RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 SLC51BQ86UW2 128 aa6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 CAMK2N2Q96S95 79 aa6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 OPRPNQ99935 248 aaPredicted RBP6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 RPP21Q9H633 154 aaKnown RBP6.13□□□□□ -1.43
CTDNEP1-202ENST00000570380 H2AFB1P0C5Y9 115 aa6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 IGLC6P0CF74 106 aa6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 SRSF3P84103 164 aaKnown RBP6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 CST9LP1Q5W188 147 aa6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 TSKUQ8WUA8 353 aa6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 TCEAL7Q9BRU2 100 aa6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 TPPP3Q9BW30 176 aa6.12□□□□□ -1.43
CTDNEP1-202ENST00000570380 ZNF25P17030 456 aaPredicted RBP6.11□□□□□ -1.43
CTDNEP1-202ENST00000570380 SS18Q15532 418 aa6.11□□□□□ -1.43
CTDNEP1-202ENST00000570380 TPRXLQ17RH7 258 aa6.11□□□□□ -1.43
CTDNEP1-202ENST00000570380 BAGE2Q86Y30 109 aa6.11□□□□□ -1.43
CTDNEP1-202ENST00000570380 SCO2A0A1W2PP80 73 aa6.1□□□□□ -1.43
CTDNEP1-202ENST00000570380 NCR2O95944 276 aa6.1□□□□□ -1.43
CTDNEP1-202ENST00000570380 APCSP02743 223 aa6.1□□□□□ -1.43
CTDNEP1-202ENST00000570380 RAB14P61106 215 aa6.1□□□□□ -1.43
CTDNEP1-202ENST00000570380 ALKAL2Q6UX46 152 aa6.1□□□□□ -1.43
CTDNEP1-202ENST00000570380 KRTAP7-1Q8IUC3 87 aa6.1□□□□□ -1.43
CTDNEP1-202ENST00000570380 C2orf48Q96LS8 159 aa6.1□□□□□ -1.43
CTDNEP1-202ENST00000570380 A0A087X002 238 aa6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 S100A9P06702 114 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 MALP21145 153 aa6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 EIF5AL1Q6IS14 154 aaKnown RBP6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 FAM19A5Q7Z5A7 132 aaPredicted RBP6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 GATD1Q8NB37 220 aa6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 TMEM101Q96IK0 257 aa6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 BTF3L4Q96K17 158 aa6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 GNG13Q9P2W3 67 aa6.09□□□□□ -1.43
CTDNEP1-202ENST00000570380 TRGC1P0CF51 173 aa6.08□□□□□ -1.44
CTDNEP1-202ENST00000570380 ESDP10768 282 aa6.08□□□□□ -1.44
CTDNEP1-202ENST00000570380 RNF151Q2KHN1 245 aa6.08□□□□□ -1.44
CTDNEP1-202ENST00000570380 OR2D3Q8NGH3 330 aa6.08□□□□□ -1.44
CTDNEP1-202ENST00000570380 RPL39LQ96EH5 51 aaKnown RBP6.08□□□□□ -1.44
CTDNEP1-202ENST00000570380 C19orf71A6NCJ1 209 aa6.07□□□□□ -1.44
CTDNEP1-202ENST00000570380 COX7A2LO14548 114 aa6.07□□□□□ -1.44
CTDNEP1-202ENST00000570380 ZNF861PO60384 105 aa6.07□□□□□ -1.44
CTDNEP1-202ENST00000570380 TYMSOSQ8TAI1 123 aa6.07□□□□□ -1.44
CTDNEP1-202ENST00000570380 MANBALQ9NQG1 85 aa6.07□□□□□ -1.44
CTDNEP1-202ENST00000570380 CDC42SE2Q9NRR3 84 aa6.07□□□□□ -1.44
CTDNEP1-202ENST00000570380 IGLV7-46A0A075B6I9 117 aa6.06□□□□□ -1.44
CTDNEP1-202ENST00000570380 F2Z2F3 143 aa6.06□□□□□ -1.44
CTDNEP1-202ENST00000570380 UBE2BP63146 152 aa6.06□□□□□ -1.44
CTDNEP1-202ENST00000570380 LYZL1Q6UWQ5 148 aa6.06□□□□□ -1.44
CTDNEP1-202ENST00000570380 C11orf52Q96A22 123 aa6.06□□□□□ -1.44
CTDNEP1-202ENST00000570380 KRTAP4-1Q9BYQ7 146 aa6.06□□□□□ -1.44
CTDNEP1-202ENST00000570380 SDHAF1A6NFY7 115 aa6.05□□□□□ -1.44
CTDNEP1-202ENST00000570380 M0QXV9 152 aa6.05□□□□□ -1.44
CTDNEP1-202ENST00000570380 CRYGAP11844 174 aa6.05□□□□□ -1.44
CTDNEP1-202ENST00000570380 RPS20P60866 119 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-202ENST00000570380 MRPL35Q9NZE8 188 aaKnown RBP6.05□□□□□ -1.44
CTDNEP1-202ENST00000570380 RAB19A4D1S5 217 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 C1orf196B1AJZ1 125 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 TEX46H3BTG2 121 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 TLX1NBP0CAT3 122 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 RPL35P42766 123 aaKnown RBP6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 SPAG11BQ08648 103 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 C10orf25Q5T742 122 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 C5orf38Q86SI9 138 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 IMMP2LQ96T52 175 aa6.04□□□□□ -1.44
CTDNEP1-202ENST00000570380 I3L3M4 83 aa6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 IFNA1P01562 189 aa6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 PMCHP20382 165 aa6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 BLOC1S1P78537 153 aa6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 GAGE2EQ4V326 116 aa6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 CENPWQ5EE01 88 aa6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 MRPL52Q86TS9 123 aaKnown RBP6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 GAGE2DQ9UEU5 116 aa6.03□□□□□ -1.44
CTDNEP1-202ENST00000570380 TRBV20OR9-2A0A075B6H5 130 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 TSHBP01222 138 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 S100A1P23297 94 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 TWIST1Q15672 202 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 TEX261Q6UWH6 196 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 LINC00173Q6ZV60 143 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 SVIPQ8NHG7 77 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 MRAP2Q96G30 205 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 MED9Q9NWA0 146 aa6.02□□□□□ -1.45
CTDNEP1-202ENST00000570380 PDE6DO43924 150 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 ATP6V1G1O75348 118 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 CTRLP40313 264 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 ASB16-AS1Q495Z4 193 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 PPDPFQ9H3Y8 114 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 SMDT1Q9H4I9 107 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 TMEM242Q9NWH2 141 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 C6orf48Q9UBA6 75 aa6.01□□□□□ -1.45
CTDNEP1-202ENST00000570380 TRAV13-1A0A0B4J241 112 aa6□□□□□ -1.45
CTDNEP1-202ENST00000570380 XKRY2A2RUG3 117 aa6□□□□□ -1.45
CTDNEP1-202ENST00000570380 A6NJY4 79 aa6□□□□□ -1.45
CTDNEP1-202ENST00000570380 NDUFA1O15239 70 aa6□□□□□ -1.45
CTDNEP1-202ENST00000570380 RNASE13Q5GAN3 156 aaKnown RBP6□□□□□ -1.45
CTDNEP1-202ENST00000570380 UNQ6190/PRO20217Q6UXQ8 127 aa6□□□□□ -1.45
CTDNEP1-202ENST00000570380 OR10D4PQ8NGN7 298 aa6□□□□□ -1.45
CTDNEP1-202ENST00000570380 CNFNQ9BYD5 112 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms