RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 PHOX2AO14813 284 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 UBE2V1Q13404 147 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 MAJINQ3KP22 176 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 HIGD2BQ4VC39 106 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 AMMECR1LQ6DCA0 310 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 C15orf56Q8N910 161 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 NIT2Q9NQR4 276 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 BIN3Q9NQY0 253 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 PLAC8Q9NZF1 115 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 LRP2P98164 4655 aa4.11□□□□□ -1.75
SMG6-204ENST00000570606 C19orf71A6NCJ1 209 aa4.1□□□□□ -1.75
SMG6-204ENST00000570606 NDUFS6O75380 124 aaKnown RBP4.1□□□□□ -1.75
SMG6-204ENST00000570606 APCSP02743 223 aa4.1□□□□□ -1.75
SMG6-204ENST00000570606 RPS10P46783 165 aaKnown RBP4.1□□□□□ -1.75
SMG6-204ENST00000570606 PRR3P79522 188 aaKnown RBP4.1□□□□□ -1.75
SMG6-204ENST00000570606 COX6A2Q02221 97 aa4.1□□□□□ -1.75
SMG6-204ENST00000570606 RNASEKQ6P5S7 137 aaKnown RBP4.1□□□□□ -1.75
SMG6-204ENST00000570606 LYZL1Q6UWQ5 148 aa4.1□□□□□ -1.75
SMG6-204ENST00000570606 Q75L30 129 aa4.1□□□□□ -1.75
SMG6-204ENST00000570606 GTSF1Q8WW33 167 aa4.1□□□□□ -1.75
SMG6-204ENST00000570606 SMIM12Q96EX1 92 aa4.1□□□□□ -1.75
SMG6-204ENST00000570606 RNF213Q63HN8 5207 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.75
SMG6-204ENST00000570606 TRAV26-2A0A0B4J265 109 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.75
SMG6-204ENST00000570606 RAB19A4D1S5 217 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 HMSDA8MTL9 139 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 PDE6DO43924 150 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 NTF3P20783 257 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 CTRLP40313 264 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 CCL20P78556 96 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 MEF2BQ02080 365 aaPredicted RBP4.09□□□□□ -1.75
SMG6-204ENST00000570606 GAGE2BQ13066 116 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 GAGE2EQ4V326 116 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 GAGE2AQ6NT46 116 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 SMIM15Q7Z3B0 74 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 STPG4Q8N801 248 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 LYPD6BQ8NI32 183 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 CHCHD10Q8WYQ3 142 aaPredicted RBP4.09□□□□□ -1.75
SMG6-204ENST00000570606 MED9Q9NWA0 146 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 GAGE2DQ9UEU5 116 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 PKIGQ9Y2B9 76 aa4.09□□□□□ -1.75
SMG6-204ENST00000570606 GVQW2A0A096LPI5 108 aaPredicted RBP4.08□□□□□ -1.76
SMG6-204ENST00000570606 TRAV1-1A0A0B4J248 108 aa4.08□□□□□ -1.76
SMG6-204ENST00000570606 NCR2O95944 276 aa4.08□□□□□ -1.76
SMG6-204ENST00000570606 BCL2P10415 239 aa4.08□□□□□ -1.76
SMG6-204ENST00000570606 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
SMG6-204ENST00000570606 EIF5AL1Q6IS14 154 aaKnown RBP4.08□□□□□ -1.76
SMG6-204ENST00000570606 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
SMG6-204ENST00000570606 RPL39LQ96EH5 51 aaKnown RBP4.08□□□□□ -1.76
SMG6-204ENST00000570606 RPP21Q9H633 154 aaKnown RBP4.08□□□□□ -1.76
SMG6-204ENST00000570606 TRBV20OR9-2A0A075B6H5 130 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 A0A096LNI7 61 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 H7C423 109 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 FGF6P10767 208 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 XCL1P47992 114 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 REG3GQ6UW15 175 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 C9orf62Q8N4C0 152 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 TMEM101Q96IK0 257 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 BTF3L4Q96K17 158 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 CARD19Q96LW7 228 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 CNFNQ9BYD5 112 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 RNASE7Q9H1E1 156 aaKnown RBP4.07□□□□□ -1.76
SMG6-204ENST00000570606 LINC00474Q9P2X8 69 aa4.07□□□□□ -1.76
SMG6-204ENST00000570606 IGLV5-37A0A075B6J1 123 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 IGHV1-58A0A0C4DH39 117 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 SDHAF1A6NFY7 115 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 CCL25O15444 150 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 ZNF25P17030 456 aaPredicted RBP4.06□□□□□ -1.76
SMG6-204ENST00000570606 PMCHP20382 165 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 TEX261Q6UWH6 196 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 OR5A1Q8NGJ0 315 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 LINC01600Q96MT4 127 aa4.06□□□□□ -1.76
SMG6-204ENST00000570606 A0A0J9YXV3 536 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 I3L3M4 83 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 K7EN84 100 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 PRSS2P07478 247 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 TAGLN2P37802 199 aaKnown RBP4.05□□□□□ -1.76
SMG6-204ENST00000570606 PNRC1Q12796 327 aaPredicted RBP4.05□□□□□ -1.76
SMG6-204ENST00000570606 SS18Q15532 418 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 BORCS7Q96B45 105 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 LINC00526Q96FQ7 95 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 MRAP2Q96G30 205 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 TMEM242Q9NWH2 141 aa4.05□□□□□ -1.76
SMG6-204ENST00000570606 LINC00959A0A1B0GUT2 108 aa4.04□□□□□ -1.76
SMG6-204ENST00000570606 GATCO43716 136 aaKnown RBP4.04□□□□□ -1.76
SMG6-204ENST00000570606 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
SMG6-204ENST00000570606 SYCNQ0VAF6 134 aa4.04□□□□□ -1.76
SMG6-204ENST00000570606 SPINK6Q6UWN8 80 aa4.04□□□□□ -1.76
SMG6-204ENST00000570606 Q6ZRP5 223 aa4.04□□□□□ -1.76
SMG6-204ENST00000570606 ISOC2Q96AB3 205 aa4.04□□□□□ -1.76
SMG6-204ENST00000570606 ST20Q9HBF5 79 aa4.04□□□□□ -1.76
SMG6-204ENST00000570606 TRBV6-5A0A0K0K1A5 114 aa4.03□□□□□ -1.76
SMG6-204ENST00000570606 LOC107984640A0A0U1RRK4 108 aa4.03□□□□□ -1.76
SMG6-204ENST00000570606 C7orf77A4D0Y5 90 aa4.03□□□□□ -1.76
SMG6-204ENST00000570606 A8MWL6 223 aa4.03□□□□□ -1.76
SMG6-204ENST00000570606 TSHBP01222 138 aa4.03□□□□□ -1.76
SMG6-204ENST00000570606 CEBPGP53567 150 aa4.03□□□□□ -1.76
SMG6-204ENST00000570606 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms