RNA–Protein interactions for RNA: ENST00000567909.1

GINS3-209, Transcript of GINS complex subunit 3, humanhuman

TSL 3

Gene GINS3, Length 210 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-209ENST00000567909 PGPEP1Q9NXJ5 209 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 LAMTOR2Q9Y2Q5 125 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 DNAH5Q8TE73 4624 aa8.42□□□□□ -1.06
GINS3-209ENST00000567909 SCO1O75880 301 aa8.41□□□□□ -1.06
GINS3-209ENST00000567909 DGAT2L7PQ6IED9 249 aa8.41□□□□□ -1.06
GINS3-209ENST00000567909 TGIF2-C20orf24A0A0A6YYL0 155 aa8.4□□□□□ -1.06
GINS3-209ENST00000567909 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
GINS3-209ENST00000567909 COLCA2A8K830 154 aa8.4□□□□□ -1.06
GINS3-209ENST00000567909 RAB5AP20339 215 aa8.4□□□□□ -1.06
GINS3-209ENST00000567909 MRPL52Q86TS9 123 aaKnown RBP8.4□□□□□ -1.06
GINS3-209ENST00000567909 TMEM18Q96B42 140 aa8.4□□□□□ -1.06
GINS3-209ENST00000567909 GNB1LQ9BYB4 327 aa8.4□□□□□ -1.06
GINS3-209ENST00000567909 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.39□□□□□ -1.07
GINS3-209ENST00000567909 IGLV5-52A0A0A0MRZ9 124 aa8.39□□□□□ -1.07
GINS3-209ENST00000567909 RPL39P62891 51 aaKnown RBP8.39□□□□□ -1.07
GINS3-209ENST00000567909 SMAGPQ0VAQ4 97 aa8.39□□□□□ -1.07
GINS3-209ENST00000567909 CDPF1Q6NVV7 123 aa8.39□□□□□ -1.07
GINS3-209ENST00000567909 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
GINS3-209ENST00000567909 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 FABP9Q0Z7S8 132 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 KRTAP26-1Q6PEX3 210 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 ZNF664Q8N3J9 261 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 Q8N8P6 123 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 MRPL18Q9H0U6 180 aaKnown RBP8.38□□□□□ -1.07
GINS3-209ENST00000567909 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 UBE2D4Q9Y2X8 147 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 KIAA1109Q2LD37 5005 aa8.38□□□□□ -1.07
GINS3-209ENST00000567909 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
GINS3-209ENST00000567909 C1orf196B1AJZ1 125 aa8.37□□□□□ -1.07
GINS3-209ENST00000567909 USP17L23D6RBM5 183 aa8.37□□□□□ -1.07
GINS3-209ENST00000567909 RNASE13Q5GAN3 156 aaKnown RBP8.37□□□□□ -1.07
GINS3-209ENST00000567909 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
GINS3-209ENST00000567909 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
GINS3-209ENST00000567909 YPEL4Q96NS1 127 aa8.37□□□□□ -1.07
GINS3-209ENST00000567909 GCSHP23434 173 aa8.36□□□□□ -1.07
GINS3-209ENST00000567909 IFI27P40305 119 aaPredicted RBP8.36□□□□□ -1.07
GINS3-209ENST00000567909 C14orf177Q52M58 125 aa8.36□□□□□ -1.07
GINS3-209ENST00000567909 Q6ZUT4 128 aa8.36□□□□□ -1.07
GINS3-209ENST00000567909 CSDC2Q9Y534 153 aaKnown RBP8.36□□□□□ -1.07
GINS3-209ENST00000567909 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
GINS3-209ENST00000567909 XCL1P47992 114 aa8.35□□□□□ -1.07
GINS3-209ENST00000567909 RAB5BP61020 215 aa8.35□□□□□ -1.07
GINS3-209ENST00000567909 SS18Q15532 418 aa8.35□□□□□ -1.07
GINS3-209ENST00000567909 ALKBH7Q9BT30 221 aaPredicted RBP8.35□□□□□ -1.07
GINS3-209ENST00000567909 TIMM21Q9BVV7 248 aa8.35□□□□□ -1.07
GINS3-209ENST00000567909 NXT2Q9NPJ8 142 aaKnown RBP8.35□□□□□ -1.07
GINS3-209ENST00000567909 TRAPPC1Q9Y5R8 145 aa8.35□□□□□ -1.07
GINS3-209ENST00000567909 CCL25O15444 150 aa8.34□□□□□ -1.07
GINS3-209ENST00000567909 KRTAP10-1P60331 282 aa8.34□□□□□ -1.07
GINS3-209ENST00000567909 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
GINS3-209ENST00000567909 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
GINS3-209ENST00000567909 SPANXA1Q9NS26 97 aa8.34□□□□□ -1.07
GINS3-209ENST00000567909 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
GINS3-209ENST00000567909 PRSS1P07477 247 aa8.33□□□□□ -1.08
GINS3-209ENST00000567909 ORMDL2Q53FV1 153 aa8.33□□□□□ -1.08
GINS3-209ENST00000567909 K7EMI3 77 aa8.32□□□□□ -1.08
GINS3-209ENST00000567909 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
GINS3-209ENST00000567909 C2orf66Q6UXQ4 117 aa8.32□□□□□ -1.08
GINS3-209ENST00000567909 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
GINS3-209ENST00000567909 APOBP04114 4563 aaKnown RBP8.32□□□□□ -1.08
GINS3-209ENST00000567909 hDV102S1A0JD36 115 aa8.31□□□□□ -1.08
GINS3-209ENST00000567909 FOXI1Q12951 378 aa8.31□□□□□ -1.08
GINS3-209ENST00000567909 RYR1P21817 5038 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 IFITM10A6NMD0 228 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 S100A6P06703 90 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 MRPS36P82909 103 aaKnown RBP8.3□□□□□ -1.08
GINS3-209ENST00000567909 CFAP161Q6P656 301 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 CD164L2Q6UWJ8 174 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 FA2HQ7L5A8 372 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 FAM104AQ969W3 186 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 PYGO1Q9Y3Y4 419 aa8.3□□□□□ -1.08
GINS3-209ENST00000567909 HSPG2P98160 4391 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 IGLV4-3A0A075B6K6 122 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 CDK2AP2O75956 126 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 TRGC2P03986 189 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 HIGD2BQ4VC39 106 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 C15orf56Q8N910 161 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 TMEM141Q96I45 108 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 AP5S1Q9NUS5 200 aa8.29□□□□□ -1.08
GINS3-209ENST00000567909 G0S2P27469 103 aa8.28□□□□□ -1.08
GINS3-209ENST00000567909 C18orf32Q8TCD1 76 aa8.28□□□□□ -1.08
GINS3-209ENST00000567909 DNAH8Q96JB1 4490 aa8.28□□□□□ -1.08
GINS3-209ENST00000567909 HERC2O95714 4834 aa8.27□□□□□ -1.08
GINS3-209ENST00000567909 COX7A2LO14548 114 aa8.27□□□□□ -1.09
GINS3-209ENST00000567909 MALP21145 153 aa8.27□□□□□ -1.09
GINS3-209ENST00000567909 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
GINS3-209ENST00000567909 Q6ZN92 141 aa8.27□□□□□ -1.09
GINS3-209ENST00000567909 TEX43Q6ZNM6 134 aa8.27□□□□□ -1.09
GINS3-209ENST00000567909 IGHV1-58A0A0C4DH39 117 aa8.26□□□□□ -1.09
GINS3-209ENST00000567909 IGIPA6NJ69 53 aa8.26□□□□□ -1.09
GINS3-209ENST00000567909 HAMPP81172 84 aa8.26□□□□□ -1.09
GINS3-209ENST00000567909 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
GINS3-209ENST00000567909 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
GINS3-209ENST00000567909 SCGB3A1Q96QR1 104 aa8.26□□□□□ -1.09
GINS3-209ENST00000567909 VCX2Q9H322 139 aa8.26□□□□□ -1.09
GINS3-209ENST00000567909 GVQW2A0A096LPI5 108 aaPredicted RBP8.25□□□□□ -1.09
GINS3-209ENST00000567909 LINC01546A6NGU7 62 aa8.25□□□□□ -1.09
GINS3-209ENST00000567909 LINC00526Q96FQ7 95 aa8.25□□□□□ -1.09
GINS3-209ENST00000567909 C2orf88Q9BSF0 95 aa8.25□□□□□ -1.09
GINS3-209ENST00000567909 FAM30AQ9NZY2 134 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms