RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ZNF664Q8N3J9 261 aa11.2□□□□□ -0.62
COMMD4-224ENST00000568877 RMI2Q96E14 147 aa11.2□□□□□ -0.62
COMMD4-224ENST00000568877 SPANXA1Q9NS26 97 aa11.2□□□□□ -0.62
COMMD4-224ENST00000568877 CYSLTR1Q9Y271 337 aa11.2□□□□□ -0.62
COMMD4-224ENST00000568877 LINC00614P0C842 121 aa11.19□□□□□ -0.62
COMMD4-224ENST00000568877 RAB5BP61020 215 aa11.19□□□□□ -0.62
COMMD4-224ENST00000568877 C2orf66Q6UXQ4 117 aa11.19□□□□□ -0.62
COMMD4-224ENST00000568877 LINC00336Q6ZUF6 198 aa11.19□□□□□ -0.62
COMMD4-224ENST00000568877 URB1-AS1Q96HZ7 61 aa11.19□□□□□ -0.62
COMMD4-224ENST00000568877 TM2D2Q9BX73 214 aa11.19□□□□□ -0.62
COMMD4-224ENST00000568877 AP5S1Q9NUS5 200 aa11.19□□□□□ -0.62
COMMD4-224ENST00000568877 FAT2Q9NYQ8 4349 aa11.18□□□□□ -0.62
COMMD4-224ENST00000568877 IGKV2D-24A0A075B6R9 120 aa11.18□□□□□ -0.62
COMMD4-224ENST00000568877 PYGO1Q9Y3Y4 419 aa11.18□□□□□ -0.62
COMMD4-224ENST00000568877 COX11Q9Y6N1 276 aa11.18□□□□□ -0.62
COMMD4-224ENST00000568877 IGKV3OR2-268A0A0C4DH90 116 aa11.17□□□□□ -0.62
COMMD4-224ENST00000568877 C1orf43Q9BWL3 253 aa11.17□□□□□ -0.62
COMMD4-224ENST00000568877 TRAV8-4A0A0B4J246 113 aa11.16□□□□□ -0.62
COMMD4-224ENST00000568877 PRSS29PA6NIE9 313 aa11.16□□□□□ -0.62
COMMD4-224ENST00000568877 PSCAO43653 123 aa11.16□□□□□ -0.62
COMMD4-224ENST00000568877 MRPS36P82909 103 aaKnown RBP11.16□□□□□ -0.62
COMMD4-224ENST00000568877 Q6ZUT4 128 aa11.16□□□□□ -0.62
COMMD4-224ENST00000568877 TOMM6Q96B49 74 aa11.16□□□□□ -0.62
COMMD4-224ENST00000568877 OPRPNQ99935 248 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-224ENST00000568877 TNP2Q05952 138 aa11.15□□□□□ -0.62
COMMD4-224ENST00000568877 RNASE13Q5GAN3 156 aaKnown RBP11.15□□□□□ -0.62
COMMD4-224ENST00000568877 FAM104AQ969W3 186 aa11.15□□□□□ -0.62
COMMD4-224ENST00000568877 IGLV10-54A0A075B6I4 117 aa11.14□□□□□ -0.63
COMMD4-224ENST00000568877 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
COMMD4-224ENST00000568877 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
COMMD4-224ENST00000568877 BAGE3Q86Y29 109 aa11.14□□□□□ -0.63
COMMD4-224ENST00000568877 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
COMMD4-224ENST00000568877 IGLV4-3A0A075B6K6 122 aa11.13□□□□□ -0.63
COMMD4-224ENST00000568877 LINC00959A0A1B0GUT2 108 aa11.13□□□□□ -0.63
COMMD4-224ENST00000568877 NPSP0C0P6 89 aa11.12□□□□□ -0.63
COMMD4-224ENST00000568877 KRTAP26-1Q6PEX3 210 aa11.12□□□□□ -0.63
COMMD4-224ENST00000568877 ERASQ7Z444 233 aa11.12□□□□□ -0.63
COMMD4-224ENST00000568877 MAPKAPK5-AS1Q8N8E1 139 aa11.12□□□□□ -0.63
COMMD4-224ENST00000568877 SCGB3A1Q96QR1 104 aa11.12□□□□□ -0.63
COMMD4-224ENST00000568877 TIMM17AQ99595 171 aa11.12□□□□□ -0.63
COMMD4-224ENST00000568877 A0A096LNJ9 63 aa11.11□□□□□ -0.63
COMMD4-224ENST00000568877 HBDP02042 147 aa11.11□□□□□ -0.63
COMMD4-224ENST00000568877 SS18Q15532 418 aa11.11□□□□□ -0.63
COMMD4-224ENST00000568877 PMCHL1Q16048 86 aa11.11□□□□□ -0.63
COMMD4-224ENST00000568877 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
COMMD4-224ENST00000568877 TRAV13-1A0A0B4J241 112 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 LRCOL1A6NCL2 159 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 CCL25O15444 150 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BKO60814 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BJP06899 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BOP23527 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BBP33778 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BDP58876 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BCP62807 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST2H2BEQ16778 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-224ENST00000568877 Q6ZN92 141 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 CHCHD10Q8WYQ3 142 aaPredicted RBP11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BHQ93079 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BNQ99877 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 HIST1H2BMQ99879 126 aa11.1□□□□□ -0.63
COMMD4-224ENST00000568877 DNAH11Q96DT5 4516 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 A0A087WTM6 91 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 GAGE12HA6NDE8 117 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 IFITM10A6NMD0 228 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 C1orf196B1AJZ1 125 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 TEX43Q6ZNM6 134 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 BAALCQ8WXS3 180 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 VCX2Q9H322 139 aa11.09□□□□□ -0.63
COMMD4-224ENST00000568877 HSBP1O75506 76 aa11.08□□□□□ -0.64
COMMD4-224ENST00000568877 SERF1AO75920 110 aa11.08□□□□□ -0.64
COMMD4-224ENST00000568877 XCL1P47992 114 aa11.08□□□□□ -0.64
COMMD4-224ENST00000568877 AMELXQ99217 191 aa11.08□□□□□ -0.64
COMMD4-224ENST00000568877 PKD1P98161 4303 aa11.08□□□□□ -0.64
COMMD4-224ENST00000568877 EREGO14944 169 aa11.07□□□□□ -0.64
COMMD4-224ENST00000568877 LINC00310P59036 64 aa11.07□□□□□ -0.64
COMMD4-224ENST00000568877 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
COMMD4-224ENST00000568877 ZC2HC1BQ5TFG8 222 aa11.07□□□□□ -0.64
COMMD4-224ENST00000568877 LINC00173Q6ZV60 143 aa11.07□□□□□ -0.64
COMMD4-224ENST00000568877 C2orf88Q9BSF0 95 aa11.07□□□□□ -0.64
COMMD4-224ENST00000568877 A0A1B0GVY2 172 aa11.06□□□□□ -0.64
COMMD4-224ENST00000568877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
COMMD4-224ENST00000568877 LECT2O14960 151 aa11.06□□□□□ -0.64
COMMD4-224ENST00000568877 FOXI1Q12951 378 aa11.06□□□□□ -0.64
COMMD4-224ENST00000568877 WFDC2Q14508 124 aa11.06□□□□□ -0.64
COMMD4-224ENST00000568877 CD164L2Q6UWJ8 174 aa11.06□□□□□ -0.64
COMMD4-224ENST00000568877 NUPR1O60356 82 aa11.05□□□□□ -0.64
COMMD4-224ENST00000568877 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
COMMD4-224ENST00000568877 ATP5LO75964 103 aa11.04□□□□□ -0.64
COMMD4-224ENST00000568877 UBE2D1P51668 147 aa11.04□□□□□ -0.64
COMMD4-224ENST00000568877 USP17L23D6RBM5 183 aa11.03□□□□□ -0.64
COMMD4-224ENST00000568877 Q8N814 137 aa11.03□□□□□ -0.64
COMMD4-224ENST00000568877 LINC00242Q5T6M2 205 aa11.02□□□□□ -0.65
COMMD4-224ENST00000568877 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
COMMD4-224ENST00000568877 PMVKQ15126 192 aa11.01□□□□□ -0.65
COMMD4-224ENST00000568877 C14orf177Q52M58 125 aa11.01□□□□□ -0.65
COMMD4-224ENST00000568877 HECTD4Q9Y4D8 3996 aa11□□□□□ -0.65
COMMD4-224ENST00000568877 COX7A2LO14548 114 aa11□□□□□ -0.65
COMMD4-224ENST00000568877 NDUFA6P56556 154 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms