RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 FAM240BA0A1B0GVZ2 78 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 UBE2L6O14933 153 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 MPC2O95563 127 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 MT-ND6P03923 174 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 SMIM17P0DL12 118 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 UBE2G2P60604 165 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 C1orf137Q5JT78 98 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 Q8N377 158 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 LINC00526Q96FQ7 95 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 PKIGQ9Y2B9 76 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 ZFP30Q9Y2G7 519 aa3.37□□□□□ -1.87
CDH13-211ENST00000568770 A0A1W2PNN7 141 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 M0QY20 66 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 PET100P0DJ07 73 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 ATP6V0CP27449 155 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 NKX2-5P52952 324 aaPredicted RBP3.36□□□□□ -1.87
CDH13-211ENST00000568770 SPANXN1Q5VSR9 72 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 FER1L6-AS1Q8NA97 138 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 CHCHD10Q8WYQ3 142 aaPredicted RBP3.36□□□□□ -1.87
CDH13-211ENST00000568770 DIRC1Q969H9 104 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 HIST1H2BAQ96A08 127 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 C11orf52Q96A22 123 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 FMC1Q96HJ9 113 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 CARD19Q96LW7 228 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 ACTR3CQ9C0K3 210 aaPredicted RBP3.36□□□□□ -1.87
CDH13-211ENST00000568770 CRCT1Q9UGL9 99 aa3.36□□□□□ -1.87
CDH13-211ENST00000568770 IGLV1-50A0A075B6I6 118 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 FAM74A7A6NL05 159 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 H0Y9J4 135 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 SNAI2O43623 268 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 LTAP01374 205 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 MBP02144 154 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 IGLV7-43P04211 117 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 MGPP08493 103 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 OR5AL1P0C617 328 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 UBE2G1P62253 170 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
CDH13-211ENST00000568770 AP1S3Q96PC3 154 aa3.35□□□□□ -1.87
CDH13-211ENST00000568770 PSMG3Q9BT73 122 aaPredicted RBP3.35□□□□□ -1.87
CDH13-211ENST00000568770 IGLV4-3A0A075B6K6 122 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 LOC107984640A0A0U1RRK4 108 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 CXCL1P09341 107 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 XCL1P47992 114 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 UBE2D1P51668 147 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 NDUFV3P56181 108 aaKnown RBP3.34□□□□□ -1.87
CDH13-211ENST00000568770 SERF2P84101 59 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 SYCNQ0VAF6 134 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 ZNF726P1Q15940 193 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 PGLYRP4Q96LB8 373 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 NKX6-2Q9C056 277 aaPredicted RBP3.34□□□□□ -1.87
CDH13-211ENST00000568770 TNFSF18Q9UNG2 199 aa3.34□□□□□ -1.87
CDH13-211ENST00000568770 TRAV1-1A0A0B4J248 108 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 IGHV1-58A0A0C4DH39 117 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 TSPAN13O95857 204 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 KRTAP1-4P0C5Y4 121 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 BCL2P10415 239 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 DSCR10P59022 87 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 COTL1Q14019 142 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 C9orf116Q5BN46 136 aaPredicted RBP3.33□□□□□ -1.88
CDH13-211ENST00000568770 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 AMMECR1LQ6DCA0 310 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 RASL11AQ6T310 242 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 NIT2Q9NQR4 276 aa3.33□□□□□ -1.88
CDH13-211ENST00000568770 CTXND1A0A1B0GTU2 59 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 CCL25O15444 150 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 SSNA1O43805 119 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 FGF6P10767 208 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 RPL13AP40429 203 aaKnown RBP3.32□□□□□ -1.88
CDH13-211ENST00000568770 AKR1C3P42330 323 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 EIF5AP63241 154 aaKnown RBP3.32□□□□□ -1.88
CDH13-211ENST00000568770 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 RNASEKQ6P5S7 137 aaKnown RBP3.32□□□□□ -1.88
CDH13-211ENST00000568770 KRTAP11-1Q8IUC1 163 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 OR5A1Q8NGJ0 315 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 STOML3Q8TAV4 291 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 ENKURQ8TC29 256 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 CCDC32Q9BV29 185 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 TPPP3Q9BW30 176 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 RPS10P5Q9NQ39 176 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 MUC17Q685J3 4493 aa3.32□□□□□ -1.88
CDH13-211ENST00000568770 IGLV4-69A0A075B6H9 119 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.31□□□□□ -1.88
CDH13-211ENST00000568770 LINC00959A0A1B0GUT2 108 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 IGKV2-29A2NJV5 120 aaPredicted RBP3.31□□□□□ -1.88
CDH13-211ENST00000568770 INMT-MINDY4F8WBC2 141 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.31□□□□□ -1.88
CDH13-211ENST00000568770 APOMO95445 188 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 NTF3P20783 257 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 MEF2BQ02080 365 aaPredicted RBP3.31□□□□□ -1.88
CDH13-211ENST00000568770 RPL18AQ02543 176 aaKnown RBP3.31□□□□□ -1.88
CDH13-211ENST00000568770 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 NUP35Q8NFH5 326 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 ISOC2Q96AB3 205 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 TCEAL7Q9BRU2 100 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 MED28Q9H204 178 aa3.31□□□□□ -1.88
CDH13-211ENST00000568770 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
CDH13-211ENST00000568770 RPL37AP8A6NKH3 93 aa3.3□□□□□ -1.88
CDH13-211ENST00000568770 S100A9P06702 114 aaKnown RBP3.3□□□□□ -1.88
CDH13-211ENST00000568770 IGLC6P0CF74 106 aa3.3□□□□□ -1.88
CDH13-211ENST00000568770 FHITP49789 147 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms