RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 CLPSL2Q6UWE3 100 aa6.36□□□□□ -1.39
HCCAT5-201ENST00000569990 LINC00269Q8N2A0 174 aa6.36□□□□□ -1.39
HCCAT5-201ENST00000569990 C20orf78Q9BR46 151 aa6.36□□□□□ -1.39
HCCAT5-201ENST00000569990 C1orf43Q9BWL3 253 aa6.36□□□□□ -1.39
HCCAT5-201ENST00000569990 TRAV9-1A0A075B6T8 112 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 PHOX2AO14813 284 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 NPYP01303 97 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 RPL32P62910 135 aaKnown RBP6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 REG3AQ06141 175 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 WFDC2Q14508 124 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 MIAQ16674 131 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 ORMDL3Q8N138 153 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 CLRN3Q8NCR9 226 aa6.35□□□□□ -1.39
HCCAT5-201ENST00000569990 FGF6P10767 208 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 FCER1GP30273 86 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 FUSP35637 526 aaKnown RBP eCLIP6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 AMMECR1LQ6DCA0 310 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 CDPF1Q6NVV7 123 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 KRTAP26-1Q6PEX3 210 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 TMEM136Q6ZRR5 245 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 Q8N814 137 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 KIR2DL4Q99706 377 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 SMIM2Q9BVW6 85 aa6.34□□□□□ -1.39
HCCAT5-201ENST00000569990 LECT2O14960 151 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 APOC3P02656 99 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 ZNF25P17030 456 aaPredicted RBP6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 S100PP25815 95 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 MAJINQ3KP22 176 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 RNASEKQ6P5S7 137 aaKnown RBP6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 BAALCQ8WXS3 180 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 PRELID3AQ96N28 172 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 RPS10P5Q9NQ39 176 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 LRP1BQ9NZR2 4599 aa6.33□□□□□ -1.4
HCCAT5-201ENST00000569990 TRAV8-4A0A0B4J246 113 aa6.32□□□□□ -1.4
HCCAT5-201ENST00000569990 TCAPO15273 167 aa6.32□□□□□ -1.4
HCCAT5-201ENST00000569990 MRPL52Q86TS9 123 aaKnown RBP6.32□□□□□ -1.4
HCCAT5-201ENST00000569990 SVBPQ8N300 66 aa6.32□□□□□ -1.4
HCCAT5-201ENST00000569990 NTN5Q8WTR8 489 aaPredicted RBP6.32□□□□□ -1.4
HCCAT5-201ENST00000569990 LAMTOR2Q9Y2Q5 125 aa6.32□□□□□ -1.4
HCCAT5-201ENST00000569990 DNAH5Q8TE73 4624 aa6.32□□□□□ -1.4
HCCAT5-201ENST00000569990 IGLV10-54A0A075B6I4 117 aa6.31□□□□□ -1.4
HCCAT5-201ENST00000569990 SNAPINO95295 136 aa6.31□□□□□ -1.4
HCCAT5-201ENST00000569990 HLA-DQA1P01909 254 aa6.31□□□□□ -1.4
HCCAT5-201ENST00000569990 OR5A1Q8NGJ0 315 aa6.31□□□□□ -1.4
HCCAT5-201ENST00000569990 TMEM101Q96IK0 257 aa6.31□□□□□ -1.4
HCCAT5-201ENST00000569990 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
HCCAT5-201ENST00000569990 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
HCCAT5-201ENST00000569990 GNB1LQ9BYB4 327 aa6.3□□□□□ -1.4
HCCAT5-201ENST00000569990 MAP1LC3AQ9H492 121 aa6.3□□□□□ -1.4
HCCAT5-201ENST00000569990 CDC42SE2Q9NRR3 84 aa6.3□□□□□ -1.4
HCCAT5-201ENST00000569990 UBE2D4Q9Y2X8 147 aa6.3□□□□□ -1.4
HCCAT5-201ENST00000569990 CSDC2Q9Y534 153 aaKnown RBP6.3□□□□□ -1.4
HCCAT5-201ENST00000569990 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 IGKV3OR2-268A0A0C4DH90 116 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 LOC389332A0A1B0GUA5 103 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 USP17L23D6RBM5 183 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 KRTAP10-1P60331 282 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 SMAGPQ0VAQ4 97 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 KIAA1644Q3SXP7 199 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 COX19Q49B96 90 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 ZNF664Q8N3J9 261 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 TMEM18Q96B42 140 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 TIMM21Q9BVV7 248 aa6.29□□□□□ -1.4
HCCAT5-201ENST00000569990 RAB5AP20339 215 aa6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 GCSHP23434 173 aa6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 PCP4P48539 62 aa6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 RPL39P62891 51 aaKnown RBP6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 C14orf177Q52M58 125 aa6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 DGAT2L7PQ6IED9 249 aa6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 Q8N8P6 123 aa6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 KIAA1109Q2LD37 5005 aa6.28□□□□□ -1.4
HCCAT5-201ENST00000569990 TGIF2-C20orf24A0A0A6YYL0 155 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 LINC00959A0A1B0GUT2 108 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 GAGE12HA6NDE8 117 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 HSBP1L1C9JCN9 74 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 MT-ND6P03923 174 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 Q6ZUT4 128 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 CHCHD10Q8WYQ3 142 aaPredicted RBP6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 SPANXA1Q9NS26 97 aa6.27□□□□□ -1.41
HCCAT5-201ENST00000569990 APOBP04114 4563 aaKnown RBP6.26□□□□□ -1.41
HCCAT5-201ENST00000569990 K7EMI3 77 aa6.26□□□□□ -1.41
HCCAT5-201ENST00000569990 PRSS1P07477 247 aa6.26□□□□□ -1.41
HCCAT5-201ENST00000569990 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
HCCAT5-201ENST00000569990 FAM104AQ969W3 186 aa6.26□□□□□ -1.41
HCCAT5-201ENST00000569990 ALKBH7Q9BT30 221 aaPredicted RBP6.26□□□□□ -1.41
HCCAT5-201ENST00000569990 NXT2Q9NPJ8 142 aaKnown RBP6.26□□□□□ -1.41
HCCAT5-201ENST00000569990 HSPG2P98160 4391 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 CCL25O15444 150 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 IFI27P40305 119 aaPredicted RBP6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 XCL1P47992 114 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 MRPS36P82909 103 aaKnown RBP6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 FABP9Q0Z7S8 132 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 FOXI1Q12951 378 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 SS18Q15532 418 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 ORMDL2Q53FV1 153 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 LCE4AQ5TA78 99 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 YPEL4Q96NS1 127 aa6.25□□□□□ -1.41
HCCAT5-201ENST00000569990 LINC00518Q8N0U6 118 aa6.24□□□□□ -1.41
HCCAT5-201ENST00000569990 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms