RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 HBDP02042 147 aa6.92□□□□□ -1.3
HERPUD1-216ENST00000568814 CRPP02741 224 aa6.92□□□□□ -1.3
HERPUD1-216ENST00000568814 ANGP03950 147 aaKnown RBP6.92□□□□□ -1.3
HERPUD1-216ENST00000568814 PAPPA-AS1Q5QFB9 102 aa6.92□□□□□ -1.3
HERPUD1-216ENST00000568814 Q8N976 141 aa6.92□□□□□ -1.3
HERPUD1-216ENST00000568814 ALMS1Q8TCU4 4167 aa6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 IGLV4-60A0A075B6I1 120 aa6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 TRAV8-3A0A0A6YYJ7 113 aa6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 MRPS36P82909 103 aaKnown RBP6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 Q6ZR54 194 aa6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 Q8N3U1 123 aa6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 TIMM17AQ99595 171 aa6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 KLK12Q9UKR0 248 aa6.91□□□□□ -1.3
HERPUD1-216ENST00000568814 COA6Q5JTJ3 125 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 Q6ZN92 141 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 ERASQ7Z444 233 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 NFE4Q86UQ8 179 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 ZNF664Q8N3J9 261 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 RMI2Q96E14 147 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 TMEM141Q96I45 108 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 CDC42SE2Q9NRR3 84 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 PRR34Q9NV39 138 aa6.9□□□□□ -1.3
HERPUD1-216ENST00000568814 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.31
HERPUD1-216ENST00000568814 A0A096LNJ9 63 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 IGIPA6NJ69 53 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 ATP5LO75964 103 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 LINC00310P59036 64 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 REG3AQ06141 175 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 MIAQ16674 131 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 Q6ZUT4 128 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 UBE2WQ96B02 151 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 KRTAP1-5Q9BYS1 174 aa6.89□□□□□ -1.31
HERPUD1-216ENST00000568814 IGLV4-3A0A075B6K6 122 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 TRAV8-4A0A0B4J246 113 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 M0R2N4 97 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 CCL25O15444 150 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 NDUFA6P56556 154 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 PMCHL1Q16048 86 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 PDZD11Q5EBL8 140 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 COX11Q9Y6N1 276 aa6.88□□□□□ -1.31
HERPUD1-216ENST00000568814 S100A6P06703 90 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 C1orf134Q5TEV5 83 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 ENHOQ6UWT2 76 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 TEX43Q6ZNM6 134 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 C6orf223Q8N319 242 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 FAM19A2Q8N3H0 131 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 PACRGQ96M98 296 aaPredicted RBP6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 C2orf88Q9BSF0 95 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 TM2D2Q9BX73 214 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 VCX2Q9H322 139 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 Q9HAA7 133 aa6.87□□□□□ -1.31
HERPUD1-216ENST00000568814 IFITM10A6NMD0 228 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 NUPR1O60356 82 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 LEPROTL1O95214 131 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 SS18Q15532 418 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 CLPSL2Q6UWE3 100 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 AMELXQ99217 191 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 C1orf43Q9BWL3 253 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 HSPB8Q9UJY1 196 aa6.86□□□□□ -1.31
HERPUD1-216ENST00000568814 VPS13DQ5THJ4 4388 aa6.85□□□□□ -1.31
HERPUD1-216ENST00000568814 IGKV3OR2-268A0A0C4DH90 116 aa6.85□□□□□ -1.31
HERPUD1-216ENST00000568814 LINC00959A0A1B0GUT2 108 aa6.85□□□□□ -1.31
HERPUD1-216ENST00000568814 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
HERPUD1-216ENST00000568814 FAM104AQ969W3 186 aa6.85□□□□□ -1.31
HERPUD1-216ENST00000568814 IGKV2D-24A0A075B6R9 120 aa6.84□□□□□ -1.31
HERPUD1-216ENST00000568814 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
HERPUD1-216ENST00000568814 PMVKQ15126 192 aa6.84□□□□□ -1.31
HERPUD1-216ENST00000568814 LINC00173Q6ZV60 143 aa6.84□□□□□ -1.31
HERPUD1-216ENST00000568814 BAALCQ8WXS3 180 aa6.84□□□□□ -1.31
HERPUD1-216ENST00000568814 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
HERPUD1-216ENST00000568814 PSCAO43653 123 aa6.83□□□□□ -1.32
HERPUD1-216ENST00000568814 SEC11AP67812 179 aa6.83□□□□□ -1.32
HERPUD1-216ENST00000568814 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
HERPUD1-216ENST00000568814 IGLV10-54A0A075B6I4 117 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 TRAV12-1A0A0B4J245 112 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 PRSS1P07477 247 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 FABP4P15090 132 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 S100A2P29034 98 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 UBE2D1P51668 147 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 Q6ZRN7 208 aaPredicted RBP6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 FAM19A3Q7Z5A8 133 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 CST9LQ9H4G1 147 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 FRAS1Q86XX4 4008 aa6.82□□□□□ -1.32
HERPUD1-216ENST00000568814 XCL1P47992 114 aa6.81□□□□□ -1.32
HERPUD1-216ENST00000568814 HERVK_113P63121 156 aa6.81□□□□□ -1.32
HERPUD1-216ENST00000568814 CD164L2Q6UWJ8 174 aa6.81□□□□□ -1.32
HERPUD1-216ENST00000568814 HIST3H2BBQ8N257 126 aa6.81□□□□□ -1.32
HERPUD1-216ENST00000568814 MAP1LC3CQ9BXW4 147 aa6.81□□□□□ -1.32
HERPUD1-216ENST00000568814 DNAH6Q9C0G6 4158 aa6.8□□□□□ -1.32
HERPUD1-216ENST00000568814 GAGE12HA6NDE8 117 aa6.8□□□□□ -1.32
HERPUD1-216ENST00000568814 PRSS29PA6NIE9 313 aa6.8□□□□□ -1.32
HERPUD1-216ENST00000568814 LINC00242Q5T6M2 205 aa6.8□□□□□ -1.32
HERPUD1-216ENST00000568814 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
HERPUD1-216ENST00000568814 LINC00336Q6ZUF6 198 aa6.8□□□□□ -1.32
HERPUD1-216ENST00000568814 TINCRA0A1B0GVN0 87 aa6.79□□□□□ -1.32
HERPUD1-216ENST00000568814 C5orf52A6NGY3 159 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms