RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
COMMD4-220ENST00000567720 UBE2D4Q9Y2X8 147 aa11.36□□□□□ -0.59
COMMD4-220ENST00000567720 RYR1P21817 5038 aa11.36□□□□□ -0.59
COMMD4-220ENST00000567720 IGKV3OR2-268A0A0C4DH90 116 aa11.35□□□□□ -0.59
COMMD4-220ENST00000567720 LOC389332A0A1B0GUA5 103 aa11.35□□□□□ -0.59
COMMD4-220ENST00000567720 MT-ND6P03923 174 aa11.35□□□□□ -0.59
COMMD4-220ENST00000567720 RPL39P62891 51 aaKnown RBP11.35□□□□□ -0.59
COMMD4-220ENST00000567720 COX19Q49B96 90 aa11.35□□□□□ -0.59
COMMD4-220ENST00000567720 YPEL4Q96NS1 127 aa11.35□□□□□ -0.59
COMMD4-220ENST00000567720 TMEM101Q96IK0 257 aa11.34□□□□□ -0.59
COMMD4-220ENST00000567720 MRPL18Q9H0U6 180 aaKnown RBP11.34□□□□□ -0.59
COMMD4-220ENST00000567720 HERC2O95714 4834 aa11.34□□□□□ -0.59
COMMD4-220ENST00000567720 TRAV8-4A0A0B4J246 113 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 CDPF1Q6NVV7 123 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 Q6ZUT4 128 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 CBLN2Q8IUK8 224 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 Q8N8P6 123 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 CDC42SE2Q9NRR3 84 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 DNAH8Q96JB1 4490 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 HSPG2P98160 4391 aa11.33□□□□□ -0.6
COMMD4-220ENST00000567720 TIMM21Q9BVV7 248 aa11.32□□□□□ -0.6
COMMD4-220ENST00000567720 CSDC2Q9Y534 153 aaKnown RBP11.32□□□□□ -0.6
COMMD4-220ENST00000567720 RNASE13Q5GAN3 156 aaKnown RBP11.31□□□□□ -0.6
COMMD4-220ENST00000567720 ZNF664Q8N3J9 261 aa11.31□□□□□ -0.6
COMMD4-220ENST00000567720 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
COMMD4-220ENST00000567720 ALKBH7Q9BT30 221 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-220ENST00000567720 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-220ENST00000567720 USP17L23D6RBM5 183 aa11.3□□□□□ -0.6
COMMD4-220ENST00000567720 RAB5AP20339 215 aa11.3□□□□□ -0.6
COMMD4-220ENST00000567720 IFI27P40305 119 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-220ENST00000567720 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
COMMD4-220ENST00000567720 NTN5Q8WTR8 489 aaPredicted RBP11.3□□□□□ -0.6
COMMD4-220ENST00000567720 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
COMMD4-220ENST00000567720 PGPEP1Q9NXJ5 209 aa11.3□□□□□ -0.6
COMMD4-220ENST00000567720 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
COMMD4-220ENST00000567720 SMAGPQ0VAQ4 97 aa11.29□□□□□ -0.6
COMMD4-220ENST00000567720 DGAT2L7PQ6IED9 249 aa11.29□□□□□ -0.6
COMMD4-220ENST00000567720 CHCHD10Q8WYQ3 142 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-220ENST00000567720 NXT2Q9NPJ8 142 aaKnown RBP11.29□□□□□ -0.6
COMMD4-220ENST00000567720 SPANXA1Q9NS26 97 aa11.29□□□□□ -0.6
COMMD4-220ENST00000567720 LINC00959A0A1B0GUT2 108 aa11.28□□□□□ -0.6
COMMD4-220ENST00000567720 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
COMMD4-220ENST00000567720 TRAPPC1Q9Y5R8 145 aa11.28□□□□□ -0.6
COMMD4-220ENST00000567720 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.61
COMMD4-220ENST00000567720 SMCO4Q9NRQ5 59 aa11.27□□□□□ -0.61
COMMD4-220ENST00000567720 K7EMI3 77 aa11.26□□□□□ -0.61
COMMD4-220ENST00000567720 CCL25O15444 150 aa11.26□□□□□ -0.61
COMMD4-220ENST00000567720 ORMDL2Q53FV1 153 aa11.26□□□□□ -0.61
COMMD4-220ENST00000567720 XCL1P47992 114 aa11.25□□□□□ -0.61
COMMD4-220ENST00000567720 KRTAP10-1P60331 282 aa11.25□□□□□ -0.61
COMMD4-220ENST00000567720 MRPS36P82909 103 aaKnown RBP11.25□□□□□ -0.61
COMMD4-220ENST00000567720 FOXI1Q12951 378 aa11.25□□□□□ -0.61
COMMD4-220ENST00000567720 C14orf177Q52M58 125 aa11.25□□□□□ -0.61
COMMD4-220ENST00000567720 C2orf66Q6UXQ4 117 aa11.25□□□□□ -0.61
COMMD4-220ENST00000567720 CYSLTR1Q9Y271 337 aa11.25□□□□□ -0.61
COMMD4-220ENST00000567720 IGLV4-3A0A075B6K6 122 aa11.24□□□□□ -0.61
COMMD4-220ENST00000567720 PRSS1P07477 247 aa11.24□□□□□ -0.61
COMMD4-220ENST00000567720 C15orf56Q8N910 161 aa11.24□□□□□ -0.61
COMMD4-220ENST00000567720 PYGO1Q9Y3Y4 419 aa11.24□□□□□ -0.61
COMMD4-220ENST00000567720 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
COMMD4-220ENST00000567720 GCSHP23434 173 aa11.23□□□□□ -0.61
COMMD4-220ENST00000567720 SS18Q15532 418 aa11.23□□□□□ -0.61
COMMD4-220ENST00000567720 C18orf32Q8TCD1 76 aa11.23□□□□□ -0.61
COMMD4-220ENST00000567720 TRAV13-1A0A0B4J241 112 aa11.22□□□□□ -0.61
COMMD4-220ENST00000567720 PRSS3P2Q8NHM4 247 aa11.22□□□□□ -0.61
COMMD4-220ENST00000567720 LINC01620Q4KN68 170 aa11.21□□□□□ -0.61
COMMD4-220ENST00000567720 URB1-AS1Q96HZ7 61 aa11.21□□□□□ -0.61
COMMD4-220ENST00000567720 IFITM10A6NMD0 228 aa11.2□□□□□ -0.62
COMMD4-220ENST00000567720 C1orf196B1AJZ1 125 aa11.2□□□□□ -0.62
COMMD4-220ENST00000567720 CDK2AP2O75956 126 aa11.2□□□□□ -0.62
COMMD4-220ENST00000567720 CD164L2Q6UWJ8 174 aa11.2□□□□□ -0.62
COMMD4-220ENST00000567720 LINC00173Q6ZV60 143 aa11.2□□□□□ -0.62
COMMD4-220ENST00000567720 TMEM141Q96I45 108 aa11.2□□□□□ -0.62
COMMD4-220ENST00000567720 hDV102S1A0JD36 115 aa11.19□□□□□ -0.62
COMMD4-220ENST00000567720 IGIPA6NJ69 53 aa11.19□□□□□ -0.62
COMMD4-220ENST00000567720 FA2HQ7L5A8 372 aa11.19□□□□□ -0.62
COMMD4-220ENST00000567720 TOMM6Q96B49 74 aa11.19□□□□□ -0.62
COMMD4-220ENST00000567720 HIGD2BQ4VC39 106 aa11.18□□□□□ -0.62
COMMD4-220ENST00000567720 GVQW2A0A096LPI5 108 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-220ENST00000567720 SCO1O75880 301 aa11.17□□□□□ -0.62
COMMD4-220ENST00000567720 ZC2HC1BQ5TFG8 222 aa11.17□□□□□ -0.62
COMMD4-220ENST00000567720 TIMM17AQ99595 171 aa11.17□□□□□ -0.62
COMMD4-220ENST00000567720 A0A096LNJ9 63 aa11.16□□□□□ -0.62
COMMD4-220ENST00000567720 NPSP0C0P6 89 aa11.16□□□□□ -0.62
COMMD4-220ENST00000567720 CNBPP62633 177 aaKnown RBP11.16□□□□□ -0.62
COMMD4-220ENST00000567720 TEX43Q6ZNM6 134 aa11.16□□□□□ -0.62
COMMD4-220ENST00000567720 AMELXQ99217 191 aa11.16□□□□□ -0.62
COMMD4-220ENST00000567720 AP5S1Q9NUS5 200 aa11.16□□□□□ -0.62
COMMD4-220ENST00000567720 COLCA2A8K830 154 aa11.15□□□□□ -0.62
COMMD4-220ENST00000567720 SLPIP03973 132 aa11.15□□□□□ -0.62
COMMD4-220ENST00000567720 G0S2P27469 103 aa11.15□□□□□ -0.62
COMMD4-220ENST00000567720 CFAP161Q6P656 301 aa11.15□□□□□ -0.62
COMMD4-220ENST00000567720 Q6ZN92 141 aa11.15□□□□□ -0.62
COMMD4-220ENST00000567720 IGHV1-58A0A0C4DH39 117 aa11.14□□□□□ -0.63
COMMD4-220ENST00000567720 COX7A2LO14548 114 aa11.14□□□□□ -0.63
COMMD4-220ENST00000567720 UBE2D1P51668 147 aa11.14□□□□□ -0.63
COMMD4-220ENST00000567720 HAMPP81172 84 aa11.14□□□□□ -0.63
COMMD4-220ENST00000567720 Q6ZSA8 131 aa11.14□□□□□ -0.63
COMMD4-220ENST00000567720 FAM30AQ9NZY2 134 aa11.14□□□□□ -0.63
COMMD4-220ENST00000567720 FAT1Q14517 4588 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms