RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 Q6ZVH6 145 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 HIST1H4GQ99525 98 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 LINC00467Q9BRT7 94 aa3.84□□□□□ -1.79
CAPN3-217ENST00000567817 RYR2Q92736 4967 aa3.84□□□□□ -1.8
CAPN3-217ENST00000567817 WNK2Q9Y3S1 2297 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 TRBV7-3A0A075B6L6 115 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 TRAV12-3A0A0B4J271 114 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 TRAV25A0A0B4J276 109 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 A8MTW9 85 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 F6UB75 175 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 G3V4G9 280 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 I3L3M4 83 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 M0QY20 66 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 ZNF688P0C7X2 276 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 CMC4P56277 68 aaPredicted RBP3.83□□□□□ -1.8
CAPN3-217ENST00000567817 SMAGPQ0VAQ4 97 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 ZNF876PQ49A33 203 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 SCGB1D4Q6XE38 83 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 RPL39LQ96EH5 51 aaKnown RBP3.83□□□□□ -1.8
CAPN3-217ENST00000567817 DUX3Q96PT4 197 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 SPAG8Q99932 426 aaPredicted RBP3.83□□□□□ -1.8
CAPN3-217ENST00000567817 PRADC1Q9BSG0 188 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 SPANXB1Q9NS25 103 aaPredicted RBP3.83□□□□□ -1.8
CAPN3-217ENST00000567817 TP73-AS1Q9UF72 201 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 TP53TG1Q9Y2A0 90 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 PYGO1Q9Y3Y4 419 aa3.83□□□□□ -1.8
CAPN3-217ENST00000567817 IGKV3-7A0A075B6H7 116 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 ZNF815PA8K554 130 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 FXYD2P54710 66 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 SYNJ2BPP57105 145 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 ZNF415Q09FC8 603 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 ZNF56Q15929 161 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 RRN3P1Q2M238 152 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 C12orf74Q32Q52 190 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 NEGR1Q7Z3B1 354 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 RNASE8Q8TDE3 154 aaKnown RBP3.82□□□□□ -1.8
CAPN3-217ENST00000567817 PHLDA1Q8WV24 401 aaPredicted RBP3.82□□□□□ -1.8
CAPN3-217ENST00000567817 C4orf3Q8WVX3 66 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 DNAJC30Q96LL9 226 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 VPS25Q9BRG1 176 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 ZNF702PQ9H963 129 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 NHP2Q9NX24 153 aaKnown RBP3.82□□□□□ -1.8
CAPN3-217ENST00000567817 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
CAPN3-217ENST00000567817 TRBV20-1A0A075B6N2 111 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 IGLL5B9A064 214 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 M0R2P5 195 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 CRYGDP07320 174 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 LGALS3P17931 250 aaKnown RBP3.81□□□□□ -1.8
CAPN3-217ENST00000567817 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
CAPN3-217ENST00000567817 COTL1Q14019 142 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 TCTEX1D4Q5JR98 221 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 AMTNQ6UX39 209 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 Q6ZQT7 251 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 RAB37Q96AX2 223 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 PLEKHB2Q96CS7 222 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 B9D2Q9BPU9 175 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 SPXQ9BT56 116 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 VCX2Q9H322 139 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 ARHGAP32A7KAX9 2087 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
CAPN3-217ENST00000567817 DYNC2H1Q8NCM8 4307 aaKnown RBP3.8□□□□□ -1.8
CAPN3-217ENST00000567817 IGLV4-69A0A075B6H9 119 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.8□□□□□ -1.8
CAPN3-217ENST00000567817 LCE6AA0A183 80 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 TMEM238C9JI98 176 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 LEPROTO15243 131 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 CIDEAO60543 219 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 INSP01308 110 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 UBE2D1P51668 147 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
CAPN3-217ENST00000567817 SPINK13Q1W4C9 94 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 FAM74A4Q5TZK3 123 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 SLC25A29Q8N8R3 303 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 ATP6V0E2Q8NHE4 81 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 LINC01006Q8NI28 216 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 DYNLRB2Q8TF09 96 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 DLX4Q92988 240 aaPredicted RBP3.8□□□□□ -1.8
CAPN3-217ENST00000567817 C16orf95Q9H693 158 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 SPANXA1Q9NS26 97 aa3.8□□□□□ -1.8
CAPN3-217ENST00000567817 MRPL16Q9NX20 251 aaKnown RBP3.8□□□□□ -1.8
CAPN3-217ENST00000567817 HYDINQ4G0P3 5121 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 A0A0J9YY99 117 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 H3BMM0 161 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 J3QQQ9 107 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 TSHBP01222 138 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 PRB2P02812 416 aaPredicted RBP3.79□□□□□ -1.8
CAPN3-217ENST00000567817 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 CFC1P0CG37 223 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 TCTAP57738 103 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 DEFB131AP59861 70 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 DEFB1P60022 68 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 TMEM170BQ5T4T1 132 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 COPS9Q8WXC6 57 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 STAB2Q8WWQ8 2551 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 DNAH1Q9P2D7 4330 aa3.79□□□□□ -1.8
CAPN3-217ENST00000567817 TRAV12-2A0A075B6T6 113 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms