP13.49□□□□□ -0.25
RPAIN-210ENST00000571613 BATFQ16520 125 aa13.49□□□□□ -0.25
RPAIN-210ENST00000571613 A0A096LPF7 62 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 ZNF815PA8K554 130 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 TMEM262E9PQX1 116 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 J3QQQ9 107 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 MPV17L2Q567V2 206 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 COL5A1-AS1Q5SY13 56 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 Q6ZTC4 211 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 MAPKAPK5-AS1Q8N8E1 139 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 TTTY13Q9BZ97 58 aa13.48□□□□□ -0.25
RPAIN-210ENST00000571613 LINC00242Q5T6M2 205 aa13.47□□□□□ -0.25
RPAIN-210ENST00000571613 LELP1Q5T871 98 aa13.47□□□□□ -0.25
RPAIN-210ENST00000571613 TRAV13-1A0A0B4J241 112 aa13.47□□□□□ -0.25
RPAIN-210ENST00000571613 IGHV1-58A0A0C4DH39 117 aa13.47□□□□□ -0.25
RPAIN-210ENST00000571613 TAL2Q16559 108 aa13.46□□□□□ -0.26
RPAIN-210ENST00000571613 MRAPQ8TCY5 172 aa13.46□□□□□ -0.26
RPAIN-210ENST00000571613 CCL25O15444 150 aa13.45□□□□□ -0.26
RPAIN-210ENST00000571613 BVES-AS1Q5T3Y7 98 aa13.45□□□□□ -0.26
RPAIN-210ENST00000571613 IGLV4-60A0A075B6I1 120 aa13.44□□□□□ -0.26
RPAIN-210ENST00000571613 RBX1P62877 108 aa13.44□□□□□ -0.26
RPAIN-210ENST00000571613 SCGB1D4Q6XE38 83 aa13.44□□□□□ -0.26
RPAIN-210ENST00000571613 CDKN2A-AS1Q9UH64 79 aa13.44□□□□□ -0.26
RPAIN-210ENST00000571613 DEFB131BA0A096LNP1 70 aa13.43□□□□□ -0.26
RPAIN-210ENST00000571613 IGHV3-30-3P0DP02 117 aa13.43□□□□□ -0.26
RPAIN-210ENST00000571613 NANOS2P60321 138 aaKnown RBP13.43□□□□□ -0.26
RPAIN-210ENST00000571613 LURAP1LQ8IV03 231 aa13.42□□□□□ -0.26
RPAIN-210ENST00000571613 NOTCH1P46531 2555 aa13.41□□□□□ -0.26
RPAIN-210ENST00000571613 TRAV10A0A0B4J240 114 aa13.4□□□□□ -0.26
RPAIN-210ENST00000571613 COX6A2Q02221 97 aa13.4□□□□□ -0.26
RPAIN-210ENST00000571613 LYPD5Q6UWN5 251 aa13.4□□□□□ -0.26
RPAIN-210ENST00000571613 ORAOV1Q8WV07 137 aa13.4□□□□□ -0.26
RPAIN-210ENST00000571613 SPINK8P0C7L1 97 aa13.4□□□□□ -0.26
RPAIN-210ENST00000571613 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
RPAIN-210ENST00000571613 SS18Q15532 418 aa13.4□□□□□ -0.26
RPAIN-210ENST00000571613 MGAM2Q2M2H8 2515 aa13.39□□□□□ -0.27
RPAIN-210ENST00000571613 IGHV3-64A0A075B6Q5 118 aa13.39□□□□□ -0.27
RPAIN-210ENST00000571613 A6NDN8 102 aa13.38□□□□□ -0.27
RPAIN-210ENST00000571613 HIST1H4GQ99525 98 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms