RNA–Protein interactions for RNA: ENST00000571186.5

CIITA-205, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 1,041 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-205ENST00000571186 KRTAP26-1Q6PEX3 210 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 UQCC3Q6UW78 93 aa9.2□□□□□ -0.94
CIITA-205ENST00000571186 MT1HL1P0DM35 61 aa9.19□□□□□ -0.94
CIITA-205ENST00000571186 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
CIITA-205ENST00000571186 ANAPC16Q96DE5 110 aa9.19□□□□□ -0.94
CIITA-205ENST00000571186 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
CIITA-205ENST00000571186 IGKV3OR2-268A0A0C4DH90 116 aa9.18□□□□□ -0.94
CIITA-205ENST00000571186 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
CIITA-205ENST00000571186 FGF6P10767 208 aa9.18□□□□□ -0.94
CIITA-205ENST00000571186 ESDP10768 282 aa9.18□□□□□ -0.94
CIITA-205ENST00000571186 CKS2P33552 79 aa9.18□□□□□ -0.94
CIITA-205ENST00000571186 AMMECR1LQ6DCA0 310 aa9.18□□□□□ -0.94
CIITA-205ENST00000571186 RNASEKQ6P5S7 137 aaKnown RBP9.18□□□□□ -0.94
CIITA-205ENST00000571186 D6R8Y8 96 aa9.17□□□□□ -0.94
CIITA-205ENST00000571186 PANO1I0J062 215 aa9.17□□□□□ -0.94
CIITA-205ENST00000571186 SUMO2P61956 95 aaKnown RBP9.17□□□□□ -0.94
CIITA-205ENST00000571186 Q6ZRU5 148 aa9.17□□□□□ -0.94
CIITA-205ENST00000571186 DPH3Q96FX2 82 aa9.17□□□□□ -0.94
CIITA-205ENST00000571186 LINC00862A6NCI5 91 aa9.16□□□□□ -0.94
CIITA-205ENST00000571186 VCYO14598 125 aa9.16□□□□□ -0.94
CIITA-205ENST00000571186 TNFRSF6BO95407 300 aa9.16□□□□□ -0.94
CIITA-205ENST00000571186 NPYP01303 97 aa9.16□□□□□ -0.94
CIITA-205ENST00000571186 S100A8P05109 93 aa9.16□□□□□ -0.94
CIITA-205ENST00000571186 SDIM1Q6ZPB5 146 aa9.16□□□□□ -0.94
CIITA-205ENST00000571186 ATP5L2Q7Z4Y8 100 aa9.16□□□□□ -0.94
CIITA-205ENST00000571186 H7C423 109 aa9.15□□□□□ -0.94
CIITA-205ENST00000571186 PPP1R17O96001 155 aa9.15□□□□□ -0.94
CIITA-205ENST00000571186 SEC11CQ9BY50 192 aa9.15□□□□□ -0.94
CIITA-205ENST00000571186 TRBV24-1A0A075B6N3 115 aa9.14□□□□□ -0.95
CIITA-205ENST00000571186 FCER1GP30273 86 aa9.14□□□□□ -0.95
CIITA-205ENST00000571186 TRAV8-4A0A0B4J246 113 aa9.13□□□□□ -0.95
CIITA-205ENST00000571186 C7orf77A4D0Y5 90 aa9.13□□□□□ -0.95
CIITA-205ENST00000571186 BTF3L4Q96K17 158 aa9.13□□□□□ -0.95
CIITA-205ENST00000571186 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
CIITA-205ENST00000571186 C20orf78Q9BR46 151 aa9.13□□□□□ -0.95
CIITA-205ENST00000571186 GAGE12HA6NDE8 117 aa9.12□□□□□ -0.95
CIITA-205ENST00000571186 TMEM136Q6ZRR5 245 aa9.12□□□□□ -0.95
CIITA-205ENST00000571186 CLRN3Q8NCR9 226 aa9.12□□□□□ -0.95
CIITA-205ENST00000571186 TMEM101Q96IK0 257 aa9.12□□□□□ -0.95
CIITA-205ENST00000571186 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
CIITA-205ENST00000571186 SMIM2Q9BVW6 85 aa9.12□□□□□ -0.95
CIITA-205ENST00000571186 TCAPO15273 167 aa9.11□□□□□ -0.95
CIITA-205ENST00000571186 ZNF25P17030 456 aaPredicted RBP9.11□□□□□ -0.95
CIITA-205ENST00000571186 C10orf91Q5T1B1 145 aa9.11□□□□□ -0.95
CIITA-205ENST00000571186 MRPL52Q86TS9 123 aaKnown RBP9.11□□□□□ -0.95
CIITA-205ENST00000571186 ORMDL3Q8N138 153 aa9.11□□□□□ -0.95
CIITA-205ENST00000571186 OR5A1Q8NGJ0 315 aa9.11□□□□□ -0.95
CIITA-205ENST00000571186 CTDSP1Q9GZU7 261 aa9.11□□□□□ -0.95
CIITA-205ENST00000571186 LRP2P98164 4655 aa9.11□□□□□ -0.95
CIITA-205ENST00000571186 hDV102S1A0JD36 115 aa9.1□□□□□ -0.95
CIITA-205ENST00000571186 PPBPP02775 128 aa9.1□□□□□ -0.95
CIITA-205ENST00000571186 RPL32P62910 135 aaKnown RBP9.1□□□□□ -0.95
CIITA-205ENST00000571186 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
CIITA-205ENST00000571186 CHCHD10Q8WYQ3 142 aaPredicted RBP9.1□□□□□ -0.95
CIITA-205ENST00000571186 IMMP2LQ96T52 175 aa9.1□□□□□ -0.95
CIITA-205ENST00000571186 CDC42SE2Q9NRR3 84 aa9.1□□□□□ -0.95
CIITA-205ENST00000571186 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
CIITA-205ENST00000571186 TNXBP22105 4242 aa9.09□□□□□ -0.95
CIITA-205ENST00000571186 LOC389332A0A1B0GUA5 103 aa9.09□□□□□ -0.95
CIITA-205ENST00000571186 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
CIITA-205ENST00000571186 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
CIITA-205ENST00000571186 ZNF664Q8N3J9 261 aa9.09□□□□□ -0.95
CIITA-205ENST00000571186 AP5S1Q9NUS5 200 aa9.09□□□□□ -0.95
CIITA-205ENST00000571186 CARHSP1Q9Y2V2 147 aaKnown RBP9.09□□□□□ -0.95
CIITA-205ENST00000571186 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
CIITA-205ENST00000571186 A0A087WYN8 130 aa9.08□□□□□ -0.96
CIITA-205ENST00000571186 LINC00959A0A1B0GUT2 108 aa9.08□□□□□ -0.96
CIITA-205ENST00000571186 PHOX2AO14813 284 aa9.08□□□□□ -0.96
CIITA-205ENST00000571186 CHTF8P0CG12 524 aa9.08□□□□□ -0.96
CIITA-205ENST00000571186 CNBPP62633 177 aaKnown RBP9.08□□□□□ -0.96
CIITA-205ENST00000571186 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.07□□□□□ -0.96
CIITA-205ENST00000571186 CCL25O15444 150 aa9.07□□□□□ -0.96
CIITA-205ENST00000571186 XCL1P47992 114 aa9.07□□□□□ -0.96
CIITA-205ENST00000571186 FOXI1Q12951 378 aa9.07□□□□□ -0.96
CIITA-205ENST00000571186 KIAA1644Q3SXP7 199 aa9.07□□□□□ -0.96
CIITA-205ENST00000571186 Q6ZUT4 128 aa9.07□□□□□ -0.96
CIITA-205ENST00000571186 C15orf56Q8N910 161 aa9.07□□□□□ -0.96
CIITA-205ENST00000571186 RPS10P5Q9NQ39 176 aa9.07□□□□□ -0.96
CIITA-205ENST00000571186 SLPIP03973 132 aa9.06□□□□□ -0.96
CIITA-205ENST00000571186 OPRPNQ99935 248 aaPredicted RBP9.06□□□□□ -0.96
CIITA-205ENST00000571186 RNF213Q63HN8 5207 aa9.06□□□□□ -0.96
CIITA-205ENST00000571186 HIGD2BQ4VC39 106 aa9.05□□□□□ -0.96
CIITA-205ENST00000571186 C7orf33Q8WU49 177 aa9.05□□□□□ -0.96
CIITA-205ENST00000571186 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
CIITA-205ENST00000571186 MAP1LC3AQ9H492 121 aa9.05□□□□□ -0.96
CIITA-205ENST00000571186 CSDC2Q9Y534 153 aaKnown RBP9.05□□□□□ -0.96
CIITA-205ENST00000571186 PRSS47A8MTI9 375 aa9.04□□□□□ -0.96
CIITA-205ENST00000571186 S100PP25815 95 aa9.04□□□□□ -0.96
CIITA-205ENST00000571186 RHEBQ15382 184 aa9.04□□□□□ -0.96
CIITA-205ENST00000571186 SS18Q15532 418 aa9.04□□□□□ -0.96
CIITA-205ENST00000571186 SPACA4Q8TDM5 124 aa9.04□□□□□ -0.96
CIITA-205ENST00000571186 TMEM18Q96B42 140 aa9.04□□□□□ -0.96
CIITA-205ENST00000571186 TRAV9-1A0A075B6T8 112 aa9.03□□□□□ -0.96
CIITA-205ENST00000571186 TRAV13-1A0A0B4J241 112 aa9.03□□□□□ -0.96
CIITA-205ENST00000571186 APOC3P02656 99 aa9.03□□□□□ -0.96
CIITA-205ENST00000571186 RAB5AP20339 215 aa9.03□□□□□ -0.96
CIITA-205ENST00000571186 Q8N8P6 123 aa9.03□□□□□ -0.96
CIITA-205ENST00000571186 TIMM21Q9BVV7 248 aa9.03□□□□□ -0.96
CIITA-205ENST00000571186 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
CIITA-205ENST00000571186 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms